| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317629
Identifier: 158317629
GI number: 158317629
Start: 7141961
End: 7144069
Strand: Direct
Name: 158317629
Synonym: Franean1_5885
Alternate gene names: NA
Gene position: 7141961-7144069 (Clockwise)
Preceding gene: 158317628
Following gene: 158317630
Centisome position: 79.51
GC content: 70.84
Gene sequence:
>2109_bases GTGTCCGCGTCGCTGGCCGCCTCCCCCGCCGGCTACCCGGTCGGAGCGCGCTTCCGGCCGATCATGCTGCTGCGCTCGGC ACCGCTGCCGGTCTGGCTGATCACCGGGCTGTTCGCGGCGCTGCTCGCGAGCTGGTCGGTACTGGTGCCGCAGTACCACG CGCCCGACGAGCCGAACCACGTCGACGCGGTGATGCGGCTGGTCCAGGGCGCCGGATGGCCGCATCCCGGCCACGCGTTC GTCCGTCCCGACGGGGTCGGCACTATCGCCGCGTCACCCTACGGAACCGACGCGCTCCCCTACGACCTCGACTACGCCCC GATCGCCAAGGGCGACGCCACGCCGCGCGCCGACCGGCCGACCTGGGACGAGATGGGCGACACCCGCCAGCCTGACGGCG AGCCGCAGCCGCCCGGGGAGATCCAGCAGCTCGTTCAGCACCCACCGCTGTACTACTGGGTGGGCGCCGCCGTGCTCTGG GCGCTGCCCGGCGGCGACGGCGACGGCCTGCGCTGGGACGTCACCATCGGGATCCTGCGTCTGATGAGCGCGCTGATGGT GACGCCGATCCCGCTGCTCGCGTGGGCGGGGGCGCACCGGCTCAGCGACGGCAACCGGGTCGCGGCGACCTGCGCCGCGC TGGTGCCCCTGGCGATTCCGCAGTTCAGCCACATCGGATCGACCGTCAACAACGACAACCTGCTCGTGCTGACCGCGGGC CTGGCCACGGTGACGATCATCTACGTCCTGTGCGGGGACACGTCCCTGCGCACGGCCGCGTGGGCCGGGGTGTTCATCGG GCTCGCCCTGTTCTCGAAATCGCTGGCGATCGTGCTCGTGCCGATGGTGGCACTCGCCTACCTCGCCGCCTGGCGGCGCG CCCGGCGGGACGCCCACGCCCCACCCGCGCTGCCGCGGCGCGGCCCGGACGCCCCGTTCCTGCTCGCCGAGACCGGTCTC ATGACGGTGCCACCGGGCTCGACCCGGGCACCGTGGCGGCAGCTCCTGCTCGGCGGCGCGCTGATGATCGGGTTCGGTGG CTGGTGGTGGGTCGTCAACGCCGTCCGCTACCGGACCTTCCAGCCCGAGACCCCGGGATTCCCCCTCGGCAACTACGTGA ATGACTGGGGCGATTACACCGAGATCCTGACCAACGGGACGATCCTGCGCTGGTGGGGCTCGTTCGGCTGGTTCGAGTCG AACCTGCCGACGGAGTTCGTCCGCTCCGCGAGCGTCGCCGTGGTCGTTCTTTTCGCGCTGGCGATCATCCGGGGACGCAA CGGCCGGACGCGGGTGAATCTACTGTTCCTGCTGTGGCCGACAATCGGCCTGTTCGGGTTGATGACCCTGCAGTCGGCGC TGGCGTTCGCCGACCATCACCACGTCAGCGGGATCTCGGGGCGCTATCTGTACGCGGGCCTACCTTCGCTGGCGATCGGC GTGGGAATGGGCGTTCCGGCATTCGGCCGGCGGGCCTCCCGGGTCTTTCCCGCCCTTTTCTTCGTGGCCGCCGCGACGGC CCAGTGGTGGTCGATCAAAACCGTTCTTCCGTATTTCTGGAAGCCCCCTGGTGGCGATCTCGCCGACGCCTGGGACGCAA TGACGGCCTGGTCCCCCTGGCCACCGGCCGCCGCCGTCACCACGATGTGGATCGGCGCCACGTTCGCGCTGGCAGTGCTG GTGAGCTGCGTGTGGATCGCGTTCCGCCCCGGGCCGGAGGCCGACCCGGACCCGGCCGGCTCCGCGCCCCTGGGCCTGGA TCTCGCCGATTCGGGGCCGGCGGTTCTCGAACCGGTGGATTCGGAGCCGGAAAGCTCGGTCTGGGCGCGTCCCGATCCGT CGGATCGGGAACCGGCGCCGTCGGGATCAACCGGTTCGGCACCGGTGAACTCGGGATCGGCGCATTCCGAGGCCGGACCA ACCGGATCCGCGCGAATGGACTCGGCACCTGTGGACTCCGACCCTATGGACATCGCACCTGTTGACTCCACACCTGTTGA CACCGGGTCTCCCGAGTCGGGGCGCTCCCAGGCGACGAGTACCTCGACGACGCGTTCCACGGCAAAAGGCGACCCGCCGA GCGTGACGAGCCCGGTGCCGTCACACTGA
Upstream 100 bases:
>100_bases GCCACCGGTGCCGTGGTGACGAAGGACGTCCCGCCCAAGGCGGTAGTGGCCGGCTCACCGGCGAAGATCGTCGGGCACAT CGACTACTGGCGCTGAGCCG
Downstream 100 bases:
