| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317589
Identifier: 158317589
GI number: 158317589
Start: 7090642
End: 7092066
Strand: Direct
Name: 158317589
Synonym: Franean1_5845
Alternate gene names: NA
Gene position: 7090642-7092066 (Clockwise)
Preceding gene: 158317588
Following gene: 158317590
Centisome position: 78.94
GC content: 75.58
Gene sequence:
>1425_bases GTGGGCCGAGGCGGGGGTGGCTCGACCCACGTCCGCAGCGGTCCCCGGCCGCCGGCCATCCGGCGCGCGGTGCGGCTCGG CGCCGTCCTCGGCGCACTGGTGATCGCGTACGCGGTGATCACCGCCGTGGTCAGCCGCCCGGCCGGCCACGGCTACCTGG ACATCACCTCCGCGGACGGATACGGCACCCGGGCGGTCGCGGAGATCCTGCGCGCCCGCGGGGTGACGGTGACGGCCGGC GAGCAGGTGCCGATGGCAGCCCCGGCGCCCGGCCCCGCGGGGACGTCCACAGGGCGGACGGTGGTCGTCACCAACCCCGA CCTGCTGTCCCAGGCCGAGCTCGACGCGCTGGTGACCAGCACCCGCGCCGGCTCGGACGTCGTTCTCGTCGCCCCGGATC CCAGCGTGGTGGTCGCGCTGGGCCTGCCGGTCACGACCGGGCAGCCGGGCGAAGGTGACTACGGTGACGAATCCCCCCCG GGGTGCACGCTCCCCGAGGCAGGCGCGGCCGGGTCGACCACGGTCGGCGACTCGGTGACGTTCGCCCGCACCAATGGCCA GGACAGCCAGAACGGCCAGGGCACCCCGGACGGCCGGAGCGGCGCCACCCGCGTCGAGCTCTGCTACGGCGACCCCGGCG CGGCCCGGTTGGCGGTGCTCACCCCCACCCGGTCGAACGTCGGCAGCGGGCCGACCGGGCGCCTGGTGCTCCTGGGCGGC GGCGGCTTCCTCACCAACGAACGCCTGGACGAGACCGGGAACGCGGCGCTGGCCCTCGGGCTGCTCGCCCGCGCCCCCCG GCTGGAGTGGGTGACCCCGGTCGTCGCGGCCGAGGACGCCGTGGGCACGAAAGGCCTGTCGGAGCTGCTCCCCGACGGTT TCTGGTTCGGCGCCCTGCAACTCCTGCTCGTCCTGGTGTTCCTCGCTTTGTGGCAGGGACGGCGGCTCGGGCCGCCGATC GAGGAGCCGCTGCCCGTCGTGGTGCGCTCCACCGAGACCGTCGAGGGCCGGGGCCGGCTCTACGCCGCGGCGCACGCCCG CGAACGGGCCGCCGCGGCGCTGCGGGCGGGGCTGCGGGCCCGGCTCGCCGACCGGCTCGGCATCGATACCGCCGCGGCCG GCTCGCCGTGGCACACCCGTGGTCCGGATCCGACCGTCCTCGTGGCCTCCGTCGCCGAACAGACCGGACGGTCACCCATG GAGATCGGGCCACTCCTGTACGGTTCGGACATGGCGCCCACGGGCTATTCCCAACCACCCTGGCCGGCCCACCAGGGCCC GCCCGCCTCATGGGCATCACCGATCCCGCCGAGCCCGGTCGACGTCCAGGTTGCCAGGACGAGGCGGGATGCCGAGGGTG ACGTCGCGCTCGTCCGGCTGGCCCGCGCACTGCACGAACTCGATCGACAGGTGGGCAGAAGGTGA
Upstream 100 bases:
>100_bases CGGTCCCGGCATGACCGCTCCGCCGACTGACCGCCCGCGCCCGGCGACACCGGCCTCCGGGCCCTTCGGCACCCCAGCGG GACCGCGCTCAGGCGCAGGC
Downstream 100 bases:
>100_bases CATCCCCGAACCTCGGCGCTCCCCCGCCCGGATCGGAGACGCTGCGCAAGCCGCTGGCCGCTCCGCAGGCGCCTCCCCCC GCCGACGCCGAGGCCGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 474; Mature: 473
Protein sequence:
>474_residues MGRGGGGSTHVRSGPRPPAIRRAVRLGAVLGALVIAYAVITAVVSRPAGHGYLDITSADGYGTRAVAEILRARGVTVTAG EQVPMAAPAPGPAGTSTGRTVVVTNPDLLSQAELDALVTSTRAGSDVVLVAPDPSVVVALGLPVTTGQPGEGDYGDESPP GCTLPEAGAAGSTTVGDSVTFARTNGQDSQNGQGTPDGRSGATRVELCYGDPGAARLAVLTPTRSNVGSGPTGRLVLLGG GGFLTNERLDETGNAALALGLLARAPRLEWVTPVVAAEDAVGTKGLSELLPDGFWFGALQLLLVLVFLALWQGRRLGPPI EEPLPVVVRSTETVEGRGRLYAAAHARERAAAALRAGLRARLADRLGIDTAAAGSPWHTRGPDPTVLVASVAEQTGRSPM EIGPLLYGSDMAPTGYSQPPWPAHQGPPASWASPIPPSPVDVQVARTRRDAEGDVALVRLARALHELDRQVGRR
Sequences:
>Translated_474_residues MGRGGGGSTHVRSGPRPPAIRRAVRLGAVLGALVIAYAVITAVVSRPAGHGYLDITSADGYGTRAVAEILRARGVTVTAG EQVPMAAPAPGPAGTSTGRTVVVTNPDLLSQAELDALVTSTRAGSDVVLVAPDPSVVVALGLPVTTGQPGEGDYGDESPP GCTLPEAGAAGSTTVGDSVTFARTNGQDSQNGQGTPDGRSGATRVELCYGDPGAARLAVLTPTRSNVGSGPTGRLVLLGG GGFLTNERLDETGNAALALGLLARAPRLEWVTPVVAAEDAVGTKGLSELLPDGFWFGALQLLLVLVFLALWQGRRLGPPI EEPLPVVVRSTETVEGRGRLYAAAHARERAAAALRAGLRARLADRLGIDTAAAGSPWHTRGPDPTVLVASVAEQTGRSPM EIGPLLYGSDMAPTGYSQPPWPAHQGPPASWASPIPPSPVDVQVARTRRDAEGDVALVRLARALHELDRQVGRR >Mature_473_residues GRGGGGSTHVRSGPRPPAIRRAVRLGAVLGALVIAYAVITAVVSRPAGHGYLDITSADGYGTRAVAEILRARGVTVTAGE QVPMAAPAPGPAGTSTGRTVVVTNPDLLSQAELDALVTSTRAGSDVVLVAPDPSVVVALGLPVTTGQPGEGDYGDESPPG CTLPEAGAAGSTTVGDSVTFARTNGQDSQNGQGTPDGRSGATRVELCYGDPGAARLAVLTPTRSNVGSGPTGRLVLLGGG GFLTNERLDETGNAALALGLLARAPRLEWVTPVVAAEDAVGTKGLSELLPDGFWFGALQLLLVLVFLALWQGRRLGPPIE EPLPVVVRSTETVEGRGRLYAAAHARERAAAALRAGLRARLADRLGIDTAAAGSPWHTRGPDPTVLVASVAEQTGRSPME IGPLLYGSDMAPTGYSQPPWPAHQGPPASWASPIPPSPVDVQVARTRRDAEGDVALVRLARALHELDRQVGRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48604; Mature: 48472
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRGGGGSTHVRSGPRPPAIRRAVRLGAVLGALVIAYAVITAVVSRPAGHGYLDITSADG CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC YGTRAVAEILRARGVTVTAGEQVPMAAPAPGPAGTSTGRTVVVTNPDLLSQAELDALVTS CCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHH TRAGSDVVLVAPDPSVVVALGLPVTTGQPGEGDYGDESPPGCTLPEAGAAGSTTVGDSVT CCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE FARTNGQDSQNGQGTPDGRSGATRVELCYGDPGAARLAVLTPTRSNVGSGPTGRLVLLGG EEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCEEEEEEC GGFLTNERLDETGNAALALGLLARAPRLEWVTPVVAAEDAVGTKGLSELLPDGFWFGALQ CCCCCCCCCCCCCCHHHHHHHHHCCCCCHHCCHHHHCCCCCCCCCHHHHCCCCHHHHHHH LLLVLVFLALWQGRRLGPPIEEPLPVVVRSTETVEGRGRLYAAAHARERAAAALRAGLRA HHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCEECCCCCEEEEHHHHHHHHHHHHHHHHH RLADRLGIDTAAAGSPWHTRGPDPTVLVASVAEQTGRSPMEIGPLLYGSDMAPTGYSQPP HHHHHHCCCCCCCCCCCCCCCCCCCEEEEEHHHHHCCCCCHHCCEEECCCCCCCCCCCCC WPAHQGPPASWASPIPPSPVDVQVARTRRDAEGDVALVRLARALHELDRQVGRR CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GRGGGGSTHVRSGPRPPAIRRAVRLGAVLGALVIAYAVITAVVSRPAGHGYLDITSADG CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC YGTRAVAEILRARGVTVTAGEQVPMAAPAPGPAGTSTGRTVVVTNPDLLSQAELDALVTS CCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHH TRAGSDVVLVAPDPSVVVALGLPVTTGQPGEGDYGDESPPGCTLPEAGAAGSTTVGDSVT CCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE FARTNGQDSQNGQGTPDGRSGATRVELCYGDPGAARLAVLTPTRSNVGSGPTGRLVLLGG EEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCEEEEEEC GGFLTNERLDETGNAALALGLLARAPRLEWVTPVVAAEDAVGTKGLSELLPDGFWFGALQ CCCCCCCCCCCCCCHHHHHHHHHCCCCCHHCCHHHHCCCCCCCCCHHHHCCCCHHHHHHH LLLVLVFLALWQGRRLGPPIEEPLPVVVRSTETVEGRGRLYAAAHARERAAAALRAGLRA HHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCEECCCCCEEEEHHHHHHHHHHHHHHHHH RLADRLGIDTAAAGSPWHTRGPDPTVLVASVAEQTGRSPMEIGPLLYGSDMAPTGYSQPP HHHHHHCCCCCCCCCCCCCCCCCCCEEEEEHHHHHCCCCCHHCCEEECCCCCCCCCCCCC WPAHQGPPASWASPIPPSPVDVQVARTRRDAEGDVALVRLARALHELDRQVGRR CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA