| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158317619
Identifier: 158317619
GI number: 158317619
Start: 7130656
End: 7133211
Strand: Direct
Name: 158317619
Synonym: Franean1_5875
Alternate gene names: NA
Gene position: 7130656-7133211 (Clockwise)
Preceding gene: 158317618
Following gene: 158317628
Centisome position: 79.39
GC content: 76.68
Gene sequence:
>2556_bases GTGCCGGCAAATGCCCTCCATGCACTCGATACGGTCATGGTGCGCGCGTTCGCGGTTCTCCGTGTGCTGAATGTCGCCGT TATCGTCGGCTACGTCGCCGTGTGGTGGTCCTGGTATGCGGAGCATCCGGCCGGGCTCGCCGCGGCCGTGGTCACCGCGG GCTGGGGTGTCTTCTTCGTGGTGGTGTGCCTCGCCCGCCACGCGCTCCCCCGCCCCGTCGTCGCCGGAAACGTGGCCCTC GCGGTCGTCGCCAGCGCCGGCGCGGTGCTCTGGCTGCCTCCGGCCTCGGTCGGTGGCTTCGGCACCTGGGTGCTCTCCAC CGTGACCCACGCGGCGCTGGTCGCCGCGGCGGTGTACGGCCGCCGCACCCACGCCGTCGTGGTCGCGGCGATGGTCGCGG CGTTCCTCTGCGGCGCGGCGGTCGCTCAGGCCACGTTGGACGATCCCGCCCTCGGCGGGAACCACACCCCGCTGAAACGA GCGGTCATCGGGGTCGTGCTGCTCGCCGGGCTCGCGCAGCTCTTCCGACTGGCCGTCGACCGGCTGCGGGCGATCGCGCT CGACGCCGATGCCCGGCTGACCGCGGCCGCGGCCGAGCAGGAGGTGGCCGCGGTCGCCGCGGCCCGGCTGCGGGACGAGC GCGAACGGGAGCGGGTGCTGCACGACACCGTCCTGAACACGCTCACCGGCATCGCCTGGGGCGGCGGCGCCCCCCAGGGC GGGCCGCTGGTGGGGCCCGGGCACCTCACCGCTGAGCAGTGCCGCCACGCGATCGAGGCCGTCCGGTCGATGCTGGACGG CACCGCCGGCGGAACGCGCGACCTGGCCCAGCCGATGCGGCGGGTGGTCGCCGTCGCGCGGGCCCGCGGCCTGCGGGTGG ACGTCCGGGCCCTGCCCACGACGGATCTTCCCGACAAGGTGGTGGCGGCGCTGGCCGGGGCGGCCCAGGAGCTCCTCGCC AACGTGCGCCGGCACGCCGGGACGGACCGCGCCGCGCTCGAGGTGCGCTGGCGGCGCGCCGACGGGGCGGTCACCGTCAT CGTGTCGGACGAGGGGATCGGGTTCGCGGCCCGGGCCGTCCCCGGCGACCGGCTCGGCCTGGCCCGGTCGGTGCACGCGC GGATGGCCGAGATCGGCGGGCGGGCCACCATCACGTCCGAGCCGGGTCACGGGACCACCGTGCAGCTGACCTGGAGCGAC GGGGAGATCGGCGGGGCCCGGCCGGCGGCCCGCCACTGCGCCCGCCCGGCCGGCCGCCGGCCGGCCCACCGCAGGAGCAT GCGCCCGCCGCGGCGCGACCGGTGGGCCGGCTGGGCTGGGCGCCGGTGGGAGGCGGCCCGGGCCGCCTCGCGGGCCCGGG TGCCGGCCGGCGGTACGGCCGCCGAGCTCCGGGACTCCTACGCCGCCGGCCTGCGCCGGACGGTCGCCGCCGTGACGGCG GTCTGGTTCACCTGCACCGTCTTCGTCCTGGCCTTCGTCGCGCCGTCCAGCCGATCGGTGCCCGTCGCCGTGCTGCACTG GCTGGCGATGGCCCTCGTCGTGCTGCCTGCCGCCTGGACCGCCTACCACCGGCCGCTGCGCCGCACCGAGGCGATCGTCC TGATGGCGCTGGCGCTGGCGGTGACGGCGGCGGTCGGCTTCAACATCGCACCCGTCCACACTGATACCGCAGCGGGGACG GGCGGGCCGCCGAGCAGGATCAGCACCTGGCCGGTTCTCGTCCTGCCGCTGCTGCTGGCGTTGCTCGCCGTGTCCCGGCT GTTCGTCGAGTGGATCGTGGCGATCGCCGCCACCGTGACGGTGCTTGACCTGCTCGTGCTCAGGGGCGCGGGCACCGGCC CGCTCGCGCTCGCGCAGCTGCTGACCGCGACGAACGGCCAGATCGCGATACAGGTCATGGTGTCGATGGGCGGTCCGCTG CTGCGGCGCACCGCGGACCAGGTCGCCCGCGCCGTCGAGGCGGAGACCACGCAGGCCGCGGCCACGCGGTCCACGGCCGC GATCCGGCAGGACCGGGCCCGCGGCCTCGCCACGGTCGAGCGGGAGGTGCTGCCGCTGCTGGAGGCGGTCGCCGACGGGC TGCTCGACCCCGGTGACCCGGCGGTGCGCGAGCGGTGCGGCCGGCACGCGACGGCCGTCCGGCGGGCGTTGGTGACGGGT GCGACCGGGGCGCTGGGCAGTCTCGCAGAGCCCGTCTTCGAGGCGCGGGCGCGCGGGCTGGACCTTGAGGTGCAGGTGGT TGGCGAGGCACCGCGGATTCCCGCGCGGGTGAGCGAGCGGCTCGCCGCCATGCTGCCCGGGCTGCTGCGCGCCGTCCCGG CGGCGGGGGCGGAGCACGCCGTCCTCACGCTGATCTGCGAGGAGGGCGACGGGCGGCTGTTCCTGACCTATCCGGCGGCG GCCCCGCCGGAGCTGACCGCGCTGACCGGGATCGCCGGTGGCGAGGTGTTCCCGGTCAGCGCGGTGCTCTCGGTCAGCGC GGACGCCGACGACGGTCAGGTGTGCGTGGAGGTCGCCTGGTCGGCCGGCCGGGAGGTCAGGCTCGGTCGGAGCTGA
Upstream 100 bases:
>100_bases CCGACAAGCGCCATGTAGAACAGCCCGCCGGACGGTGCAGTCACGCGCACTTCGCCGTAAGTAGTCCCAGAACCACCCGG CGCGGTCCAGACTTGCGATC
Downstream 100 bases:
>100_bases AGCCGCCCGGTCGGCCGGGAGGTCAGGCCCGGTCGGAGCTGAACCGGACGGCGCCGGCGCCGAGCACCGCGCCCGGGAAC ACCCTGGCCCCGGCGCGCAG
Product: putative signal transduction histidine kinase
Products: NA
Alternate protein names: Sensor Protein
Number of amino acids: Translated: 851; Mature: 850
Protein sequence:
>851_residues MPANALHALDTVMVRAFAVLRVLNVAVIVGYVAVWWSWYAEHPAGLAAAVVTAGWGVFFVVVCLARHALPRPVVAGNVAL AVVASAGAVLWLPPASVGGFGTWVLSTVTHAALVAAAVYGRRTHAVVVAAMVAAFLCGAAVAQATLDDPALGGNHTPLKR AVIGVVLLAGLAQLFRLAVDRLRAIALDADARLTAAAAEQEVAAVAAARLRDERERERVLHDTVLNTLTGIAWGGGAPQG GPLVGPGHLTAEQCRHAIEAVRSMLDGTAGGTRDLAQPMRRVVAVARARGLRVDVRALPTTDLPDKVVAALAGAAQELLA NVRRHAGTDRAALEVRWRRADGAVTVIVSDEGIGFAARAVPGDRLGLARSVHARMAEIGGRATITSEPGHGTTVQLTWSD GEIGGARPAARHCARPAGRRPAHRRSMRPPRRDRWAGWAGRRWEAARAASRARVPAGGTAAELRDSYAAGLRRTVAAVTA VWFTCTVFVLAFVAPSSRSVPVAVLHWLAMALVVLPAAWTAYHRPLRRTEAIVLMALALAVTAAVGFNIAPVHTDTAAGT GGPPSRISTWPVLVLPLLLALLAVSRLFVEWIVAIAATVTVLDLLVLRGAGTGPLALAQLLTATNGQIAIQVMVSMGGPL LRRTADQVARAVEAETTQAAATRSTAAIRQDRARGLATVEREVLPLLEAVADGLLDPGDPAVRERCGRHATAVRRALVTG ATGALGSLAEPVFEARARGLDLEVQVVGEAPRIPARVSERLAAMLPGLLRAVPAAGAEHAVLTLICEEGDGRLFLTYPAA APPELTALTGIAGGEVFPVSAVLSVSADADDGQVCVEVAWSAGREVRLGRS
Sequences:
>Translated_851_residues MPANALHALDTVMVRAFAVLRVLNVAVIVGYVAVWWSWYAEHPAGLAAAVVTAGWGVFFVVVCLARHALPRPVVAGNVAL AVVASAGAVLWLPPASVGGFGTWVLSTVTHAALVAAAVYGRRTHAVVVAAMVAAFLCGAAVAQATLDDPALGGNHTPLKR AVIGVVLLAGLAQLFRLAVDRLRAIALDADARLTAAAAEQEVAAVAAARLRDERERERVLHDTVLNTLTGIAWGGGAPQG GPLVGPGHLTAEQCRHAIEAVRSMLDGTAGGTRDLAQPMRRVVAVARARGLRVDVRALPTTDLPDKVVAALAGAAQELLA NVRRHAGTDRAALEVRWRRADGAVTVIVSDEGIGFAARAVPGDRLGLARSVHARMAEIGGRATITSEPGHGTTVQLTWSD GEIGGARPAARHCARPAGRRPAHRRSMRPPRRDRWAGWAGRRWEAARAASRARVPAGGTAAELRDSYAAGLRRTVAAVTA VWFTCTVFVLAFVAPSSRSVPVAVLHWLAMALVVLPAAWTAYHRPLRRTEAIVLMALALAVTAAVGFNIAPVHTDTAAGT GGPPSRISTWPVLVLPLLLALLAVSRLFVEWIVAIAATVTVLDLLVLRGAGTGPLALAQLLTATNGQIAIQVMVSMGGPL LRRTADQVARAVEAETTQAAATRSTAAIRQDRARGLATVEREVLPLLEAVADGLLDPGDPAVRERCGRHATAVRRALVTG ATGALGSLAEPVFEARARGLDLEVQVVGEAPRIPARVSERLAAMLPGLLRAVPAAGAEHAVLTLICEEGDGRLFLTYPAA APPELTALTGIAGGEVFPVSAVLSVSADADDGQVCVEVAWSAGREVRLGRS >Mature_850_residues PANALHALDTVMVRAFAVLRVLNVAVIVGYVAVWWSWYAEHPAGLAAAVVTAGWGVFFVVVCLARHALPRPVVAGNVALA VVASAGAVLWLPPASVGGFGTWVLSTVTHAALVAAAVYGRRTHAVVVAAMVAAFLCGAAVAQATLDDPALGGNHTPLKRA VIGVVLLAGLAQLFRLAVDRLRAIALDADARLTAAAAEQEVAAVAAARLRDERERERVLHDTVLNTLTGIAWGGGAPQGG PLVGPGHLTAEQCRHAIEAVRSMLDGTAGGTRDLAQPMRRVVAVARARGLRVDVRALPTTDLPDKVVAALAGAAQELLAN VRRHAGTDRAALEVRWRRADGAVTVIVSDEGIGFAARAVPGDRLGLARSVHARMAEIGGRATITSEPGHGTTVQLTWSDG EIGGARPAARHCARPAGRRPAHRRSMRPPRRDRWAGWAGRRWEAARAASRARVPAGGTAAELRDSYAAGLRRTVAAVTAV WFTCTVFVLAFVAPSSRSVPVAVLHWLAMALVVLPAAWTAYHRPLRRTEAIVLMALALAVTAAVGFNIAPVHTDTAAGTG GPPSRISTWPVLVLPLLLALLAVSRLFVEWIVAIAATVTVLDLLVLRGAGTGPLALAQLLTATNGQIAIQVMVSMGGPLL RRTADQVARAVEAETTQAAATRSTAAIRQDRARGLATVEREVLPLLEAVADGLLDPGDPAVRERCGRHATAVRRALVTGA TGALGSLAEPVFEARARGLDLEVQVVGEAPRIPARVSERLAAMLPGLLRAVPAAGAEHAVLTLICEEGDGRLFLTYPAAA PPELTALTGIAGGEVFPVSAVLSVSADADDGQVCVEVAWSAGREVRLGRS
Specific function: Unknown
COG id: COG4585
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 88554; Mature: 88422
Theoretical pI: Translated: 11.10; Mature: 11.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPANALHALDTVMVRAFAVLRVLNVAVIVGYVAVWWSWYAEHPAGLAAAVVTAGWGVFFV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH VVCLARHALPRPVVAGNVALAVVASAGAVLWLPPASVGGFGTWVLSTVTHAALVAAAVYG HHHHHHHCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHC RRTHAVVVAAMVAAFLCGAAVAQATLDDPALGGNHTPLKRAVIGVVLLAGLAQLFRLAVD CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RLRAIALDADARLTAAAAEQEVAAVAAARLRDERERERVLHDTVLNTLTGIAWGGGAPQG HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GPLVGPGHLTAEQCRHAIEAVRSMLDGTAGGTRDLAQPMRRVVAVARARGLRVDVRALPT CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCC TDLPDKVVAALAGAAQELLANVRRHAGTDRAALEVRWRRADGAVTVIVSDEGIGFAARAV CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEECCCCCCEEEECC PGDRLGLARSVHARMAEIGGRATITSEPGHGTTVQLTWSDGEIGGARPAARHCARPAGRR CCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEECCCCCCCCCHHHHHHCCCCCCC PAHRRSMRPPRRDRWAGWAGRRWEAARAASRARVPAGGTAAELRDSYAAGLRRTVAAVTA CHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VWFTCTVFVLAFVAPSSRSVPVAVLHWLAMALVVLPAAWTAYHRPLRRTEAIVLMALALA HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTAAVGFNIAPVHTDTAAGTGGPPSRISTWPVLVLPLLLALLAVSRLFVEWIVAIAATVT HHHHHCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLDLLVLRGAGTGPLALAQLLTATNGQIAIQVMVSMGGPLLRRTADQVARAVEAETTQAA HHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH ATRSTAAIRQDRARGLATVEREVLPLLEAVADGLLDPGDPAVRERCGRHATAVRRALVTG HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHC ATGALGSLAEPVFEARARGLDLEVQVVGEAPRIPARVSERLAAMLPGLLRAVPAAGAEHA CCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCE VLTLICEEGDGRLFLTYPAAAPPELTALTGIAGGEVFPVSAVLSVSADADDGQVCVEVAW EEEEEEECCCCEEEEEECCCCCCCHHHHHCCCCCCEEEHHHHEEECCCCCCCCEEHHEEC SAGREVRLGRS CCCCCEECCCC >Mature Secondary Structure PANALHALDTVMVRAFAVLRVLNVAVIVGYVAVWWSWYAEHPAGLAAAVVTAGWGVFFV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH VVCLARHALPRPVVAGNVALAVVASAGAVLWLPPASVGGFGTWVLSTVTHAALVAAAVYG HHHHHHHCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHC RRTHAVVVAAMVAAFLCGAAVAQATLDDPALGGNHTPLKRAVIGVVLLAGLAQLFRLAVD CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RLRAIALDADARLTAAAAEQEVAAVAAARLRDERERERVLHDTVLNTLTGIAWGGGAPQG HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GPLVGPGHLTAEQCRHAIEAVRSMLDGTAGGTRDLAQPMRRVVAVARARGLRVDVRALPT CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCC TDLPDKVVAALAGAAQELLANVRRHAGTDRAALEVRWRRADGAVTVIVSDEGIGFAARAV CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEECCCCCCEEEECC PGDRLGLARSVHARMAEIGGRATITSEPGHGTTVQLTWSDGEIGGARPAARHCARPAGRR CCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEECCCCCCCCCHHHHHHCCCCCCC PAHRRSMRPPRRDRWAGWAGRRWEAARAASRARVPAGGTAAELRDSYAAGLRRTVAAVTA CHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VWFTCTVFVLAFVAPSSRSVPVAVLHWLAMALVVLPAAWTAYHRPLRRTEAIVLMALALA HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTAAVGFNIAPVHTDTAAGTGGPPSRISTWPVLVLPLLLALLAVSRLFVEWIVAIAATVT HHHHHCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLDLLVLRGAGTGPLALAQLLTATNGQIAIQVMVSMGGPLLRRTADQVARAVEAETTQAA HHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH ATRSTAAIRQDRARGLATVEREVLPLLEAVADGLLDPGDPAVRERCGRHATAVRRALVTG HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHC ATGALGSLAEPVFEARARGLDLEVQVVGEAPRIPARVSERLAAMLPGLLRAVPAAGAEHA CCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCE VLTLICEEGDGRLFLTYPAAAPPELTALTGIAGGEVFPVSAVLSVSADADDGQVCVEVAW EEEEEEECCCCEEEEEECCCCCCCHHHHHCCCCCCEEEHHHHEEECCCCCCCCEEHHEEC SAGREVRLGRS CCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA