| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317492
Identifier: 158317492
GI number: 158317492
Start: 6979925
End: 6981028
Strand: Direct
Name: 158317492
Synonym: Franean1_5744
Alternate gene names: NA
Gene position: 6979925-6981028 (Clockwise)
Preceding gene: 158317491
Following gene: 158317493
Centisome position: 77.71
GC content: 71.92
Gene sequence:
>1104_bases GTGACGGACCCGGGCAGCGGACACGCGAGCTGGCGGCACGCCACGGAGGACAAAGCTCCGGGTGGACGACACCGCGGGCA TTCCGCCACGGAGTGGCCCATCGATACGGCGCCTACCACCGGCCCATACGACTACCGCGCCGTCCCGCCCGACCACGTGA GGCGAACCGTGGACGGTCCACCAACCGCACCGCTCGTCATCCGCCAGACGGGACGCCACGCGGCACGCAACGCGACCCCG GCCAGGAGGTCGTCCCCGCGGCCGGGCGCGGCCGCGGAGCGGCTTCGTCCGGGCGACCGGCATGAGCACGAGCAGATCGA GGGCCCCTATCCGTCTTCGACGTCGTACACCGACTCGTCTCCGTTCCGGGTCGATACCGGGGGCGTGTCACGCACGACGG GTCGGAGACGAACCGATCCTCGGATCATGGCCGACATGGGGGCAGGCAGGATCATGGCGGCGTTCGCCTCGCTCGGCGCC GCCGCCACCCATGTCGCTGTCGCGCCGAGCCACTTCGGTGACTGGCCGCTGTCAGGGATGTTCTTCTTCGCGACGGCGGT CTTCCAGGCGGGATGGGCGCTCGCTGTGATGCGGGGGGCCGGCGGGCGGACGATGGCAGCGGGCCTGCTGGTCAACACCG GGTCGATCCTGTTGTGGGCTGTCAGCCGGACCTCCGGGCTACCCGTCGGCCCCCACTCCGGCATAGCCGAACGGGTCGAC AGAGTCGACCTCACCACGGTCGCGTTCGAGGCAGCGGTCTGCGTCCTCGCGCTGTGGGGCCTGTGGTCCCGGCACACGCG CGGGTTCCGCTCCTCGTTCAGCGCGGCCGTCATGATCGGTGCCGCTGGCGCCGGCGTTACCGGCCTCGCGCTGCCCGCGG TAGAACTCGCCGGTTCGCACAGCCACGGCCACGAGACCACGGACGAGTCCGTCCCGCACTCCCACGGTCAGGACGGGGAG CATCCAGCGACCCCAACCCCAGGCGGCGGCGAAGGCGGTACGCCCCCCGCACCACCGACGGTGGGAGAGACCGGCGAACC GGAACGGCCTCAGCCCGCGTCGAGTCACACCCATCGCCCCGGCACCGCACCGCACGACGACTGA
Upstream 100 bases:
>100_bases AGCAGGCGCGCACCACGGTCGAACTCGACCTCAGCCAGAACAGCCCGCAGGACGTGGTCAAGGTGATCGAAGAACTCGGC TACCGGGCCTCGCCGCTGCT
Downstream 100 bases:
>100_bases GTCTGGCTTCCCGCACTTCCGCGCTGGCGGGTGACGTAGGACGGCACGCTCGGTCGACCGGGGCGGGGCGATAGACGTGG GACGGCGAGTCGACCGCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MTDPGSGHASWRHATEDKAPGGRHRGHSATEWPIDTAPTTGPYDYRAVPPDHVRRTVDGPPTAPLVIRQTGRHAARNATP ARRSSPRPGAAAERLRPGDRHEHEQIEGPYPSSTSYTDSSPFRVDTGGVSRTTGRRRTDPRIMADMGAGRIMAAFASLGA AATHVAVAPSHFGDWPLSGMFFFATAVFQAGWALAVMRGAGGRTMAAGLLVNTGSILLWAVSRTSGLPVGPHSGIAERVD RVDLTTVAFEAAVCVLALWGLWSRHTRGFRSSFSAAVMIGAAGAGVTGLALPAVELAGSHSHGHETTDESVPHSHGQDGE HPATPTPGGGEGGTPPAPPTVGETGEPERPQPASSHTHRPGTAPHDD
Sequences:
>Translated_367_residues MTDPGSGHASWRHATEDKAPGGRHRGHSATEWPIDTAPTTGPYDYRAVPPDHVRRTVDGPPTAPLVIRQTGRHAARNATP ARRSSPRPGAAAERLRPGDRHEHEQIEGPYPSSTSYTDSSPFRVDTGGVSRTTGRRRTDPRIMADMGAGRIMAAFASLGA AATHVAVAPSHFGDWPLSGMFFFATAVFQAGWALAVMRGAGGRTMAAGLLVNTGSILLWAVSRTSGLPVGPHSGIAERVD RVDLTTVAFEAAVCVLALWGLWSRHTRGFRSSFSAAVMIGAAGAGVTGLALPAVELAGSHSHGHETTDESVPHSHGQDGE HPATPTPGGGEGGTPPAPPTVGETGEPERPQPASSHTHRPGTAPHDD >Mature_366_residues TDPGSGHASWRHATEDKAPGGRHRGHSATEWPIDTAPTTGPYDYRAVPPDHVRRTVDGPPTAPLVIRQTGRHAARNATPA RRSSPRPGAAAERLRPGDRHEHEQIEGPYPSSTSYTDSSPFRVDTGGVSRTTGRRRTDPRIMADMGAGRIMAAFASLGAA ATHVAVAPSHFGDWPLSGMFFFATAVFQAGWALAVMRGAGGRTMAAGLLVNTGSILLWAVSRTSGLPVGPHSGIAERVDR VDLTTVAFEAAVCVLALWGLWSRHTRGFRSSFSAAVMIGAAGAGVTGLALPAVELAGSHSHGHETTDESVPHSHGQDGEH PATPTPGGGEGGTPPAPPTVGETGEPERPQPASSHTHRPGTAPHDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38271; Mature: 38140
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPGSGHASWRHATEDKAPGGRHRGHSATEWPIDTAPTTGPYDYRAVPPDHVRRTVDGP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC PTAPLVIRQTGRHAARNATPARRSSPRPGAAAERLRPGDRHEHEQIEGPYPSSTSYTDSS CCCCEEEECCCCHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCC PFRVDTGGVSRTTGRRRTDPRIMADMGAGRIMAAFASLGAAATHVAVAPSHFGDWPLSGM CEEEECCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCHHH FFFATAVFQAGWALAVMRGAGGRTMAAGLLVNTGSILLWAVSRTSGLPVGPHSGIAERVD HHHHHHHHHCCCEEEEEECCCCCEEEHHEEEECCCEEEEEEECCCCCCCCCCCCHHHHHH RVDLTTVAFEAAVCVLALWGLWSRHTRGFRSSFSAAVMIGAAGAGVTGLALPAVELAGSH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCC SHGHETTDESVPHSHGQDGEHPATPTPGGGEGGTPPAPPTVGETGEPERPQPASSHTHRP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GTAPHDD CCCCCCC >Mature Secondary Structure TDPGSGHASWRHATEDKAPGGRHRGHSATEWPIDTAPTTGPYDYRAVPPDHVRRTVDGP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC PTAPLVIRQTGRHAARNATPARRSSPRPGAAAERLRPGDRHEHEQIEGPYPSSTSYTDSS CCCCEEEECCCCHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCC PFRVDTGGVSRTTGRRRTDPRIMADMGAGRIMAAFASLGAAATHVAVAPSHFGDWPLSGM CEEEECCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCHHH FFFATAVFQAGWALAVMRGAGGRTMAAGLLVNTGSILLWAVSRTSGLPVGPHSGIAERVD HHHHHHHHHCCCEEEEEECCCCCEEEHHEEEECCCEEEEEEECCCCCCCCCCCCHHHHHH RVDLTTVAFEAAVCVLALWGLWSRHTRGFRSSFSAAVMIGAAGAGVTGLALPAVELAGSH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCC SHGHETTDESVPHSHGQDGEHPATPTPGGGEGGTPPAPPTVGETGEPERPQPASSHTHRP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GTAPHDD CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA