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The map label for this gene is rfbA [H]

Identifier: 158317633

GI number: 158317633

Start: 7152520

End: 7153452

Strand: Direct

Name: rfbA [H]

Synonym: Franean1_5890

Alternate gene names: 158317633

Gene position: 7152520-7153452 (Clockwise)

Preceding gene: 158317630

Following gene: 158317634

Centisome position: 79.63

GC content: 65.92

Gene sequence:

>933_bases
ATGTCGAGGGTGGCTGATCTGTCCACGCTCCCGAAACCGGAGCCGACGCGCGGCGCTCCGGCGAACCGTCCGCGCGGGTC
CGGTGCGCGTCACGTCGACCATCGCAGCCGTGCGCAGACCCGGGTCCGCTGGGAGCTGCTGCGAAACCTGATCCGCAAGG
ACCTGAAGGTCAAGTACAAGGGATCGTCGCTCGGTTTCGCCTGGTCACTGGCGAATCCGCTGCTCCTCCTGGCCGTCTAC
ACCTTCGTCTTCCAGGTCGTTCTGAAAAGTGGGATCGACAACTTCGGCTTCTATCTGATGTCGGGACTGCTGGTCTGGAA
CGCGTTCTCAGGCAGTGTCTCGGCCGCCTGCGGCGCCGTGGTGGGCAATGCCAACCTGGTGAAAAAGGTGCGCTTCCCGC
TGCTGGTGCTGCCGCTGTCGGCGGTCGGCTTCTCCGCGGTGCACTTCGCGCTCCAGCTCGCGGTGCTCTTCGCCGTCATG
CTGGGGTTCGGCTACAGCCTGCTCGGGCCGGAGCTACTGCTGCTGATCCCGGCCGGCGCGGTGGCTCTGCTGTTCACCGT
GGCGCTGTCGGTGCTGGTGTCCGCGCTCAACGTCCGTTACCGCGACACCCAGCACCTGCTGGACGTCGCCCTGCTCGCCT
GGTTCTGGATCAACCCGATGGTCTACGCGTTCGGCCTGATCGAGAACAGGCTGAACGAGTGGACGTGGGTGTACATGCTC
AATCCGATGGCGGTCGTCGTGACCACCTTCCAGCGGGCGATCTACGATCCGCCCGAGGGGAACTCGACCGGCTCGGCGCC
GATCCTTGCCGATCTGGGGTACCGCTTCTACCTCGAACACCTGGCGATCGCCGGGCTCATCTCGCTGGCCGTGCTGTGGC
TGGGGCTGCGAGTGTTCCGGCGGCTGCAGGCCGACTTCGCCGAGGACCTCTAG

Upstream 100 bases:

>100_bases
ACGACACTCGAGGCCAACCGGTGACGGTTGCGCTGGGCGGAGGAGGGGCCGAGCACGGTGCGGGTCCGAGATGCACGCCC
GACGCGGGGAGAAGCAGGCC

Downstream 100 bases:

>100_bases
TGCCGTCGCAACCGCTCGCCCCGCCCCCGATGCAGCCCGCGCAACCGGCCGCCTCCGCGCCGTCGGCGCCGCCGGCACCG
GGCGCCCCGGTGGTCATCCG

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MSRVADLSTLPKPEPTRGAPANRPRGSGARHVDHRSRAQTRVRWELLRNLIRKDLKVKYKGSSLGFAWSLANPLLLLAVY
TFVFQVVLKSGIDNFGFYLMSGLLVWNAFSGSVSAACGAVVGNANLVKKVRFPLLVLPLSAVGFSAVHFALQLAVLFAVM
LGFGYSLLGPELLLLIPAGAVALLFTVALSVLVSALNVRYRDTQHLLDVALLAWFWINPMVYAFGLIENRLNEWTWVYML
NPMAVVVTTFQRAIYDPPEGNSTGSAPILADLGYRFYLEHLAIAGLISLAVLWLGLRVFRRLQADFAEDL

Sequences:

>Translated_310_residues
MSRVADLSTLPKPEPTRGAPANRPRGSGARHVDHRSRAQTRVRWELLRNLIRKDLKVKYKGSSLGFAWSLANPLLLLAVY
TFVFQVVLKSGIDNFGFYLMSGLLVWNAFSGSVSAACGAVVGNANLVKKVRFPLLVLPLSAVGFSAVHFALQLAVLFAVM
LGFGYSLLGPELLLLIPAGAVALLFTVALSVLVSALNVRYRDTQHLLDVALLAWFWINPMVYAFGLIENRLNEWTWVYML
NPMAVVVTTFQRAIYDPPEGNSTGSAPILADLGYRFYLEHLAIAGLISLAVLWLGLRVFRRLQADFAEDL
>Mature_309_residues
SRVADLSTLPKPEPTRGAPANRPRGSGARHVDHRSRAQTRVRWELLRNLIRKDLKVKYKGSSLGFAWSLANPLLLLAVYT
FVFQVVLKSGIDNFGFYLMSGLLVWNAFSGSVSAACGAVVGNANLVKKVRFPLLVLPLSAVGFSAVHFALQLAVLFAVML
GFGYSLLGPELLLLIPAGAVALLFTVALSVLVSALNVRYRDTQHLLDVALLAWFWINPMVYAFGLIENRLNEWTWVYMLN
PMAVVVTTFQRAIYDPPEGNSTGSAPILADLGYRFYLEHLAIAGLISLAVLWLGLRVFRRLQADFAEDL

Specific function: May form an ATP-driven O-antigen export apparatus, in association with rfbB [H]

COG id: COG1682

COG function: function code GM; ABC-type polysaccharide/polyol phosphate export systems, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 34204; Mature: 34073

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRVADLSTLPKPEPTRGAPANRPRGSGARHVDHRSRAQTRVRWELLRNLIRKDLKVKYK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEC
GSSLGFAWSLANPLLLLAVYTFVFQVVLKSGIDNFGFYLMSGLLVWNAFSGSVSAACGAV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
VGNANLVKKVRFPLLVLPLSAVGFSAVHFALQLAVLFAVMLGFGYSLLGPELLLLIPAGA
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHEEEECCHH
VALLFTVALSVLVSALNVRYRDTQHLLDVALLAWFWINPMVYAFGLIENRLNEWTWVYML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE
NPMAVVVTTFQRAIYDPPEGNSTGSAPILADLGYRFYLEHLAIAGLISLAVLWLGLRVFR
CHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLQADFAEDL
HHHHHHHHCC
>Mature Secondary Structure 
SRVADLSTLPKPEPTRGAPANRPRGSGARHVDHRSRAQTRVRWELLRNLIRKDLKVKYK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEC
GSSLGFAWSLANPLLLLAVYTFVFQVVLKSGIDNFGFYLMSGLLVWNAFSGSVSAACGAV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
VGNANLVKKVRFPLLVLPLSAVGFSAVHFALQLAVLFAVMLGFGYSLLGPELLLLIPAGA
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHEEEECCHH
VALLFTVALSVLVSALNVRYRDTQHLLDVALLAWFWINPMVYAFGLIENRLNEWTWVYML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE
NPMAVVVTTFQRAIYDPPEGNSTGSAPILADLGYRFYLEHLAIAGLISLAVLWLGLRVFR
CHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLQADFAEDL
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8626291 [H]