| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158317591
Identifier: 158317591
GI number: 158317591
Start: 7093113
End: 7094411
Strand: Direct
Name: 158317591
Synonym: Franean1_5847
Alternate gene names: NA
Gene position: 7093113-7094411 (Clockwise)
Preceding gene: 158317590
Following gene: 158317596
Centisome position: 78.97
GC content: 75.52
Gene sequence:
>1299_bases GTGGCGATCACCGGCCGCGCCGTGGCGCTGGTCGCGCTCGGCATCGTCGTGGTGGCTCTCTCCCCGGTGCCAGGCGCGAC CTTCGTGCTGGTGAACCTGCTGGTCGTCGCGCTGATCTGCGTCGACGTGTGGCTGGCGGGGCAGGTGCGCGCGTGCACGT TCGCCCGCTCCGGGCCGACCGCGGCCCGGCTGGGTCAGCCGGTTCCGCTCGTGCTGACCGTCACCAACAACGGAACCCGC ACCGTGCGGGCCCGCATCCGCGACGGCTGGCCGCCGTCCGCCGGCGCCCGACCGCGGGTGCACCGGGTGACGGTGCCGGC GGGCGAGCGCCGGTTCCTGGAGACCACGCTGAACCCGACCCGGCGCGGTGACCGGATGCCCGTCCGCATCACCGTGCGCT CGCTGGGCCCGCTGGGCCTGGCCGGGCGGCAGGGCCGGCACCACTGCCCGTGGCGGGTGCGGGTGCTGCCGCCGTTCTCG TCCCGCCAGCACCTGCCGGCCGCGCTGGCCCGGTTGCGCGAGGTGGAGGGCGAGGTCGCGATCCGCGGCGGCGGCGCCGG CTCGGAGTTCGACAGCCTGCGGGAGTACGTCGTCGGCGACGACGTGCGGACGATCGACTGGCGGGCCACCGCCCGCCACC ACGGCTCGGTGGTCGTCCGCACCTTCCGGCCCGAACGGGACCGCCGGGTCATCTGCGTCCTCGACACCGGCCGGACGTCA GCCGGCCGGGTCGGCGACGTCCCCCGGCTGGACCACGCGTTGGACGCCGCACTGCTGCTCACCGCCGTCGCCCTGCGGGC CGGGGACCGGGTCGGGCTGGTCGCCCACGACAGCACCAGCCGGATCTCCCTGCCGACCTCACGGGACAACGGCCTGCTGG CCCGGATGAGCGATGCGATGGCCACCCTGGAACCGGCCCTCGTCGAGGCCGACCACGCCGGGATGGCCTCGGCGGTGCTG CGCAACGCCTCCCGGCGTGCCCTCGTTGTCATCTTCACCGAGCTTGTTCCGGCGGTGATCGAGGACGGCCTGCTGCCGGC GCTGCCCACGCTGACCTCCCGGCACACGGTTCTCGTGGCCGCGCTGCGCGACCCCCGGCTTGACGAGCTCACAGCCGGGC ACGGCGACGTCCACCAGGTGTACGCGGCGGCGGCAGCCGAGCAGACGCTGCTGCGGCGGCGCGAGCTGACCGAGGCGCTG CGCCGCCGCGGCGTCGAGGTGGTGGACGTGGCACCGGCGCACTACGCGGCGCTGGTCACCGACACCTACCTCACGCTGAA GGCCCGCGGACGCCTGTGA
Upstream 100 bases:
>100_bases GATCAGCCTGCGGCCGGAGGCCGAGCAGGACGGCGTCACCGCCGACACCGTGCTCGACCAGGTGCTCGCCGTCGTGCCCG TCCCCCGGTAACGGGCAGCT
Downstream 100 bases:
>100_bases CCGCGGCCCGCGCGGCGGCCCCCCGCGCGAGATCCGGGGTGCCCGGACGCTCCCGGGGCTCCGCGGCGGCGTCCAGGCCC GTCTCGCGCACGACGGCACG
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Secreted Protein
Number of amino acids: Translated: 432; Mature: 431
Protein sequence:
>432_residues MAITGRAVALVALGIVVVALSPVPGATFVLVNLLVVALICVDVWLAGQVRACTFARSGPTAARLGQPVPLVLTVTNNGTR TVRARIRDGWPPSAGARPRVHRVTVPAGERRFLETTLNPTRRGDRMPVRITVRSLGPLGLAGRQGRHHCPWRVRVLPPFS SRQHLPAALARLREVEGEVAIRGGGAGSEFDSLREYVVGDDVRTIDWRATARHHGSVVVRTFRPERDRRVICVLDTGRTS AGRVGDVPRLDHALDAALLLTAVALRAGDRVGLVAHDSTSRISLPTSRDNGLLARMSDAMATLEPALVEADHAGMASAVL RNASRRALVVIFTELVPAVIEDGLLPALPTLTSRHTVLVAALRDPRLDELTAGHGDVHQVYAAAAAEQTLLRRRELTEAL RRRGVEVVDVAPAHYAALVTDTYLTLKARGRL
Sequences:
>Translated_432_residues MAITGRAVALVALGIVVVALSPVPGATFVLVNLLVVALICVDVWLAGQVRACTFARSGPTAARLGQPVPLVLTVTNNGTR TVRARIRDGWPPSAGARPRVHRVTVPAGERRFLETTLNPTRRGDRMPVRITVRSLGPLGLAGRQGRHHCPWRVRVLPPFS SRQHLPAALARLREVEGEVAIRGGGAGSEFDSLREYVVGDDVRTIDWRATARHHGSVVVRTFRPERDRRVICVLDTGRTS AGRVGDVPRLDHALDAALLLTAVALRAGDRVGLVAHDSTSRISLPTSRDNGLLARMSDAMATLEPALVEADHAGMASAVL RNASRRALVVIFTELVPAVIEDGLLPALPTLTSRHTVLVAALRDPRLDELTAGHGDVHQVYAAAAAEQTLLRRRELTEAL RRRGVEVVDVAPAHYAALVTDTYLTLKARGRL >Mature_431_residues AITGRAVALVALGIVVVALSPVPGATFVLVNLLVVALICVDVWLAGQVRACTFARSGPTAARLGQPVPLVLTVTNNGTRT VRARIRDGWPPSAGARPRVHRVTVPAGERRFLETTLNPTRRGDRMPVRITVRSLGPLGLAGRQGRHHCPWRVRVLPPFSS RQHLPAALARLREVEGEVAIRGGGAGSEFDSLREYVVGDDVRTIDWRATARHHGSVVVRTFRPERDRRVICVLDTGRTSA GRVGDVPRLDHALDAALLLTAVALRAGDRVGLVAHDSTSRISLPTSRDNGLLARMSDAMATLEPALVEADHAGMASAVLR NASRRALVVIFTELVPAVIEDGLLPALPTLTSRHTVLVAALRDPRLDELTAGHGDVHQVYAAAAAEQTLLRRRELTEALR RRGVEVVDVAPAHYAALVTDTYLTLKARGRL
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46513; Mature: 46381
Theoretical pI: Translated: 11.73; Mature: 11.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAITGRAVALVALGIVVVALSPVPGATFVLVNLLVVALICVDVWLAGQVRACTFARSGPT CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC AARLGQPVPLVLTVTNNGTRTVRARIRDGWPPSAGARPRVHRVTVPAGERRFLETTLNPT HHHCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCHHHHHCCCCC RRGDRMPVRITVRSLGPLGLAGRQGRHHCPWRVRVLPPFSSRQHLPAALARLREVEGEVA CCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCEE IRGGGAGSEFDSLREYVVGDDVRTIDWRATARHHGSVVVRTFRPERDRRVICVLDTGRTS EECCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEECCCCCCEEEEEEECCCCC AGRVGDVPRLDHALDAALLLTAVALRAGDRVGLVAHDSTSRISLPTSRDNGLLARMSDAM CCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEECCCCCCCCEEEHHHHHH ATLEPALVEADHAGMASAVLRNASRRALVVIFTELVPAVIEDGLLPALPTLTSRHTVLVA HHHCHHHEECCCCCHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCCEEEEE ALRDPRLDELTAGHGDVHQVYAAAAAEQTLLRRRELTEALRRRGVEVVDVAPAHYAALVT EECCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHEEE DTYLTLKARGRL EEEEEEEECCCC >Mature Secondary Structure AITGRAVALVALGIVVVALSPVPGATFVLVNLLVVALICVDVWLAGQVRACTFARSGPT CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC AARLGQPVPLVLTVTNNGTRTVRARIRDGWPPSAGARPRVHRVTVPAGERRFLETTLNPT HHHCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCHHHHHCCCCC RRGDRMPVRITVRSLGPLGLAGRQGRHHCPWRVRVLPPFSSRQHLPAALARLREVEGEVA CCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCEE IRGGGAGSEFDSLREYVVGDDVRTIDWRATARHHGSVVVRTFRPERDRRVICVLDTGRTS EECCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEECCCCCCEEEEEEECCCCC AGRVGDVPRLDHALDAALLLTAVALRAGDRVGLVAHDSTSRISLPTSRDNGLLARMSDAM CCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEECCCCCCCCEEEHHHHHH ATLEPALVEADHAGMASAVLRNASRRALVVIFTELVPAVIEDGLLPALPTLTSRHTVLVA HHHCHHHEECCCCCHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCCEEEEE ALRDPRLDELTAGHGDVHQVYAAAAAEQTLLRRRELTEALRRRGVEVVDVAPAHYAALVT EECCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHEEE DTYLTLKARGRL EEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA