Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158317516

Identifier: 158317516

GI number: 158317516

Start: 7009034

End: 7009390

Strand: Direct

Name: 158317516

Synonym: Franean1_5770

Alternate gene names: NA

Gene position: 7009034-7009390 (Clockwise)

Preceding gene: 158317512

Following gene: 158317530

Centisome position: 78.03

GC content: 66.39

Gene sequence:

>357_bases
GTGAGCCGGATCGAGAAAATCGCCGACCGCTATCTCGCCGTATGGAACGAGGCCGACCCGGGCCGTCGCCGCAAGGAAGT
CGGTGAGATATGGGCGGAAGACGGTCTCTACGCGAACACCAGCAACGAGTTCCTTGGCCACGACGGAATCGAGGCCGCCG
TCCGTGAGGCCCACGAAGAATTTGTCGCGGCGGGTTTCACGTTCAGGCTGAAGGCGGTCGCGGAGAATCACGACGCGGCC
CGCATCGGCTGGGAGATGGTGCCGTCCGGGGGCGGTGACCCGGTGGCCGCCGGGACGCAGTACCTGGTCTTCGCGGCCGA
CGACCGCATCCGCACCGACTACCAGTTCCCGGACTAG

Upstream 100 bases:

>100_bases
GCAGGTAATAGACAACGGCGGCCGCTGATTGCAAGACTCGACGGGCGTGGACGGGAACCGACCGTCTGCCGTGCCCGCAC
GTCCAGCCTGGAGGAATACC

Downstream 100 bases:

>100_bases
TGTAGTGCCGCATCAGGCTACGTTTGCCTTGGCGACCACGGCGCGGAGTTTCTTGTCGGCGGCGTGGCGGTTCCGCCAGC
CGAGGTAGCGGCGGATCATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MSRIEKIADRYLAVWNEADPGRRRKEVGEIWAEDGLYANTSNEFLGHDGIEAAVREAHEEFVAAGFTFRLKAVAENHDAA
RIGWEMVPSGGGDPVAAGTQYLVFAADDRIRTDYQFPD

Sequences:

>Translated_118_residues
MSRIEKIADRYLAVWNEADPGRRRKEVGEIWAEDGLYANTSNEFLGHDGIEAAVREAHEEFVAAGFTFRLKAVAENHDAA
RIGWEMVPSGGGDPVAAGTQYLVFAADDRIRTDYQFPD
>Mature_117_residues
SRIEKIADRYLAVWNEADPGRRRKEVGEIWAEDGLYANTSNEFLGHDGIEAAVREAHEEFVAAGFTFRLKAVAENHDAAR
IGWEMVPSGGGDPVAAGTQYLVFAADDRIRTDYQFPD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13145; Mature: 13013

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRIEKIADRYLAVWNEADPGRRRKEVGEIWAEDGLYANTSNEFLGHDGIEAAVREAHEE
CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHH
FVAAGFTFRLKAVAENHDAARIGWEMVPSGGGDPVAAGTQYLVFAADDRIRTDYQFPD
HHHCCHHEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
SRIEKIADRYLAVWNEADPGRRRKEVGEIWAEDGLYANTSNEFLGHDGIEAAVREAHEE
CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHH
FVAAGFTFRLKAVAENHDAARIGWEMVPSGGGDPVAAGTQYLVFAADDRIRTDYQFPD
HHHCCHHEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA