| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is actII-2 [H]
Identifier: 158317499
GI number: 158317499
Start: 6988186
End: 6989646
Strand: Reverse
Name: actII-2 [H]
Synonym: Franean1_5751
Alternate gene names: 158317499
Gene position: 6989646-6988186 (Counterclockwise)
Preceding gene: 158317501
Following gene: 158317498
Centisome position: 77.82
GC content: 71.25
Gene sequence:
>1461_bases ATGACCTCTGGCACGAGCACGCCCACCGCAACCGGGGAAGCATTGGCAGACCCGACTACGGCGGCCGAGGCCACAGCCTG GGGCACGCTGGCCGTGCTGATGGTCGGAACCTTCATCACCGTCCTCGACTACTTCATCGCCAACGTCGCCGCGCCGTCCG TCCAGCGTGACCTGAACGCCAGCTCGGCGCAGATCCAGGGCGTGATTGTCGGCTACGGCGTCGCGTTCACCGCCGGCATG ATCACCGGCGGCCGGCTGGGCGACGTCTACGGCCGTCGGCGCATGTTCGCGCTGGGCCTCCTGCTGTTCACGGTGGCCTC GGCGGCCTGTGGCGTCGCGCCCAACGCCGAAGCGCTGATCGTCGCTCGGGTGGTACAGGGAACCGCCGCCGCGCTGATGG TTCCGCAGGTGCTCGGCATCTTGGGCACGGTCTACACCGGGCCGAGTCGGGCGCAGGCATTCAACGTGTACGGCCTCGTC ATCGGGCTTGCCGGCGTGTTCGGGCAGGTGATCGGCGGAGTGCTCATCACGGTCGACGTCGCGGGCCTCGACTGGCGGGC GGTGTTCCTGCTGAACGTGCCGATCTGCCTGGTGGCGTTGGCCTACACCTACCGCGTGGTGCCCGAGTCGCGCGGCTCGG CCCGCACGCGTCTCGACCTGACCGGCGCGGCGTTGGTGACGGCGACGCTGGTGCTCCTGGTGGTCTCCCTGGTCGAAGGG CGCGAGCAGGGGTGGCCGGCGTGGAGCTTCGGCTGCCTGGCTCTCGCGGCGGTACTGTCCGGCGCGTCCGTCCTCCACCT GCGTCGCCGTGCCGCACGCGGCGCTGACCCGTTGATCGACCCGGCGTTGTTCCGGGGGCGCGGCTTCTCGGTAGGGCTGG CCGCCATGGTGGCCTACTTCCTGGCGATGGGTTCCTTCTTCTTCCTGCTGGCCCTCTACCTGCAGCAGGGCCGAGGCCTG TCGCCGCTGGAGTCCGGGCTGCTGTTCCTGGCACTGGGAGCGGGCTACTTCGGCTCGTCGTTGGCGTCGATGCAGCTTGT CGCGCGGATGGGCCGGTGGCTCGTGGTGGCCGGTCCGTTGACGATCGCGGTCGGCTACACGCTGGTCGGGATCACGGTCT GGGCGACCGGCTCGACCGGGAGCCCGGCGTGGCTGGTGCCGGCGTTGCTCGTTGCCGGGCTCGGCATGGGGATGACCACC GGCCCGCTCACGAACGTCGTCCTGACCGGTGTAGCGCCCGAACACGCCGCCTCCGCGTCGGGAGCGGCCAACACCGCGCA GGAGGGCGGTGCGGCGCTGGGCGTGGCGGTCGCTGGGGCGGTCTTCTACCCCGCCCTCGGCGTCGCGGCGCGCGCCACCG ACTATCCGGACGCCTTCGACGTCGCGTTGATCCCGCTGGTTGCCTGCTGTCTCGTCGCCGCGACGCTGGCGCTGTTGCTG CCCGGCCGCCGCGCGCAGTAG
Upstream 100 bases:
>100_bases TAGGCGTCGAATTACCTCTGACGTAATTGACGAGCCGACGGCGAGGCGTGGAGGGTGTGGCGACGCAGACATTTTTCGGC CAGCCTGTAGGAGATCGCCC
Downstream 100 bases:
>100_bases CCCGCATCCCACATCCGCAGCTCGAGGCTCGAGCTCCGCGCCGGCCGCAAGGAGGAGACGCCGCCATGCCAGTGGTCACC GTCCGGGACGGAACCGAACT
Product: major facilitator transporter
Products: Proton [Cytoplasm]; drug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 486; Mature: 485
Protein sequence:
>486_residues MTSGTSTPTATGEALADPTTAAEATAWGTLAVLMVGTFITVLDYFIANVAAPSVQRDLNASSAQIQGVIVGYGVAFTAGM ITGGRLGDVYGRRRMFALGLLLFTVASAACGVAPNAEALIVARVVQGTAAALMVPQVLGILGTVYTGPSRAQAFNVYGLV IGLAGVFGQVIGGVLITVDVAGLDWRAVFLLNVPICLVALAYTYRVVPESRGSARTRLDLTGAALVTATLVLLVVSLVEG REQGWPAWSFGCLALAAVLSGASVLHLRRRAARGADPLIDPALFRGRGFSVGLAAMVAYFLAMGSFFFLLALYLQQGRGL SPLESGLLFLALGAGYFGSSLASMQLVARMGRWLVVAGPLTIAVGYTLVGITVWATGSTGSPAWLVPALLVAGLGMGMTT GPLTNVVLTGVAPEHAASASGAANTAQEGGAALGVAVAGAVFYPALGVAARATDYPDAFDVALIPLVACCLVAATLALLL PGRRAQ
Sequences:
>Translated_486_residues MTSGTSTPTATGEALADPTTAAEATAWGTLAVLMVGTFITVLDYFIANVAAPSVQRDLNASSAQIQGVIVGYGVAFTAGM ITGGRLGDVYGRRRMFALGLLLFTVASAACGVAPNAEALIVARVVQGTAAALMVPQVLGILGTVYTGPSRAQAFNVYGLV IGLAGVFGQVIGGVLITVDVAGLDWRAVFLLNVPICLVALAYTYRVVPESRGSARTRLDLTGAALVTATLVLLVVSLVEG REQGWPAWSFGCLALAAVLSGASVLHLRRRAARGADPLIDPALFRGRGFSVGLAAMVAYFLAMGSFFFLLALYLQQGRGL SPLESGLLFLALGAGYFGSSLASMQLVARMGRWLVVAGPLTIAVGYTLVGITVWATGSTGSPAWLVPALLVAGLGMGMTT GPLTNVVLTGVAPEHAASASGAANTAQEGGAALGVAVAGAVFYPALGVAARATDYPDAFDVALIPLVACCLVAATLALLL PGRRAQ >Mature_485_residues TSGTSTPTATGEALADPTTAAEATAWGTLAVLMVGTFITVLDYFIANVAAPSVQRDLNASSAQIQGVIVGYGVAFTAGMI TGGRLGDVYGRRRMFALGLLLFTVASAACGVAPNAEALIVARVVQGTAAALMVPQVLGILGTVYTGPSRAQAFNVYGLVI GLAGVFGQVIGGVLITVDVAGLDWRAVFLLNVPICLVALAYTYRVVPESRGSARTRLDLTGAALVTATLVLLVVSLVEGR EQGWPAWSFGCLALAAVLSGASVLHLRRRAARGADPLIDPALFRGRGFSVGLAAMVAYFLAMGSFFFLLALYLQQGRGLS PLESGLLFLALGAGYFGSSLASMQLVARMGRWLVVAGPLTIAVGYTLVGITVWATGSTGSPAWLVPALLVAGLGMGMTTG PLTNVVLTGVAPEHAASASGAANTAQEGGAALGVAVAGAVFYPALGVAARATDYPDAFDVALIPLVACCLVAATLALLLP GRRAQ
Specific function: Promotes the efflux of actinorhodin [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. EmrB family [H]
Homologues:
Organism=Escherichia coli, GI1790195, Length=415, Percent_Identity=30.8433734939759, Blast_Score=143, Evalue=2e-35, Organism=Escherichia coli, GI87081983, Length=422, Percent_Identity=26.7772511848341, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1788710, Length=421, Percent_Identity=25.41567695962, Blast_Score=115, Evalue=6e-27, Organism=Escherichia coli, GI1789042, Length=416, Percent_Identity=27.4038461538462, Blast_Score=114, Evalue=1e-26, Organism=Escherichia coli, GI1788392, Length=425, Percent_Identity=27.0588235294118, Blast_Score=108, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6324954, Length=401, Percent_Identity=22.4438902743142, Blast_Score=64, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004638 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 49390; Mature: 49259
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSGTSTPTATGEALADPTTAAEATAWGTLAVLMVGTFITVLDYFIANVAAPSVQRDLNA CCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC SSAQIQGVIVGYGVAFTAGMITGGRLGDVYGRRRMFALGLLLFTVASAACGVAPNAEALI CCHHEEEEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH VARVVQGTAAALMVPQVLGILGTVYTGPSRAQAFNVYGLVIGLAGVFGQVIGGVLITVDV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE AGLDWRAVFLLNVPICLVALAYTYRVVPESRGSARTRLDLTGAALVTATLVLLVVSLVEG CCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHC REQGWPAWSFGCLALAAVLSGASVLHLRRRAARGADPLIDPALFRGRGFSVGLAAMVAYF CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHHHH LAMGSFFFLLALYLQQGRGLSPLESGLLFLALGAGYFGSSLASMQLVARMGRWLVVAGPL HHHHHHHHHHHHHHHCCCCCCHHHHCCEEEEECCCHHHHHHHHHHHHHHCCCEEEEECHH TIAVGYTLVGITVWATGSTGSPAWLVPALLVAGLGMGMTTGPLTNVVLTGVAPEHAASAS HHHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHEECCCCHHHCCCC GAANTAQEGGAALGVAVAGAVFYPALGVAARATDYPDAFDVALIPLVACCLVAATLALLL CCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC PGRRAQ CCCCCC >Mature Secondary Structure TSGTSTPTATGEALADPTTAAEATAWGTLAVLMVGTFITVLDYFIANVAAPSVQRDLNA CCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC SSAQIQGVIVGYGVAFTAGMITGGRLGDVYGRRRMFALGLLLFTVASAACGVAPNAEALI CCHHEEEEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH VARVVQGTAAALMVPQVLGILGTVYTGPSRAQAFNVYGLVIGLAGVFGQVIGGVLITVDV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE AGLDWRAVFLLNVPICLVALAYTYRVVPESRGSARTRLDLTGAALVTATLVLLVVSLVEG CCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHC REQGWPAWSFGCLALAAVLSGASVLHLRRRAARGADPLIDPALFRGRGFSVGLAAMVAYF CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHHHH LAMGSFFFLLALYLQQGRGLSPLESGLLFLALGAGYFGSSLASMQLVARMGRWLVVAGPL HHHHHHHHHHHHHHHCCCCCCHHHHCCEEEEECCCHHHHHHHHHHHHHHCCCEEEEECHH TIAVGYTLVGITVWATGSTGSPAWLVPALLVAGLGMGMTTGPLTNVVLTGVAPEHAASAS HHHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHEECCCCHHHCCCC GAANTAQEGGAALGVAVAGAVFYPALGVAARATDYPDAFDVALIPLVACCLVAATLALLL CCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC PGRRAQ CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; drug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + drug [Cytoplasm] = Proton [Cytoplasm] + drug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1878971; 12000953 [H]