| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317529
Identifier: 158317529
GI number: 158317529
Start: 7026840
End: 7027259
Strand: Reverse
Name: 158317529
Synonym: Franean1_5784
Alternate gene names: NA
Gene position: 7027259-7026840 (Counterclockwise)
Preceding gene: 158317531
Following gene: 158317528
Centisome position: 78.24
GC content: 69.52
Gene sequence:
>420_bases ATGTCTCCGCCAGAGCGACTGCACGCCCACCATCCGACGGCCCGACAGGCTGGCGTGCCAGGTCAGGCCGAGGCGCAGGA ACAGGCCAAGACGCCAGGTCAGGCGGACGTACGTAGCCTCGCCGACATCCTGGCCGTCGCTCCGTGGACGGATCTGGAAC AGCACATCGATCAGCTCCGTGAGCGGGTCGACCGCGCGGTTCTCGCGTCGCATGCGCGGCGGGAACAGTTGCGCGCCGAG ATCCTTGCCGAGAATCCCGGCCTGCGGAGCCTCATTCGACGCCCCTCACACGAGGCATCGGCCTGGGCGAGGGATCTGCT GCGGTCCGGTGTCGTCGCTGCCGCCGACGGCACCCTGGCGGCGGTGCCGCTGCTGAGCGGGACGAAGATCCAGATCGGCG TCGTCGCGTCGTCGTCGTGA
Upstream 100 bases:
>100_bases CCGGAATTTACCGTTTTCCGCACCGAGTCGGCCCACCTGGTGCAACGATCTGGTGACCGGGTGGTGACGTATGCGCGGTT CACGGGGGAGGGCGTTGGTC
Downstream 100 bases:
>100_bases CGAACACCGGTGAGTCCGTTCGGCTGGTCACCCGCGTCTTCGAGCACGAACTCACCGCCCAGGGCGACACTGCCCGGGAG TTCTTCGACAACCTGCGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MSPPERLHAHHPTARQAGVPGQAEAQEQAKTPGQADVRSLADILAVAPWTDLEQHIDQLRERVDRAVLASHARREQLRAE ILAENPGLRSLIRRPSHEASAWARDLLRSGVVAAADGTLAAVPLLSGTKIQIGVVASSS
Sequences:
>Translated_139_residues MSPPERLHAHHPTARQAGVPGQAEAQEQAKTPGQADVRSLADILAVAPWTDLEQHIDQLRERVDRAVLASHARREQLRAE ILAENPGLRSLIRRPSHEASAWARDLLRSGVVAAADGTLAAVPLLSGTKIQIGVVASSS >Mature_138_residues SPPERLHAHHPTARQAGVPGQAEAQEQAKTPGQADVRSLADILAVAPWTDLEQHIDQLRERVDRAVLASHARREQLRAEI LAENPGLRSLIRRPSHEASAWARDLLRSGVVAAADGTLAAVPLLSGTKIQIGVVASSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14890; Mature: 14759
Theoretical pI: Translated: 7.98; Mature: 7.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPPERLHAHHPTARQAGVPGQAEAQEQAKTPGQADVRSLADILAVAPWTDLEQHIDQLR CCCCHHHHCCCCCHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH ERVDRAVLASHARREQLRAEILAENPGLRSLIRRPSHEASAWARDLLRSGVVAAADGTLA HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHCCCEECCCCCCH AVPLLSGTKIQIGVVASSS HHCCCCCCEEEEEEEECCC >Mature Secondary Structure SPPERLHAHHPTARQAGVPGQAEAQEQAKTPGQADVRSLADILAVAPWTDLEQHIDQLR CCCHHHHCCCCCHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH ERVDRAVLASHARREQLRAEILAENPGLRSLIRRPSHEASAWARDLLRSGVVAAADGTLA HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHCCCEECCCCCCH AVPLLSGTKIQIGVVASSS HHCCCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA