| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317558
Identifier: 158317558
GI number: 158317558
Start: 7056507
End: 7057730
Strand: Direct
Name: 158317558
Synonym: Franean1_5814
Alternate gene names: NA
Gene position: 7056507-7057730 (Clockwise)
Preceding gene: 158317557
Following gene: 158317559
Centisome position: 78.56
GC content: 72.79
Gene sequence:
>1224_bases ATGCGCGTGTTGTTGTCGACGTATGGGTCACGCGGGGACGTGGAGCCGCTGGTGGGACTCGCGGTACGGCTGCGGGCGCT CGGCGCGGAGGTACGAATGTGCGCACCGCCCGACAAGGAGTTCGCGCAGCGGCTGGCCGACGTCGGCGTGCCGCTGGTGC CGGTCGGCCCGCCGATGGGCTCGATGGTGCGGCCGTCATCGGCGGGAGCGGCGTCCCGGCGGGTGTCTGAGCTGGCCGGG CTGTTCGACTCGGTCGCCGCGGCCGCCGGGGGATGTGACGCGCTTCTGGCGACCGGGTTGGCGCACTTCGCGTCGCGGTC GGTGGCCGAGAAGCTGGGCATCCCTTACGTGTACGCGACCTTCTGCCCGTTCCTGCTGCCGTCGCCGCATCACGCGCCGC CGCTGGTGCTGCCGGGTGAGTCGTTCCCACCGGGGGTGACTGACAACCGGGTGCTGTGGGAGCTGAACGCGCAGAGCTTC AACGCGCTGCACGGCGAGGCGCTCAACGCCCACCGGGCCTCGGTCGGTCTGCCGCCGGTGGACGACGTCCGCACTTTCAT CTTCACCGACCATCCGTGGCTGGCCACGGATCCCGCCCTCGGCCCGTGGCAGGAGACGGCGGACCTCGACGTCGTACGCA CCGGGGCGTGGATCCTGCCGGACGAGCGCCCGCTCCCGGCCGAGCTGGTGGCGTTCCTGGACGCCGGCCCACCACCGGTG TACGCCGGCTTCGGCAGCATGCGCACCGTCTCGGCGGACATCGCCCGGGTGGCCATCGAAGCGATCCGCGCGCAGGGCCG CCGGGCAGTCGTCGGGCGCGGCTGGGCGGGCCTGGCCCTGATCGACGATGGGGACGACTGCCTCGTCGTCGGCGAGGTCA ACCAGCAGGCGCTGTTCAGCCGGGTGGACGCTGTCGTGCACCACGGCGGCGCGGGTACGACGACGACGGCCGCTCGGGCA GGCGTTCCTCAGGTGGTGGTACCCCAGGCGGGTGACCAGCTGTACTGGGCTGGCCGGGTAGCGGCCCTGGGTATCGGCGC GGCACACGACGGTCCGACTCCGACCACCGAGTCCCTGTCCGCCGCGCTCAGCACCGCTCTGGCCCCCGAGACCCGCGCAC ACGCGACGACCCTGGGCGGCACGGTTCGGAGCGACGGGGCGACCGTGGCCGCAGCGCTGCTACTCGAAGCGGCAAGCCGA GAAAGGCCTTCCATGCCCGGGTGA
Upstream 100 bases:
>100_bases CGTTCAGGCGCACCGGGGGGCTTGCGCCAAGACCCGGGTTGCGCCGCAGAACAGCCGGCCGGGGCCAGAAGTCGCAGACA GCGGAAACAGGGGTCGCGAA
Downstream 100 bases:
>100_bases ACCCCCCGAAGCAGCCGGCAGGTCCCGCCGCACGCCCGCCGGGCGTCGTGGACTGCCGAGACCGCTACCGCGATACCCTG ACCGGCATCAGCTCAGCCCA
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MRVLLSTYGSRGDVEPLVGLAVRLRALGAEVRMCAPPDKEFAQRLADVGVPLVPVGPPMGSMVRPSSAGAASRRVSELAG LFDSVAAAAGGCDALLATGLAHFASRSVAEKLGIPYVYATFCPFLLPSPHHAPPLVLPGESFPPGVTDNRVLWELNAQSF NALHGEALNAHRASVGLPPVDDVRTFIFTDHPWLATDPALGPWQETADLDVVRTGAWILPDERPLPAELVAFLDAGPPPV YAGFGSMRTVSADIARVAIEAIRAQGRRAVVGRGWAGLALIDDGDDCLVVGEVNQQALFSRVDAVVHHGGAGTTTTAARA GVPQVVVPQAGDQLYWAGRVAALGIGAAHDGPTPTTESLSAALSTALAPETRAHATTLGGTVRSDGATVAAALLLEAASR ERPSMPG
Sequences:
>Translated_407_residues MRVLLSTYGSRGDVEPLVGLAVRLRALGAEVRMCAPPDKEFAQRLADVGVPLVPVGPPMGSMVRPSSAGAASRRVSELAG LFDSVAAAAGGCDALLATGLAHFASRSVAEKLGIPYVYATFCPFLLPSPHHAPPLVLPGESFPPGVTDNRVLWELNAQSF NALHGEALNAHRASVGLPPVDDVRTFIFTDHPWLATDPALGPWQETADLDVVRTGAWILPDERPLPAELVAFLDAGPPPV YAGFGSMRTVSADIARVAIEAIRAQGRRAVVGRGWAGLALIDDGDDCLVVGEVNQQALFSRVDAVVHHGGAGTTTTAARA GVPQVVVPQAGDQLYWAGRVAALGIGAAHDGPTPTTESLSAALSTALAPETRAHATTLGGTVRSDGATVAAALLLEAASR ERPSMPG >Mature_407_residues MRVLLSTYGSRGDVEPLVGLAVRLRALGAEVRMCAPPDKEFAQRLADVGVPLVPVGPPMGSMVRPSSAGAASRRVSELAG LFDSVAAAAGGCDALLATGLAHFASRSVAEKLGIPYVYATFCPFLLPSPHHAPPLVLPGESFPPGVTDNRVLWELNAQSF NALHGEALNAHRASVGLPPVDDVRTFIFTDHPWLATDPALGPWQETADLDVVRTGAWILPDERPLPAELVAFLDAGPPPV YAGFGSMRTVSADIARVAIEAIRAQGRRAVVGRGWAGLALIDDGDDCLVVGEVNQQALFSRVDAVVHHGGAGTTTTAARA GVPQVVVPQAGDQLYWAGRVAALGIGAAHDGPTPTTESLSAALSTALAPETRAHATTLGGTVRSDGATVAAALLLEAASR ERPSMPG
Specific function: Unknown
COG id: COG1819
COG function: function code GC; Glycosyl transferases, related to UDP-glucuronosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.leprae L518_C2_147 and M.tuberculosis Rv1524 [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6323218, Length=388, Percent_Identity=28.0927835051546, Blast_Score=108, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004276 [H]
Pfam domain/function: PF03033 Glyco_transf_28 [H]
EC number: NA
Molecular weight: Translated: 42077; Mature: 42077
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVLLSTYGSRGDVEPLVGLAVRLRALGAEVRMCAPPDKEFAQRLADVGVPLVPVGPPMG CEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHCCCCEEECCCCCC SMVRPSSAGAASRRVSELAGLFDSVAAAAGGCDALLATGLAHFASRSVAEKLGIPYVYAT CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEHHH FCPFLLPSPHHAPPLVLPGESFPPGVTDNRVLWELNAQSFNALHGEALNAHRASVGLPPV HHHHHCCCCCCCCCEEECCCCCCCCCCCCEEEEEECCCHHHHHHCHHHCCHHCCCCCCCH DDVRTFIFTDHPWLATDPALGPWQETADLDVVRTGAWILPDERPLPAELVAFLDAGPPPV HHCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCEECCCCCCCHHHHHHHHCCCCCCE YAGFGSMRTVSADIARVAIEAIRAQGRRAVVGRGWAGLALIDDGDDCLVVGEVNQQALFS EECCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEECCCCEEEEECCCHHHHHH RVDAVVHHGGAGTTTTAARAGVPQVVVPQAGDQLYWAGRVAALGIGAAHDGPTPTTESLS HHHHHHHCCCCCCCHHHHHCCCCEEEECCCCCCEEECCCEEEEECCCCCCCCCCCHHHHH AALSTALAPETRAHATTLGGTVRSDGATVAAALLLEAASRERPSMPG HHHHHHHCCCHHHHHHHCCCEECCCCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRVLLSTYGSRGDVEPLVGLAVRLRALGAEVRMCAPPDKEFAQRLADVGVPLVPVGPPMG CEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHCCCCEEECCCCCC SMVRPSSAGAASRRVSELAGLFDSVAAAAGGCDALLATGLAHFASRSVAEKLGIPYVYAT CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEHHH FCPFLLPSPHHAPPLVLPGESFPPGVTDNRVLWELNAQSFNALHGEALNAHRASVGLPPV HHHHHCCCCCCCCCEEECCCCCCCCCCCCEEEEEECCCHHHHHHCHHHCCHHCCCCCCCH DDVRTFIFTDHPWLATDPALGPWQETADLDVVRTGAWILPDERPLPAELVAFLDAGPPPV HHCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCEECCCCCCCHHHHHHHHCCCCCCE YAGFGSMRTVSADIARVAIEAIRAQGRRAVVGRGWAGLALIDDGDDCLVVGEVNQQALFS EECCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEECCCCEEEEECCCHHHHHH RVDAVVHHGGAGTTTTAARAGVPQVVVPQAGDQLYWAGRVAALGIGAAHDGPTPTTESLS HHHHHHHCCCCCCCHHHHHCCCCEEEECCCCCCEEECCCEEEEECCCCCCCCCCCHHHHH AALSTALAPETRAHATTLGGTVRSDGATVAAALLLEAASRERPSMPG HHHHHHHCCCHHHHHHHCCCEECCCCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]