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The map label for this gene is 158317521

Identifier: 158317521

GI number: 158317521

Start: 7013884

End: 7014567

Strand: Reverse

Name: 158317521

Synonym: Franean1_5775

Alternate gene names: NA

Gene position: 7014567-7013884 (Counterclockwise)

Preceding gene: 158317522

Following gene: 158317520

Centisome position: 78.1

GC content: 72.81

Gene sequence:

>684_bases
GTGGAGGTTGAACAGATCGAGATCGACCAGGTCAAGCAGGCGGCGGTCCGGCGGCTGGCGGACCGGCGCCGCGTCGACCT
CTCGCCGAGCGCCCTGGGCGAGGCCGCCGGGATCGGTCTCGACCGGGTGACCGCATACTTCGCCGGCGAGGACGAGCTGC
TGACCACGCTCGTCCTCGACGCCTACGCCGGGATGGGCGACGGCGCGGAACGGGCCGGGGACGCGGCATCGGCCGCCGGC
GGCTCGCCGCTCGACCGGTGGGTCACGATCAGTAAGGGGGTCAGGAGCTGGGCGCTCGACCACCCGGACGAGTACGCGCT
GATCTGGGGGCAGCCGGTGCCCGGCTACCACGCTCCGGCAGAGACGATGGTCGTCGGGGCTCGCACCGTCGTGGCCCTGC
TGACGGTGCTGCGCGACGCGCAGCGAGACGGCGGGCTGGCGGACCAACCGCCGGTGCCGCGGCTGTCGGACGGCATGGCG
CGCAACGTCGCCGGGCTCGCCGCCGGCCTGTTGCAGGGCCTGCCCGACGGGGTCATCGCTCGGATTCTCGTGACCTGGAC
CCAGCTCCACGGGATGGTCGGGTTCGAGGTGTACGGCCACCTCGCTGGCGTGGCGGCCGACCCTGGCGCGTTCTTCGAGT
TCGCCGCACGGGAGATGGGAAAGTACGTCGGCCTGACGCGGTAA

Upstream 100 bases:

>100_bases
CGGTCGCGCCCAGTCGTTACCCCTGACGTAATCGACGAGAACGGTCGTCGTCTGCCACGATGCCGACATGAGCCGATCGA
GTACTCACGGTGACAGCTTG

Downstream 100 bases:

>100_bases
CCGTCAGGGATGGGTCAGCCGGGCGTCAGCGGAATTGGTGACAGTGGGCATCGAGATGTTTCCTCCCGAATGAGGTGTGA
TGCTAGAGAACGAGACTGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MEVEQIEIDQVKQAAVRRLADRRRVDLSPSALGEAAGIGLDRVTAYFAGEDELLTTLVLDAYAGMGDGAERAGDAASAAG
GSPLDRWVTISKGVRSWALDHPDEYALIWGQPVPGYHAPAETMVVGARTVVALLTVLRDAQRDGGLADQPPVPRLSDGMA
RNVAGLAAGLLQGLPDGVIARILVTWTQLHGMVGFEVYGHLAGVAADPGAFFEFAAREMGKYVGLTR

Sequences:

>Translated_227_residues
MEVEQIEIDQVKQAAVRRLADRRRVDLSPSALGEAAGIGLDRVTAYFAGEDELLTTLVLDAYAGMGDGAERAGDAASAAG
GSPLDRWVTISKGVRSWALDHPDEYALIWGQPVPGYHAPAETMVVGARTVVALLTVLRDAQRDGGLADQPPVPRLSDGMA
RNVAGLAAGLLQGLPDGVIARILVTWTQLHGMVGFEVYGHLAGVAADPGAFFEFAAREMGKYVGLTR
>Mature_227_residues
MEVEQIEIDQVKQAAVRRLADRRRVDLSPSALGEAAGIGLDRVTAYFAGEDELLTTLVLDAYAGMGDGAERAGDAASAAG
GSPLDRWVTISKGVRSWALDHPDEYALIWGQPVPGYHAPAETMVVGARTVVALLTVLRDAQRDGGLADQPPVPRLSDGMA
RNVAGLAAGLLQGLPDGVIARILVTWTQLHGMVGFEVYGHLAGVAADPGAFFEFAAREMGKYVGLTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 23962; Mature: 23962

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVEQIEIDQVKQAAVRRLADRRRVDLSPSALGEAAGIGLDRVTAYFAGEDELLTTLVLD
CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHH
AYAGMGDGAERAGDAASAAGGSPLDRWVTISKGVRSWALDHPDEYALIWGQPVPGYHAPA
HHCCCCCCHHHCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCH
ETMVVGARTVVALLTVLRDAQRDGGLADQPPVPRLSDGMARNVAGLAAGLLQGLPDGVIA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHH
RILVTWTQLHGMVGFEVYGHLAGVAADPGAFFEFAAREMGKYVGLTR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEVEQIEIDQVKQAAVRRLADRRRVDLSPSALGEAAGIGLDRVTAYFAGEDELLTTLVLD
CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHH
AYAGMGDGAERAGDAASAAGGSPLDRWVTISKGVRSWALDHPDEYALIWGQPVPGYHAPA
HHCCCCCCHHHCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCH
ETMVVGARTVVALLTVLRDAQRDGGLADQPPVPRLSDGMARNVAGLAAGLLQGLPDGVIA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHH
RILVTWTQLHGMVGFEVYGHLAGVAADPGAFFEFAAREMGKYVGLTR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]