| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317531
Identifier: 158317531
GI number: 158317531
Start: 7029884
End: 7030219
Strand: Reverse
Name: 158317531
Synonym: Franean1_5787
Alternate gene names: NA
Gene position: 7030219-7029884 (Counterclockwise)
Preceding gene: 158317533
Following gene: 158317529
Centisome position: 78.27
GC content: 67.26
Gene sequence:
>336_bases GTGCGGAGGAGTCGAAACTCGCGCGGTCGTGAACCAGAAGATCCTGAGATGACGGTGCGCGAGTTTGTCTCGGCGCTCGC CTTCATCGCGCGGGATGTGCGGCGGCGTACGCCCAGGTCGGATCTCTATCTGCACTGCGATGTCTGCGGCGGTGCCACGC CGCACTCCAGCTATCGGCAGATCATCTCTGCGACCAAGGCGAATCCGACGTTCGTCGCCGCGCCTCCGGAGCCCATCTGC ACGGTGTGCCGCAACGCGCATCCTCGGCGACGAGCCGCCCTGCGACACGGCCGTCGTGTGTACCGGTCATCGGCGGCGCC GCTGGCACTCGGGTAG
Upstream 100 bases:
>100_bases CTTGATCGCTGGTGTGTACTCCCAAGCTGTTTTCGCTGCGATCCGGCATCTGAGGTCGATCGCTGGCAGACCGGTCGATC GGCCGGGATCATGGTGTGTC
Downstream 100 bases:
>100_bases ATCCCGGCGGCCGTGCCATGCGCAGTTCACCGTGCCTGCGTCCGCGCCGGCTGTGATCTGCCCATGGTGCAGCACCCAGC AGGACGGGCCAGCCAGGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 111; Mature: 111
Protein sequence:
>111_residues MRRSRNSRGREPEDPEMTVREFVSALAFIARDVRRRTPRSDLYLHCDVCGGATPHSSYRQIISATKANPTFVAAPPEPIC TVCRNAHPRRRAALRHGRRVYRSSAAPLALG
Sequences:
>Translated_111_residues MRRSRNSRGREPEDPEMTVREFVSALAFIARDVRRRTPRSDLYLHCDVCGGATPHSSYRQIISATKANPTFVAAPPEPIC TVCRNAHPRRRAALRHGRRVYRSSAAPLALG >Mature_111_residues MRRSRNSRGREPEDPEMTVREFVSALAFIARDVRRRTPRSDLYLHCDVCGGATPHSSYRQIISATKANPTFVAAPPEPIC TVCRNAHPRRRAALRHGRRVYRSSAAPLALG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12468; Mature: 12468
Theoretical pI: Translated: 11.77; Mature: 11.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRSRNSRGREPEDPEMTVREFVSALAFIARDVRRRTPRSDLYLHCDVCGGATPHSSYRQ CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHH IISATKANPTFVAAPPEPICTVCRNAHPRRRAALRHGRRVYRSSAAPLALG HHHHHCCCCEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRRSRNSRGREPEDPEMTVREFVSALAFIARDVRRRTPRSDLYLHCDVCGGATPHSSYRQ CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHH IISATKANPTFVAAPPEPICTVCRNAHPRRRAALRHGRRVYRSSAAPLALG HHHHHCCCCEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA