| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317616
Identifier: 158317616
GI number: 158317616
Start: 7126606
End: 7127913
Strand: Direct
Name: 158317616
Synonym: Franean1_5872
Alternate gene names: NA
Gene position: 7126606-7127913 (Clockwise)
Preceding gene: 158317614
Following gene: 158317617
Centisome position: 79.34
GC content: 70.26
Gene sequence:
>1308_bases GTGGAGAAGCTGACCGAAGATACTAGCGGCGCACCGGCGCCACCGGCGCGAACGGTTCGCCGAGCAACCATCGGCGGCCA TAATCCGGCGCTCGACGGACTGCGTGCCCTTGCCGTCCTGACGGTGTTCTTCCACCACATGGACCTGGTGCCCGGCGGCT ACCTGGGTGTCGACCTCTTCCTGGTGCTCAGCGGGTTTCTGATCACCGGCCTGCTGCTGGCCGAGCACGACCGGGAGGGC TGGATCTCGCTGCGCGCCTTCTGGGCCCGCCGGGGTTTCCGGCTCCTTCCCGCCTTCTACATCTTTGTAGCAGCTGGCAT TCCACTCGTCCTTCTCGTCAAGGACACCGACGACCAGTGGCAGTTCCTACGCAACGGTCTCGCCGCGGTCTTCTACGTCG CCAACATCCAGCGCACACTGAATCCTCCGGACAGCGGCGCATGGTTCGGGCACGTGTGGACACTCTCCCTCGAGGAGCAG TTCTATCTGCTCTGGCCGATCGCCCTGGTACTGATCTGCCGCAGCGACCGCTGGCGGCGGCGCCTGCCGGAGATCCTCAT CAGCGCCGTGATCCTGGTGTTGATCTGGCGGGAGATCCTGATCGGCAGCGGCGTGTCGAACTTCCGCATCTACTACGCGC CGGACACCCGCGTCGACTCGCTGCTCGTCGGCTGCCTGCTCGCCACCTGGCGTCACGAGGCGCTGCGGTCGCGGGCAGGC GACCGCTCCCTGGCCGGCGACCTGTCCCGGGTGGCGGGCAGCCGCACCGCGCAGGTCCTGGCCCGCGTCGCGTCGTTCGG CCCGCTCGGCCTGCTGGGCCTGGTGATCCTCTTCTTCACCGGCCCCGAGCTGAAGGGCCCGCCGAACTGGATGGCCCGCG GCGGCTACCTGCTCGTCGCCGTCCTCGCCGCGGTCGCCGTCCTGGGCGCCGACCAGCACCGGCCCGGGTGGTACGACCGT GTGCTCAGTGCCCGTCCGGCCGCCTGGGTGGGGCGGATCTCCTACAGCCTGTACCTGTGGCACTTCCCCGTCACCGGGGT CGCCAACGACTCGCTCGTCCCCCGTTTCGGCCGCGTCCCGGCGGCCGGCGCCGCCCTCGTCGTCAGCCTCGGGCTCGCGT CGGCGTCCTACTACTTCGTCGAGCGGCCAGTGCAGCGCCGCCGGCCGGCGTGGGTGAACGCCCGCGGCACCGCGCCGCGC CGCGGCCGGAGGTCGATCGTGACGCCGTCCGCCGAGCCGCTGCTCGCCACCACCCAGCCGCTTCCGGTGAACGGCGATTC CAAGCCGGTTCGGCGCATTCACTCCTGA
Upstream 100 bases:
>100_bases CGGTACCCCCGGCGAGGTGGGCACCACTGATCGAAAAAGACCCGTCTATCGTTCTCAGTCAGTGCTACCCGTACTACTGG GACCTGTGGGGGGAACCATC
Downstream 100 bases:
>100_bases ACCACCACCGGCCGCGGACCAGCCAGCCGCACGCCAGGTGAAATGAGCCAGCCGGCCGCAGGCGACGACTGTCAGTAATG ACGTTGCCCGCGGCCGGCTG
Product: acyltransferase 3
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MEKLTEDTSGAPAPPARTVRRATIGGHNPALDGLRALAVLTVFFHHMDLVPGGYLGVDLFLVLSGFLITGLLLAEHDREG WISLRAFWARRGFRLLPAFYIFVAAGIPLVLLVKDTDDQWQFLRNGLAAVFYVANIQRTLNPPDSGAWFGHVWTLSLEEQ FYLLWPIALVLICRSDRWRRRLPEILISAVILVLIWREILIGSGVSNFRIYYAPDTRVDSLLVGCLLATWRHEALRSRAG DRSLAGDLSRVAGSRTAQVLARVASFGPLGLLGLVILFFTGPELKGPPNWMARGGYLLVAVLAAVAVLGADQHRPGWYDR VLSARPAAWVGRISYSLYLWHFPVTGVANDSLVPRFGRVPAAGAALVVSLGLASASYYFVERPVQRRRPAWVNARGTAPR RGRRSIVTPSAEPLLATTQPLPVNGDSKPVRRIHS
Sequences:
>Translated_435_residues MEKLTEDTSGAPAPPARTVRRATIGGHNPALDGLRALAVLTVFFHHMDLVPGGYLGVDLFLVLSGFLITGLLLAEHDREG WISLRAFWARRGFRLLPAFYIFVAAGIPLVLLVKDTDDQWQFLRNGLAAVFYVANIQRTLNPPDSGAWFGHVWTLSLEEQ FYLLWPIALVLICRSDRWRRRLPEILISAVILVLIWREILIGSGVSNFRIYYAPDTRVDSLLVGCLLATWRHEALRSRAG DRSLAGDLSRVAGSRTAQVLARVASFGPLGLLGLVILFFTGPELKGPPNWMARGGYLLVAVLAAVAVLGADQHRPGWYDR VLSARPAAWVGRISYSLYLWHFPVTGVANDSLVPRFGRVPAAGAALVVSLGLASASYYFVERPVQRRRPAWVNARGTAPR RGRRSIVTPSAEPLLATTQPLPVNGDSKPVRRIHS >Mature_435_residues MEKLTEDTSGAPAPPARTVRRATIGGHNPALDGLRALAVLTVFFHHMDLVPGGYLGVDLFLVLSGFLITGLLLAEHDREG WISLRAFWARRGFRLLPAFYIFVAAGIPLVLLVKDTDDQWQFLRNGLAAVFYVANIQRTLNPPDSGAWFGHVWTLSLEEQ FYLLWPIALVLICRSDRWRRRLPEILISAVILVLIWREILIGSGVSNFRIYYAPDTRVDSLLVGCLLATWRHEALRSRAG DRSLAGDLSRVAGSRTAQVLARVASFGPLGLLGLVILFFTGPELKGPPNWMARGGYLLVAVLAAVAVLGADQHRPGWYDR VLSARPAAWVGRISYSLYLWHFPVTGVANDSLVPRFGRVPAAGAALVVSLGLASASYYFVERPVQRRRPAWVNARGTAPR RGRRSIVTPSAEPLLATTQPLPVNGDSKPVRRIHS
Specific function: Unknown
COG id: COG1835
COG function: function code I; Predicted acyltransferases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acyltransferase 3 family [H]
Homologues:
Organism=Caenorhabditis elegans, GI17541014, Length=380, Percent_Identity=28.4210526315789, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17507733, Length=330, Percent_Identity=26.6666666666667, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17541016, Length=380, Percent_Identity=28.4210526315789, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17541412, Length=393, Percent_Identity=25.9541984732824, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17541414, Length=379, Percent_Identity=25.5936675461741, Blast_Score=82, Evalue=7e-16, Organism=Caenorhabditis elegans, GI212640769, Length=336, Percent_Identity=24.4047619047619, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17507167, Length=355, Percent_Identity=25.9154929577465, Blast_Score=80, Evalue=3e-15, Organism=Caenorhabditis elegans, GI193203179, Length=369, Percent_Identity=26.0162601626016, Blast_Score=79, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17507283, Length=333, Percent_Identity=25.8258258258258, Blast_Score=78, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17559158, Length=332, Percent_Identity=25.3012048192771, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17509001, Length=365, Percent_Identity=22.7397260273973, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17539118, Length=344, Percent_Identity=26.453488372093, Blast_Score=76, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17507287, Length=146, Percent_Identity=36.3013698630137, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17507735, Length=345, Percent_Identity=26.0869565217391, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71988046, Length=382, Percent_Identity=25.130890052356, Blast_Score=73, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71984481, Length=171, Percent_Identity=32.1637426900585, Blast_Score=72, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17540232, Length=375, Percent_Identity=25.0666666666667, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17506687, Length=343, Percent_Identity=24.7813411078717, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI212646204, Length=158, Percent_Identity=36.0759493670886, Blast_Score=68, Evalue=7e-12, Organism=Caenorhabditis elegans, GI193208811, Length=157, Percent_Identity=32.484076433121, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI193203181, Length=156, Percent_Identity=30.7692307692308, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71990417, Length=373, Percent_Identity=26.2734584450402, Blast_Score=66, Evalue=3e-11, Organism=Caenorhabditis elegans, GI115534354, Length=373, Percent_Identity=25.4691689008043, Blast_Score=66, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002656 - InterPro: IPR013830 - InterPro: IPR013831 [H]
Pfam domain/function: PF01757 Acyl_transf_3 [H]
EC number: NA
Molecular weight: Translated: 47954; Mature: 47954
Theoretical pI: Translated: 11.07; Mature: 11.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKLTEDTSGAPAPPARTVRRATIGGHNPALDGLRALAVLTVFFHHMDLVPGGYLGVDLF CCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LVLSGFLITGLLLAEHDREGWISLRAFWARRGFRLLPAFYIFVAAGIPLVLLVKDTDDQW HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCHHH QFLRNGLAAVFYVANIQRTLNPPDSGAWFGHVWTLSLEEQFYLLWPIALVLICRSDRWRR HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCHHHH RLPEILISAVILVLIWREILIGSGVSNFRIYYAPDTRVDSLLVGCLLATWRHEALRSRAG HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC DRSLAGDLSRVAGSRTAQVLARVASFGPLGLLGLVILFFTGPELKGPPNWMARGGYLLVA CCHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHH VLAAVAVLGADQHRPGWYDRVLSARPAAWVGRISYSLYLWHFPVTGVANDSLVPRFGRVP HHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHEEEEEEEECCCCCCCCCCCCCCCCCCC AAGAALVVSLGLASASYYFVERPVQRRRPAWVNARGTAPRRGRRSIVTPSAEPLLATTQP CCHHHHHHHHHHHHHHHHHHHCCHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCEECCCC LPVNGDSKPVRRIHS CCCCCCCHHHHHCCC >Mature Secondary Structure MEKLTEDTSGAPAPPARTVRRATIGGHNPALDGLRALAVLTVFFHHMDLVPGGYLGVDLF CCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LVLSGFLITGLLLAEHDREGWISLRAFWARRGFRLLPAFYIFVAAGIPLVLLVKDTDDQW HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCHHH QFLRNGLAAVFYVANIQRTLNPPDSGAWFGHVWTLSLEEQFYLLWPIALVLICRSDRWRR HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCHHHH RLPEILISAVILVLIWREILIGSGVSNFRIYYAPDTRVDSLLVGCLLATWRHEALRSRAG HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC DRSLAGDLSRVAGSRTAQVLARVASFGPLGLLGLVILFFTGPELKGPPNWMARGGYLLVA CCHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHH VLAAVAVLGADQHRPGWYDRVLSARPAAWVGRISYSLYLWHFPVTGVANDSLVPRFGRVP HHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHEEEEEEEECCCCCCCCCCCCCCCCCCC AAGAALVVSLGLASASYYFVERPVQRRRPAWVNARGTAPRRGRRSIVTPSAEPLLATTQP CCHHHHHHHHHHHHHHHHHHHCCHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCEECCCC LPVNGDSKPVRRIHS CCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA