| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317543
Identifier: 158317543
GI number: 158317543
Start: 7042935
End: 7044077
Strand: Direct
Name: 158317543
Synonym: Franean1_5799
Alternate gene names: NA
Gene position: 7042935-7044077 (Clockwise)
Preceding gene: 158317539
Following gene: 158317550
Centisome position: 78.41
GC content: 76.29
Gene sequence:
>1143_bases GTGTCGATTGGCGTCGATCGACGTGCGGTCCTGCTCACGACCGGCGTACTGGCCGTGGTCCCGATGAGCCCCGAGAGCCC GACACCGGCCGCCGGTCACGAGACCGCCTCGAGCCTGCATGACGCGTGCCTCGGGGCACTGCGCGCGGCCGTCGCGAACT ACGAGACCGTCGATCTCGCCACCACCGCGTCCACCCTCGAGCCGCTCGAGGAGACCAGTCGGACCATCCCGCAGCAGTAC CGGCTGCGGGGGCGCGCCGCCATCGACTGGATGTGGCTGCACGCGGCGGTCACCACCGCCGCCGCCGCCGCCTCGTACGA CCGGGGCCGGCACGGCGAAGCCGCGGCCCGCGCCGACCGCGCCGCGTCCCTGGCCCGCGCGGCCGGAGACGGCCCGCTCG CCGCCCGCGCACTGGCACTGCGCGCCCGGGTGGTGCGCCCGCACAGCCCGGCCGTCGCCCTGCAGATCGCCGGCTCGGCC GCGCGGATCGCCGGCCGCAGCCCCACCCGGGCCCTGATCTCGGGCAAGGTCGCCGCCAGCGCCTGTGCCGCCGCCGGTGA CGCCGCGGGCGTGCGCGACGCCGTGGCCCGGGCCTGGGCCACCATGGCGGAGCTCGGTGAGGACGTGCACGGGCGTCCCG GGTTCAGCCTCGACACCTATTCACCCGCCGACCTGGCCCTCGCCTGCGCAGAAGCACTCACCACCGTCGGCGCAGCCGAC GAGGCGGCTCCCTACCTCGACCGGGCCGCGTCGCTCATCGCCCGCAGCGGCCAGACCGGTATGATCGTCTCGGTGCGGAT GGCTCAGTCGCGGGCCGCGATCGCCCGTGACTTCCCGGACCGGGACGAGGCGGTCGAGCACGCCTCCGACGCGGTCGCCC TGGCCGCCCGCCGGCCGGCCGAGTGGGTCGCCCGCCTGGTGCGCGACGTCTCCGACCTGGCCGAGATCCGGACAGGTCAC GGCTTCGACGATCTCGTGGCGGCCACCGCCGGGTGGATCGCGCTTCCGGCAGCGGCTCCGAGCCCCGGCGACGGTGCCGA CCGCGAGGTGGCCGACCGCGACGTGACCCTCACCCACGCCGGCGGACCGACGGCCGTCCCGTCGCCGCGCGCCGAGATGA TGTCGGGCCGCAAGGACATGTGA
Upstream 100 bases:
>100_bases TGAGGTCAGCGGATATGCGCACTCGCAACAGCCGGCCGCCGATGCCCGGAAGACACCCGAGCGGGCACGGGCGAGCGGAT TGCGAACGGAGGGTCCCCTC
Downstream 100 bases:
>100_bases GCCGCGGCCTGGGCCGCGGGCTCGGCGGCTCAGGGCTCGGCGGCTCAGGGCTCGGCGGCTCAGGGCTCGGCGGGCGTTCT GACCAGCGACTGGGCCTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 380; Mature: 379
Protein sequence:
>380_residues MSIGVDRRAVLLTTGVLAVVPMSPESPTPAAGHETASSLHDACLGALRAAVANYETVDLATTASTLEPLEETSRTIPQQY RLRGRAAIDWMWLHAAVTTAAAAASYDRGRHGEAAARADRAASLARAAGDGPLAARALALRARVVRPHSPAVALQIAGSA ARIAGRSPTRALISGKVAASACAAAGDAAGVRDAVARAWATMAELGEDVHGRPGFSLDTYSPADLALACAEALTTVGAAD EAAPYLDRAASLIARSGQTGMIVSVRMAQSRAAIARDFPDRDEAVEHASDAVALAARRPAEWVARLVRDVSDLAEIRTGH GFDDLVAATAGWIALPAAAPSPGDGADREVADRDVTLTHAGGPTAVPSPRAEMMSGRKDM
Sequences:
>Translated_380_residues MSIGVDRRAVLLTTGVLAVVPMSPESPTPAAGHETASSLHDACLGALRAAVANYETVDLATTASTLEPLEETSRTIPQQY RLRGRAAIDWMWLHAAVTTAAAAASYDRGRHGEAAARADRAASLARAAGDGPLAARALALRARVVRPHSPAVALQIAGSA ARIAGRSPTRALISGKVAASACAAAGDAAGVRDAVARAWATMAELGEDVHGRPGFSLDTYSPADLALACAEALTTVGAAD EAAPYLDRAASLIARSGQTGMIVSVRMAQSRAAIARDFPDRDEAVEHASDAVALAARRPAEWVARLVRDVSDLAEIRTGH GFDDLVAATAGWIALPAAAPSPGDGADREVADRDVTLTHAGGPTAVPSPRAEMMSGRKDM >Mature_379_residues SIGVDRRAVLLTTGVLAVVPMSPESPTPAAGHETASSLHDACLGALRAAVANYETVDLATTASTLEPLEETSRTIPQQYR LRGRAAIDWMWLHAAVTTAAAAASYDRGRHGEAAARADRAASLARAAGDGPLAARALALRARVVRPHSPAVALQIAGSAA RIAGRSPTRALISGKVAASACAAAGDAAGVRDAVARAWATMAELGEDVHGRPGFSLDTYSPADLALACAEALTTVGAADE AAPYLDRAASLIARSGQTGMIVSVRMAQSRAAIARDFPDRDEAVEHASDAVALAARRPAEWVARLVRDVSDLAEIRTGHG FDDLVAATAGWIALPAAAPSPGDGADREVADRDVTLTHAGGPTAVPSPRAEMMSGRKDM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39018; Mature: 38887
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIGVDRRAVLLTTGVLAVVPMSPESPTPAAGHETASSLHDACLGALRAAVANYETVDLA CCCCCCCCCCEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEHH TTASTLEPLEETSRTIPQQYRLRGRAAIDWMWLHAAVTTAAAAASYDRGRHGEAAARADR HHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH AASLARAAGDGPLAARALALRARVVRPHSPAVALQIAGSAARIAGRSPTRALISGKVAAS HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHCCCCCHHHHHHHHHHHH ACAAAGDAAGVRDAVARAWATMAELGEDVHGRPGFSLDTYSPADLALACAEALTTVGAAD HHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCH EAAPYLDRAASLIARSGQTGMIVSVRMAQSRAAIARDFPDRDEAVEHASDAVALAARRPA HHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCH EWVARLVRDVSDLAEIRTGHGFDDLVAATAGWIALPAAAPSPGDGADREVADRDVTLTHA HHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCHHCCCCEEEEEC GGPTAVPSPRAEMMSGRKDM CCCCCCCCCHHHHHCCCCCC >Mature Secondary Structure SIGVDRRAVLLTTGVLAVVPMSPESPTPAAGHETASSLHDACLGALRAAVANYETVDLA CCCCCCCCCEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEHH TTASTLEPLEETSRTIPQQYRLRGRAAIDWMWLHAAVTTAAAAASYDRGRHGEAAARADR HHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH AASLARAAGDGPLAARALALRARVVRPHSPAVALQIAGSAARIAGRSPTRALISGKVAAS HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHCCCCCHHHHHHHHHHHH ACAAAGDAAGVRDAVARAWATMAELGEDVHGRPGFSLDTYSPADLALACAEALTTVGAAD HHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCH EAAPYLDRAASLIARSGQTGMIVSVRMAQSRAAIARDFPDRDEAVEHASDAVALAARRPA HHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCH EWVARLVRDVSDLAEIRTGHGFDDLVAATAGWIALPAAAPSPGDGADREVADRDVTLTHA HHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCHHCCCCEEEEEC GGPTAVPSPRAEMMSGRKDM CCCCCCCCCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA