| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317646
Identifier: 158317646
GI number: 158317646
Start: 7173151
End: 7174116
Strand: Direct
Name: 158317646
Synonym: Franean1_5904
Alternate gene names: NA
Gene position: 7173151-7174116 (Clockwise)
Preceding gene: 158317645
Following gene: 158317647
Centisome position: 79.86
GC content: 76.71
Gene sequence:
>966_bases TTGGACGTCCGGTTCGTCCCAGCACCGTCGATCCTTCCCGGCGGCTCCGTGCCGCCCGACGCGCCGCCCGCGCGGTTCCC CGGGGTGGCCGCCGCGCTCGCCGCGCGGCTCGCGCGCGACCCGGCGCGTCCGATGATCACTTTTTACGACGACGCCACCG GCGAGCGGGTGGAGTTCTCCACCACGACGCTGGACAACTGGGTGGCGAAGACGGCGAACCTGCTCGGTGACACGGTCGGC CTCACGCCCGGGGACGCGGTGGGCGTCGACCTGCCGGCGCACTGGACGACCTGCGTCATCCTGCTGGCGGCCTGGTCGGC GGGGCTCGACGTGCATGTCGCCGTCGGCCCGGAGACGCCGGACGGCGGCCCCGGCGGCAAGGGAGCCGAGGGAGCGGAGG GTGCCGGGCCGCCGGTCACCGGCGCCGGCGGCTACACCGGCGCCGGCACCGCTCCGGAGGAGCTCGGTGTCGTCTTCGTC AGCGAGGACCGGCTCGAGATCGCCACCGGACTGGGCGTCGACGAGATCGTCGCGCTGTCGCTGCGTCCGCTCGGTGGCCG GCTGCGGCGTCCGGTGCCGGGCGTGCTCGACTACGCGGTCGAGGTGCCGCCGCACGGCGACCGCTACGCGGCGCCGCCGC CGCCCGCGGGCCAGGCGGAGCTGATCCGCATCGCCGAGAGCGCCGCCCGCCGCGCCGGGCTGGGCCCGGACGACCGGATC CTCACCGCGGCCGGGCCCGCCACCGCCGCCGGCCTGCTCACCGGGATCCTCATCCCGCTGGTCAGCGGCGCGTCGGTCGT GCTGTGCCGCAACCTGGACAGCATCGAGCCGGCGGCGCTGGCCCGCCGGGCCGACAGCGAACGGATCACCGCGGTGGACT GGTCCGTGCCGGGGCCACTCACCGAAGCCCTGCCGGCCGGGGTTCGTCCCATCGACCCCGTCGACGCGCATGCCCGGCGG CGGTAG
Upstream 100 bases:
>100_bases TACCGCCCGCGGCGGATCGCCGGCGCTCAGCTCGCCGGAACCCGACCACCGCCGGGCCCACCCGCCCGCCGACGAACGAC CGGATTGGAGACCGGAACCG
Downstream 100 bases:
>100_bases CGACGACGTGACCCGGCGGCCCGCGGTCCCCCGGCCGCTCATGACGGGCGGCCTGCCGGCCGTCCGCCGCATCGGCGTGG TCGGGACGGGCTACCTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MDVRFVPAPSILPGGSVPPDAPPARFPGVAAALAARLARDPARPMITFYDDATGERVEFSTTTLDNWVAKTANLLGDTVG LTPGDAVGVDLPAHWTTCVILLAAWSAGLDVHVAVGPETPDGGPGGKGAEGAEGAGPPVTGAGGYTGAGTAPEELGVVFV SEDRLEIATGLGVDEIVALSLRPLGGRLRRPVPGVLDYAVEVPPHGDRYAAPPPPAGQAELIRIAESAARRAGLGPDDRI LTAAGPATAAGLLTGILIPLVSGASVVLCRNLDSIEPAALARRADSERITAVDWSVPGPLTEALPAGVRPIDPVDAHARR R
Sequences:
>Translated_321_residues MDVRFVPAPSILPGGSVPPDAPPARFPGVAAALAARLARDPARPMITFYDDATGERVEFSTTTLDNWVAKTANLLGDTVG LTPGDAVGVDLPAHWTTCVILLAAWSAGLDVHVAVGPETPDGGPGGKGAEGAEGAGPPVTGAGGYTGAGTAPEELGVVFV SEDRLEIATGLGVDEIVALSLRPLGGRLRRPVPGVLDYAVEVPPHGDRYAAPPPPAGQAELIRIAESAARRAGLGPDDRI LTAAGPATAAGLLTGILIPLVSGASVVLCRNLDSIEPAALARRADSERITAVDWSVPGPLTEALPAGVRPIDPVDAHARR R >Mature_321_residues MDVRFVPAPSILPGGSVPPDAPPARFPGVAAALAARLARDPARPMITFYDDATGERVEFSTTTLDNWVAKTANLLGDTVG LTPGDAVGVDLPAHWTTCVILLAAWSAGLDVHVAVGPETPDGGPGGKGAEGAEGAGPPVTGAGGYTGAGTAPEELGVVFV SEDRLEIATGLGVDEIVALSLRPLGGRLRRPVPGVLDYAVEVPPHGDRYAAPPPPAGQAELIRIAESAARRAGLGPDDRI LTAAGPATAAGLLTGILIPLVSGASVVLCRNLDSIEPAALARRADSERITAVDWSVPGPLTEALPAGVRPIDPVDAHARR R
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32608; Mature: 32608
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVRFVPAPSILPGGSVPPDAPPARFPGVAAALAARLARDPARPMITFYDDATGERVEFS CCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEE TTTLDNWVAKTANLLGDTVGLTPGDAVGVDLPAHWTTCVILLAAWSAGLDVHVAVGPETP HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCC DGGPGGKGAEGAEGAGPPVTGAGGYTGAGTAPEELGVVFVSEDRLEIATGLGVDEIVALS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCEEEEECCCEEHHHCCCHHHHHHHH LRPLGGRLRRPVPGVLDYAVEVPPHGDRYAAPPPPAGQAELIRIAESAARRAGLGPDDRI CCCCCCHHCCCCCCHHHHEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCE LTAAGPATAAGLLTGILIPLVSGASVVLCRNLDSIEPAALARRADSERITAVDWSVPGPL EEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHCCCCCEEEEECCCCCCH TEALPAGVRPIDPVDAHARRR HHHHCCCCCCCCCCCHHHCCC >Mature Secondary Structure MDVRFVPAPSILPGGSVPPDAPPARFPGVAAALAARLARDPARPMITFYDDATGERVEFS CCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEE TTTLDNWVAKTANLLGDTVGLTPGDAVGVDLPAHWTTCVILLAAWSAGLDVHVAVGPETP HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCC DGGPGGKGAEGAEGAGPPVTGAGGYTGAGTAPEELGVVFVSEDRLEIATGLGVDEIVALS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCEEEEECCCEEHHHCCCHHHHHHHH LRPLGGRLRRPVPGVLDYAVEVPPHGDRYAAPPPPAGQAELIRIAESAARRAGLGPDDRI CCCCCCHHCCCCCCHHHHEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCE LTAAGPATAAGLLTGILIPLVSGASVVLCRNLDSIEPAALARRADSERITAVDWSVPGPL EEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHCCCCCEEEEECCCCCCH TEALPAGVRPIDPVDAHARRR HHHHCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA