| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317653
Identifier: 158317653
GI number: 158317653
Start: 7182041
End: 7182721
Strand: Direct
Name: 158317653
Synonym: Franean1_5911
Alternate gene names: NA
Gene position: 7182041-7182721 (Clockwise)
Preceding gene: 158317652
Following gene: 158317656
Centisome position: 79.96
GC content: 78.71
Gene sequence:
>681_bases ATGAGGCGGCTCCTGCCGGCGGGCGGGCGGACGCGCGTCCTGATCCCCGGCGGGCTGGCCCTGGCCGCCGTCGCCACGGC GGGCGTGCTGATCGCCCGCGCGGCCGGCGGGCCGTCCACCTCGGCTGAACCGGACACCGGGAGATCACAGCCGCCGGCGA CGGTCTCCGCGCCACCGGGCCCCCGGGGCACGAGTACCTCGCCCGAGCCGGCGGACCTGGACGGCCCTGAGCGCGAGCTG GCGGCCCGACTGTCCTCGTTCGAGATCACCGGCTGCCGGGGGGCGACCACCGAGGCCGCCGCCCCGGGCGGATCGGGCGA CCCGGCCGACCCGCGGGCGGCCGGCGTCCAGGCCGCGCTGCGGTGCGTGCCGGGGGTGGCGGCCTCCGGGGCGCCGCCGG CAGACGTCCTCGTGCTCGGCTACATCGATGAGGCGGCCGTGGCCTCCGATGCGGCCCGGCGCGCGGCGGCGATCGTGGAC GGCGGCTCCTGCGAGGCGGGCCAGACCAGCACCGAGGCGTACCTGCTGCCGTCCCGGCGCACGGGCACCTTCGTCTGCCA GGCCGCCCCCGGCCGCTTCGCCGCCTACTGGACGATCGACAGCGAGCGGGTGGCGTTCGTCGCGCAGAGCGACGACCCGG CCGGGCTGATCACCTGGTGGCGCGGCTTCGACCCGCTCTGA
Upstream 100 bases:
>100_bases CCTTCTGGACCATCGACGATGACCTGGTCGCGTTCTCCGCGTCGGATTCCGACCCGAAGCGGCTGGTCACCTGGTGGCAG ACGTTTGACCCCATCCGCCG
Downstream 100 bases:
>100_bases GCCGTGGCCCGGTGGTGATCCGGTCAGCCGCCGGAGCGGCGGCGGCCGTCCGCCGCCTCGGCCAGCTCGTACAGCGTGGC GTGCACATCCTCGACCCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MRRLLPAGGRTRVLIPGGLALAAVATAGVLIARAAGGPSTSAEPDTGRSQPPATVSAPPGPRGTSTSPEPADLDGPEREL AARLSSFEITGCRGATTEAAAPGGSGDPADPRAAGVQAALRCVPGVAASGAPPADVLVLGYIDEAAVASDAARRAAAIVD GGSCEAGQTSTEAYLLPSRRTGTFVCQAAPGRFAAYWTIDSERVAFVAQSDDPAGLITWWRGFDPL
Sequences:
>Translated_226_residues MRRLLPAGGRTRVLIPGGLALAAVATAGVLIARAAGGPSTSAEPDTGRSQPPATVSAPPGPRGTSTSPEPADLDGPEREL AARLSSFEITGCRGATTEAAAPGGSGDPADPRAAGVQAALRCVPGVAASGAPPADVLVLGYIDEAAVASDAARRAAAIVD GGSCEAGQTSTEAYLLPSRRTGTFVCQAAPGRFAAYWTIDSERVAFVAQSDDPAGLITWWRGFDPL >Mature_226_residues MRRLLPAGGRTRVLIPGGLALAAVATAGVLIARAAGGPSTSAEPDTGRSQPPATVSAPPGPRGTSTSPEPADLDGPEREL AARLSSFEITGCRGATTEAAAPGGSGDPADPRAAGVQAALRCVPGVAASGAPPADVLVLGYIDEAAVASDAARRAAAIVD GGSCEAGQTSTEAYLLPSRRTGTFVCQAAPGRFAAYWTIDSERVAFVAQSDDPAGLITWWRGFDPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22618; Mature: 22618
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLLPAGGRTRVLIPGGLALAAVATAGVLIARAAGGPSTSAEPDTGRSQPPATVSAPPG CCCCCCCCCCEEEEECCCHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCEEECCCC PRGTSTSPEPADLDGPERELAARLSSFEITGCRGATTEAAAPGGSGDPADPRAAGVQAAL CCCCCCCCCCCCCCCCHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHH RCVPGVAASGAPPADVLVLGYIDEAAVASDAARRAAAIVDGGSCEAGQTSTEAYLLPSRR HHCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHEEEEECCCCCCCCCCCCEEEEECCCC TGTFVCQAAPGRFAAYWTIDSERVAFVAQSDDPAGLITWWRGFDPL CCEEEEEECCCCEEEEEEECCCEEEEEECCCCCCEEEEEECCCCCC >Mature Secondary Structure MRRLLPAGGRTRVLIPGGLALAAVATAGVLIARAAGGPSTSAEPDTGRSQPPATVSAPPG CCCCCCCCCCEEEEECCCHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCEEECCCC PRGTSTSPEPADLDGPERELAARLSSFEITGCRGATTEAAAPGGSGDPADPRAAGVQAAL CCCCCCCCCCCCCCCCHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHH RCVPGVAASGAPPADVLVLGYIDEAAVASDAARRAAAIVDGGSCEAGQTSTEAYLLPSRR HHCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHEEEEECCCCCCCCCCCCEEEEECCCC TGTFVCQAAPGRFAAYWTIDSERVAFVAQSDDPAGLITWWRGFDPL CCEEEEEECCCCEEEEEEECCCEEEEEECCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA