| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is bccA [H]
Identifier: 158317658
GI number: 158317658
Start: 7186404
End: 7188167
Strand: Direct
Name: bccA [H]
Synonym: Franean1_5916
Alternate gene names: 158317658
Gene position: 7186404-7188167 (Clockwise)
Preceding gene: 158317657
Following gene: 158317659
Centisome position: 80.01
GC content: 72.34
Gene sequence:
>1764_bases GTGCGTAAGATCCTCATCGCCAACCGGGGGGAAATTGCCGTCCGGGTGGCGCGGGCCTGCCGCGACGCGGGATATTCAAG CGTCGCCGTGTATGCGGAGCCCGACATCGACGCCATGCATGTCCGGGTCGCGGACGAGGCGTACGCGCTGGGCGGGACAA CGCCCGGCGACTCGTACCTGAGAATCGACAAGATTCTTCAGGCGTGCGAGCTCTCCGGCGCGGACGCGGTGCACCCCGGC TACGGTTTCCTCTCCGAGAACGCGGATTTCGCCGAAGCCGTGATCTCCGCCGGGCTGACCTGGATCGGCCCGCCGCCCGA GGCCATTCGCCGGCTCGGTGACAAGACCGCCGCGCGCCACATCGCGCTGGCCGTCGGCGCCCCGCTCGCCCCGGGCACCG CCGACCCGGTCGCCGGGGTCGACGAGGTGGTCGCGTTCGCGAACGAGCACGGCCTGCCGGTCGCCATCAAGGCCGCCTTC GGCGGCGGCGGCCGTGGGCTCAAGGTCGCGTGGAGCGCCGAGGAGCTGCCCGAGCTGTTCGAGAGCGCGGTACGCGAGGC CGTCGCGGCCTTCGGCCGGGGCGAGTGCTTCGTCGAGCGCTACCTCGACCAGCCCCGCCACGTCGAGACCCAGATCCTGG CCGACACGCACGGCAACGTCGTCGTCGTCGGCACCCGGGACTGCTCCCTGCAGCGGCGCTACCAGAAGCTCGTCGAGGAG GCGCCCGCGCCGTTCCTCACCGAGGCGCAGAACACCGCCCTGTACGAGGCGTCCAAGTCGATCATCCACGAGGCCGGCTA CGTCGGCGCCGGCACGGTGGAGTTCCTCGTCGCCAAGGACGGGATGATCAGCTTCCTCGAGGTCAACACCCGGTTGCAGG TCGAGCACCCGGTGACCGAGGAGACCTCCGGCGTCGACCTGGTGCGGGCCCAGTTCCGCATCGCCGAGGGCGAGGCCCTC GACCCGGTCGACCCGACCCCGCGCGGCCACTCGATCGAGTTCCGCATCAACGGCGAGGACCCGGGTCGCAACTTCCTCCC GGCGCCGGGCACCGTGACCACGTTCACGGCTCCGGCCGGCCCCGGGGTCCGCCTGGACACCGGCGTCGAGAGCGGCAGCG TCATCGGTGGGGCGTTCGACTCGCTGCTCGCCAAGCTCATCGTCACCGGGGCGACCCGCCAGGAAGCCCTCGAGCGGGCC CGGCGCGCCCTCGACGAGATGGTCGTCGAGGGCATGGCCACCGCGCTGCCGTTCCACCGCGCGGTCGTACGCGACCCGGC GTTCGCGCCGGAGGCGGCGGACGAGCCGTTCCGGGTGCACAACCGCTGGATCGAGACCGAGTTCGACAACACGATCCCGC CGTTCGCCGGCGGCACCGACGCCGACACCGAGACCGACCCGCGGGAGACCGTGGTCGTCGAGGTCGGTGGCAAGCGGCTG GAGGTCGTCCTGCCCGCCGGGTTCGGCGCGGGCGGCGGCGCGGCCGTCTCCGCCGGTGCCGCGGCACCCAGGCGGCGCTC GGCGAGCAAGGCCGCGGCCAAGGTCACCGGCGACGCGCTGACCAGCCCGATGCAGGGCACCATCGTCAAGGTCGCGGTCA GCGACGGCGACACCGTCGAGGCCGGCGACCTGATCGTCGTCCTCGAGGCGATGAAGATGGAGCAGCCCATCAACGCGCAC CGGGCCGGGACCGTCGGCGGGCTCGCGGCAGCGGTCGGGGCTGTCGTGACCAGCGGTGCCATTCTCTGCGAGATCAAGGA CTGA
Upstream 100 bases:
>100_bases CAGGTCTTTCCCACCCTCGCCGGCAGAGCCGGAATGGCAAAGAAGAAATATGGTGCGGCCCGACTCGCCTAGACTCAGGC CGGACGAGGACGGGAGGAAC
Downstream 100 bases:
>100_bases CCGAACGACGCCCACCGGCGGCGTTCCCCGGACGGGGAGCGCCGCCGCCGCCGTTTCCGACACGGCCGCGATGGCGGTGG CGGCCATCCGCGATCAGCGC
Product: carbamoyl-phosphate synthase L chain ATP-binding
Products: NA
Alternate protein names: Biotin carboxylase; Biotin carboxyl carrier protein; BCCP [H]
Number of amino acids: Translated: 587; Mature: 587
Protein sequence:
>587_residues MRKILIANRGEIAVRVARACRDAGYSSVAVYAEPDIDAMHVRVADEAYALGGTTPGDSYLRIDKILQACELSGADAVHPG YGFLSENADFAEAVISAGLTWIGPPPEAIRRLGDKTAARHIALAVGAPLAPGTADPVAGVDEVVAFANEHGLPVAIKAAF GGGGRGLKVAWSAEELPELFESAVREAVAAFGRGECFVERYLDQPRHVETQILADTHGNVVVVGTRDCSLQRRYQKLVEE APAPFLTEAQNTALYEASKSIIHEAGYVGAGTVEFLVAKDGMISFLEVNTRLQVEHPVTEETSGVDLVRAQFRIAEGEAL DPVDPTPRGHSIEFRINGEDPGRNFLPAPGTVTTFTAPAGPGVRLDTGVESGSVIGGAFDSLLAKLIVTGATRQEALERA RRALDEMVVEGMATALPFHRAVVRDPAFAPEAADEPFRVHNRWIETEFDNTIPPFAGGTDADTETDPRETVVVEVGGKRL EVVLPAGFGAGGGAAVSAGAAAPRRRSASKAAAKVTGDALTSPMQGTIVKVAVSDGDTVEAGDLIVVLEAMKMEQPINAH RAGTVGGLAAAVGAVVTSGAILCEIKD
Sequences:
>Translated_587_residues MRKILIANRGEIAVRVARACRDAGYSSVAVYAEPDIDAMHVRVADEAYALGGTTPGDSYLRIDKILQACELSGADAVHPG YGFLSENADFAEAVISAGLTWIGPPPEAIRRLGDKTAARHIALAVGAPLAPGTADPVAGVDEVVAFANEHGLPVAIKAAF GGGGRGLKVAWSAEELPELFESAVREAVAAFGRGECFVERYLDQPRHVETQILADTHGNVVVVGTRDCSLQRRYQKLVEE APAPFLTEAQNTALYEASKSIIHEAGYVGAGTVEFLVAKDGMISFLEVNTRLQVEHPVTEETSGVDLVRAQFRIAEGEAL DPVDPTPRGHSIEFRINGEDPGRNFLPAPGTVTTFTAPAGPGVRLDTGVESGSVIGGAFDSLLAKLIVTGATRQEALERA RRALDEMVVEGMATALPFHRAVVRDPAFAPEAADEPFRVHNRWIETEFDNTIPPFAGGTDADTETDPRETVVVEVGGKRL EVVLPAGFGAGGGAAVSAGAAAPRRRSASKAAAKVTGDALTSPMQGTIVKVAVSDGDTVEAGDLIVVLEAMKMEQPINAH RAGTVGGLAAAVGAVVTSGAILCEIKD >Mature_587_residues MRKILIANRGEIAVRVARACRDAGYSSVAVYAEPDIDAMHVRVADEAYALGGTTPGDSYLRIDKILQACELSGADAVHPG YGFLSENADFAEAVISAGLTWIGPPPEAIRRLGDKTAARHIALAVGAPLAPGTADPVAGVDEVVAFANEHGLPVAIKAAF GGGGRGLKVAWSAEELPELFESAVREAVAAFGRGECFVERYLDQPRHVETQILADTHGNVVVVGTRDCSLQRRYQKLVEE APAPFLTEAQNTALYEASKSIIHEAGYVGAGTVEFLVAKDGMISFLEVNTRLQVEHPVTEETSGVDLVRAQFRIAEGEAL DPVDPTPRGHSIEFRINGEDPGRNFLPAPGTVTTFTAPAGPGVRLDTGVESGSVIGGAFDSLLAKLIVTGATRQEALERA RRALDEMVVEGMATALPFHRAVVRDPAFAPEAADEPFRVHNRWIETEFDNTIPPFAGGTDADTETDPRETVVVEVGGKRL EVVLPAGFGAGGGAAVSAGAAAPRRRSASKAAAKVTGDALTSPMQGTIVKVAVSDGDTVEAGDLIVVLEAMKMEQPINAH RAGTVGGLAAAVGAVVTSGAILCEIKD
Specific function: This protein carries two functions:biotin carboxyl carrier protein and biotin carboxyltransferase [H]
COG id: COG4770
COG function: function code I; Acetyl/propionyl-CoA carboxylase, alpha subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 biotinyl-binding domain [H]
Homologues:
Organism=Homo sapiens, GI106049528, Length=444, Percent_Identity=46.1711711711712, Blast_Score=376, Evalue=1e-104, Organism=Homo sapiens, GI106049295, Length=444, Percent_Identity=46.1711711711712, Blast_Score=376, Evalue=1e-104, Organism=Homo sapiens, GI106049292, Length=444, Percent_Identity=46.1711711711712, Blast_Score=376, Evalue=1e-104, Organism=Homo sapiens, GI116805327, Length=433, Percent_Identity=44.8036951501155, Blast_Score=367, Evalue=1e-101, Organism=Homo sapiens, GI295821183, Length=632, Percent_Identity=35.6012658227848, Blast_Score=340, Evalue=2e-93, Organism=Homo sapiens, GI65506442, Length=430, Percent_Identity=42.3255813953488, Blast_Score=339, Evalue=3e-93, Organism=Homo sapiens, GI189095269, Length=430, Percent_Identity=42.3255813953488, Blast_Score=339, Evalue=4e-93, Organism=Homo sapiens, GI38679971, Length=472, Percent_Identity=32.8389830508475, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI38679974, Length=472, Percent_Identity=32.8389830508475, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI38679960, Length=472, Percent_Identity=32.8389830508475, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI38679977, Length=472, Percent_Identity=32.8389830508475, Blast_Score=231, Evalue=2e-60, Organism=Homo sapiens, GI38679967, Length=472, Percent_Identity=32.8389830508475, Blast_Score=231, Evalue=2e-60, Organism=Homo sapiens, GI134142062, Length=476, Percent_Identity=32.3529411764706, Blast_Score=213, Evalue=3e-55, Organism=Escherichia coli, GI1789654, Length=431, Percent_Identity=45.2436194895592, Blast_Score=348, Evalue=4e-97, Organism=Escherichia coli, GI1786216, Length=326, Percent_Identity=24.2331288343558, Blast_Score=67, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17562816, Length=444, Percent_Identity=45.7207207207207, Blast_Score=374, Evalue=1e-103, Organism=Caenorhabditis elegans, GI17567343, Length=431, Percent_Identity=42.92343387471, Blast_Score=343, Evalue=2e-94, Organism=Caenorhabditis elegans, GI71987519, Length=433, Percent_Identity=42.0323325635104, Blast_Score=331, Evalue=6e-91, Organism=Caenorhabditis elegans, GI133931226, Length=457, Percent_Identity=28.0087527352298, Blast_Score=185, Evalue=7e-47, Organism=Caenorhabditis elegans, GI71997163, Length=474, Percent_Identity=29.1139240506329, Blast_Score=178, Evalue=7e-45, Organism=Caenorhabditis elegans, GI71997168, Length=474, Percent_Identity=29.3248945147679, Blast_Score=178, Evalue=7e-45, Organism=Saccharomyces cerevisiae, GI6319695, Length=435, Percent_Identity=44.8275862068966, Blast_Score=365, Evalue=1e-101, Organism=Saccharomyces cerevisiae, GI6321376, Length=435, Percent_Identity=44.8275862068966, Blast_Score=355, Evalue=1e-98, Organism=Saccharomyces cerevisiae, GI6319685, Length=453, Percent_Identity=41.5011037527594, Blast_Score=330, Evalue=3e-91, Organism=Saccharomyces cerevisiae, GI6323863, Length=435, Percent_Identity=31.7241379310345, Blast_Score=204, Evalue=2e-53, Organism=Saccharomyces cerevisiae, GI6324343, Length=483, Percent_Identity=31.4699792960663, Blast_Score=201, Evalue=2e-52, Organism=Drosophila melanogaster, GI24652212, Length=444, Percent_Identity=46.6216216216216, Blast_Score=384, Evalue=1e-106, Organism=Drosophila melanogaster, GI24652210, Length=444, Percent_Identity=46.6216216216216, Blast_Score=384, Evalue=1e-106, Organism=Drosophila melanogaster, GI24652214, Length=444, Percent_Identity=46.6216216216216, Blast_Score=384, Evalue=1e-106, Organism=Drosophila melanogaster, GI19921944, Length=444, Percent_Identity=46.6216216216216, Blast_Score=384, Evalue=1e-106, Organism=Drosophila melanogaster, GI24652216, Length=444, Percent_Identity=46.6216216216216, Blast_Score=384, Evalue=1e-106, Organism=Drosophila melanogaster, GI281363050, Length=444, Percent_Identity=46.6216216216216, Blast_Score=384, Evalue=1e-106, Organism=Drosophila melanogaster, GI24652224, Length=444, Percent_Identity=46.6216216216216, Blast_Score=384, Evalue=1e-106, Organism=Drosophila melanogaster, GI24652222, Length=444, Percent_Identity=46.6216216216216, Blast_Score=384, Evalue=1e-106, Organism=Drosophila melanogaster, GI24652220, Length=444, Percent_Identity=46.6216216216216, Blast_Score=384, Evalue=1e-106, Organism=Drosophila melanogaster, GI24652218, Length=444, Percent_Identity=46.6216216216216, Blast_Score=384, Evalue=1e-106, Organism=Drosophila melanogaster, GI24651757, Length=459, Percent_Identity=41.6122004357298, Blast_Score=348, Evalue=5e-96, Organism=Drosophila melanogaster, GI24651759, Length=421, Percent_Identity=40.6175771971496, Blast_Score=310, Evalue=3e-84, Organism=Drosophila melanogaster, GI161076409, Length=470, Percent_Identity=31.9148936170213, Blast_Score=202, Evalue=5e-52, Organism=Drosophila melanogaster, GI24586458, Length=474, Percent_Identity=32.2784810126582, Blast_Score=202, Evalue=5e-52, Organism=Drosophila melanogaster, GI161076407, Length=470, Percent_Identity=31.9148936170213, Blast_Score=202, Evalue=6e-52, Organism=Drosophila melanogaster, GI24586460, Length=470, Percent_Identity=31.9148936170213, Blast_Score=202, Evalue=6e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR001882 - InterPro: IPR011764 - InterPro: IPR005482 - InterPro: IPR000089 - InterPro: IPR005479 - InterPro: IPR005481 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 - InterPro: IPR011053 [H]
Pfam domain/function: PF02785 Biotin_carb_C; PF00364 Biotin_lipoyl; PF00289 CPSase_L_chain; PF02786 CPSase_L_D2 [H]
EC number: =6.3.4.14 [H]
Molecular weight: Translated: 61442; Mature: 61442
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: PS50975 ATP_GRASP ; PS00867 CPSASE_2 ; PS50979 BC ; PS50968 BIOTINYL_LIPOYL ; PS00188 BIOTIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKILIANRGEIAVRVARACRDAGYSSVAVYAEPDIDAMHVRVADEAYALGGTTPGDSYL CCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCEEECCCCCCCCCHH RIDKILQACELSGADAVHPGYGFLSENADFAEAVISAGLTWIGPPPEAIRRLGDKTAARH HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHE IALAVGAPLAPGTADPVAGVDEVVAFANEHGLPVAIKAAFGGGGRGLKVAWSAEELPELF EEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEECHHHHHHHH ESAVREAVAAFGRGECFVERYLDQPRHVETQILADTHGNVVVVGTRDCSLQRRYQKLVEE HHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHH APAPFLTEAQNTALYEASKSIIHEAGYVGAGTVEFLVAKDGMISFLEVNTRLQVEHPVTE CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEECCEEEECCCCCC ETSGVDLVRAQFRIAEGEALDPVDPTPRGHSIEFRINGEDPGRNFLPAPGTVTTFTAPAG CCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCC PGVRLDTGVESGSVIGGAFDSLLAKLIVTGATRQEALERARRALDEMVVEGMATALPFHR CCCEEECCCCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVVRDPAFAPEAADEPFRVHNRWIETEFDNTIPPFAGGTDADTETDPRETVVVEVGGKRL HHHCCCCCCCCCCCCCHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEE EVVLPAGFGAGGGAAVSAGAAAPRRRSASKAAAKVTGDALTSPMQGTIVKVAVSDGDTVE EEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHCCCCCCEEEEEEECCCCEEC AGDLIVVLEAMKMEQPINAHRAGTVGGLAAAVGAVVTSGAILCEIKD CCCEEEEEEHHHCCCCCCHHCCCCHHHHHHHHHHHHHCCEEEEEECC >Mature Secondary Structure MRKILIANRGEIAVRVARACRDAGYSSVAVYAEPDIDAMHVRVADEAYALGGTTPGDSYL CCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCEEECCCCCCCCCHH RIDKILQACELSGADAVHPGYGFLSENADFAEAVISAGLTWIGPPPEAIRRLGDKTAARH HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHE IALAVGAPLAPGTADPVAGVDEVVAFANEHGLPVAIKAAFGGGGRGLKVAWSAEELPELF EEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEECHHHHHHHH ESAVREAVAAFGRGECFVERYLDQPRHVETQILADTHGNVVVVGTRDCSLQRRYQKLVEE HHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHH APAPFLTEAQNTALYEASKSIIHEAGYVGAGTVEFLVAKDGMISFLEVNTRLQVEHPVTE CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEECCEEEECCCCCC ETSGVDLVRAQFRIAEGEALDPVDPTPRGHSIEFRINGEDPGRNFLPAPGTVTTFTAPAG CCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCC PGVRLDTGVESGSVIGGAFDSLLAKLIVTGATRQEALERARRALDEMVVEGMATALPFHR CCCEEECCCCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVVRDPAFAPEAADEPFRVHNRWIETEFDNTIPPFAGGTDADTETDPRETVVVEVGGKRL HHHCCCCCCCCCCCCCHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEE EVVLPAGFGAGGGAAVSAGAAAPRRRSASKAAAKVTGDALTSPMQGTIVKVAVSDGDTVE EEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHCCCCCCEEEEEEECCCCEEC AGDLIVVLEAMKMEQPINAHRAGTVGGLAAAVGAVVTSGAILCEIKD CCCEEEEEEHHHCCCCCCHHCCCCHHHHHHHHHHHHHCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7909542; 11234002 [H]