>100_bases ATCCAGGCTGTGGAGCGCACGCGTAGGCTCTGCGGCGTCAGCCATCTCGGTTCGGGGGGAGCCGTGCGCCGAAAGCGGGA CTGGGAGACCGCGCCGCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 702; Mature: 701
Protein sequence:
>702_residues MSASLAASPAGYPVGARFRPIMLLRSAPLPVWLITGLFAALLASWSVLVPQYHAPDEPNHVDAVMRLVQGAGWPHPGHAF VRPDGVGTIAASPYGTDALPYDLDYAPIAKGDATPRADRPTWDEMGDTRQPDGEPQPPGEIQQLVQHPPLYYWVGAAVLW ALPGGDGDGLRWDVTIGILRLMSALMVTPIPLLAWAGAHRLSDGNRVAATCAALVPLAIPQFSHIGSTVNNDNLLVLTAG LATVTIIYVLCGDTSLRTAAWAGVFIGLALFSKSLAIVLVPMVALAYLAAWRRARRDAHAPPALPRRGPDAPFLLAETGL MTVPPGSTRAPWRQLLLGGALMIGFGGWWWVVNAVRYRTFQPETPGFPLGNYVNDWGDYTEILTNGTILRWWGSFGWFES NLPTEFVRSASVAVVVLFALAIIRGRNGRTRVNLLFLLWPTIGLFGLMTLQSALAFADHHHVSGISGRYLYAGLPSLAIG VGMGVPAFGRRASRVFPALFFVAAATAQWWSIKTVLPYFWKPPGGDLADAWDAMTAWSPWPPAAAVTTMWIGATFALAVL VSCVWIAFRPGPEADPDPAGSAPLGLDLADSGPAVLEPVDSEPESSVWARPDPSDREPAPSGSTGSAPVNSGSAHSEAGP TGSARMDSAPVDSDPMDIAPVDSTPVDTGSPESGRSQATSTSTTRSTAKGDPPSVTSPVPSH
Sequences:
>Translated_702_residues MSASLAASPAGYPVGARFRPIMLLRSAPLPVWLITGLFAALLASWSVLVPQYHAPDEPNHVDAVMRLVQGAGWPHPGHAF VRPDGVGTIAASPYGTDALPYDLDYAPIAKGDATPRADRPTWDEMGDTRQPDGEPQPPGEIQQLVQHPPLYYWVGAAVLW ALPGGDGDGLRWDVTIGILRLMSALMVTPIPLLAWAGAHRLSDGNRVAATCAALVPLAIPQFSHIGSTVNNDNLLVLTAG LATVTIIYVLCGDTSLRTAAWAGVFIGLALFSKSLAIVLVPMVALAYLAAWRRARRDAHAPPALPRRGPDAPFLLAETGL MTVPPGSTRAPWRQLLLGGALMIGFGGWWWVVNAVRYRTFQPETPGFPLGNYVNDWGDYTEILTNGTILRWWGSFGWFES NLPTEFVRSASVAVVVLFALAIIRGRNGRTRVNLLFLLWPTIGLFGLMTLQSALAFADHHHVSGISGRYLYAGLPSLAIG VGMGVPAFGRRASRVFPALFFVAAATAQWWSIKTVLPYFWKPPGGDLADAWDAMTAWSPWPPAAAVTTMWIGATFALAVL VSCVWIAFRPGPEADPDPAGSAPLGLDLADSGPAVLEPVDSEPESSVWARPDPSDREPAPSGSTGSAPVNSGSAHSEAGP TGSARMDSAPVDSDPMDIAPVDSTPVDTGSPESGRSQATSTSTTRSTAKGDPPSVTSPVPSH >Mature_701_residues SASLAASPAGYPVGARFRPIMLLRSAPLPVWLITGLFAALLASWSVLVPQYHAPDEPNHVDAVMRLVQGAGWPHPGHAFV RPDGVGTIAASPYGTDALPYDLDYAPIAKGDATPRADRPTWDEMGDTRQPDGEPQPPGEIQQLVQHPPLYYWVGAAVLWA LPGGDGDGLRWDVTIGILRLMSALMVTPIPLLAWAGAHRLSDGNRVAATCAALVPLAIPQFSHIGSTVNNDNLLVLTAGL ATVTIIYVLCGDTSLRTAAWAGVFIGLALFSKSLAIVLVPMVALAYLAAWRRARRDAHAPPALPRRGPDAPFLLAETGLM TVPPGSTRAPWRQLLLGGALMIGFGGWWWVVNAVRYRTFQPETPGFPLGNYVNDWGDYTEILTNGTILRWWGSFGWFESN LPTEFVRSASVAVVVLFALAIIRGRNGRTRVNLLFLLWPTIGLFGLMTLQSALAFADHHHVSGISGRYLYAGLPSLAIGV GMGVPAFGRRASRVFPALFFVAAATAQWWSIKTVLPYFWKPPGGDLADAWDAMTAWSPWPPAAAVTTMWIGATFALAVLV SCVWIAFRPGPEADPDPAGSAPLGLDLADSGPAVLEPVDSEPESSVWARPDPSDREPAPSGSTGSAPVNSGSAHSEAGPT GSARMDSAPVDSDPMDIAPVDSTPVDTGSPESGRSQATSTSTTRSTAKGDPPSVTSPVPSH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74449; Mature: 74318
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: PS00387 PPASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASLAASPAGYPVGARFRPIMLLRSAPLPVWLITGLFAALLASWSVLVPQYHAPDEPNH CCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH VDAVMRLVQGAGWPHPGHAFVRPDGVGTIAASPYGTDALPYDLDYAPIAKGDATPRADRP HHHHHHHHHCCCCCCCCCEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC TWDEMGDTRQPDGEPQPPGEIQQLVQHPPLYYWVGAAVLWALPGGDGDGLRWDVTIGILR CHHHCCCCCCCCCCCCCCHHHHHHHHCCCCEEHHHHHHHEECCCCCCCCEEEEHHHHHHH LMSALMVTPIPLLAWAGAHRLSDGNRVAATCAALVPLAIPQFSHIGSTVNNDNLLVLTAG HHHHHHHCCHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECH LATVTIIYVLCGDTSLRTAAWAGVFIGLALFSKSLAIVLVPMVALAYLAAWRRARRDAHA HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PPALPRRGPDAPFLLAETGLMTVPPGSTRAPWRQLLLGGALMIGFGGWWWVVNAVRYRTF CCCCCCCCCCCCEEEECCCEEECCCCCCCHHHHHHHHCCCCEECCCHHHHHHHHHHHEEE QPETPGFPLGNYVNDWGDYTEILTNGTILRWWGSFGWFESNLPTEFVRSASVAVVVLFAL CCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHH AIIRGRNGRTRVNLLFLLWPTIGLFGLMTLQSALAFADHHHVSGISGRYLYAGLPSLAIG HHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHH VGMGVPAFGRRASRVFPALFFVAAATAQWWSIKTVLPYFWKPPGGDLADAWDAMTAWSPW HCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHCCCCCCCCHHHHHHHHHCCCCC PPAAAVTTMWIGATFALAVLVSCVWIAFRPGPEADPDPAGSAPLGLDLADSGPAVLEPVD CCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCEECCCCCCEECCCC SEPESSVWARPDPSDREPAPSGSTGSAPVNSGSAHSEAGPTGSARMDSAPVDSDPMDIAP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEC VDSTPVDTGSPESGRSQATSTSTTRSTAKGDPPSVTSPVPSH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SASLAASPAGYPVGARFRPIMLLRSAPLPVWLITGLFAALLASWSVLVPQYHAPDEPNH CCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH VDAVMRLVQGAGWPHPGHAFVRPDGVGTIAASPYGTDALPYDLDYAPIAKGDATPRADRP HHHHHHHHHCCCCCCCCCEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC TWDEMGDTRQPDGEPQPPGEIQQLVQHPPLYYWVGAAVLWALPGGDGDGLRWDVTIGILR CHHHCCCCCCCCCCCCCCHHHHHHHHCCCCEEHHHHHHHEECCCCCCCCEEEEHHHHHHH LMSALMVTPIPLLAWAGAHRLSDGNRVAATCAALVPLAIPQFSHIGSTVNNDNLLVLTAG HHHHHHHCCHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECH LATVTIIYVLCGDTSLRTAAWAGVFIGLALFSKSLAIVLVPMVALAYLAAWRRARRDAHA HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PPALPRRGPDAPFLLAETGLMTVPPGSTRAPWRQLLLGGALMIGFGGWWWVVNAVRYRTF CCCCCCCCCCCCEEEECCCEEECCCCCCCHHHHHHHHCCCCEECCCHHHHHHHHHHHEEE QPETPGFPLGNYVNDWGDYTEILTNGTILRWWGSFGWFESNLPTEFVRSASVAVVVLFAL CCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHH AIIRGRNGRTRVNLLFLLWPTIGLFGLMTLQSALAFADHHHVSGISGRYLYAGLPSLAIG HHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHH VGMGVPAFGRRASRVFPALFFVAAATAQWWSIKTVLPYFWKPPGGDLADAWDAMTAWSPW HCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHCCCCCCCCHHHHHHHHHCCCCC PPAAAVTTMWIGATFALAVLVSCVWIAFRPGPEADPDPAGSAPLGLDLADSGPAVLEPVD CCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCEECCCCCCEECCCC SEPESSVWARPDPSDREPAPSGSTGSAPVNSGSAHSEAGPTGSARMDSAPVDSDPMDIAP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEC VDSTPVDTGSPESGRSQATSTSTTRSTAKGDPPSVTSPVPSH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA