| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317488
Identifier: 158317488
GI number: 158317488
Start: 6975535
End: 6976134
Strand: Reverse
Name: 158317488
Synonym: Franean1_5740
Alternate gene names: NA
Gene position: 6976134-6975535 (Counterclockwise)
Preceding gene: 158317489
Following gene: 158317487
Centisome position: 77.67
GC content: 67.0
Gene sequence:
>600_bases GTGCGAAGAAGACACCACCTTGGGTTCGCAGCCGTAGCGCTGGCCCTGACAGCCATGCTTGCGGCGTGCGGGGGCGATGG CACCCCGACGACCCCTTCGTCCGCGCTGGCAGGAAGTGGCAGCGATGTCAGCGCCAGCGACCACAACGACGCGGACGTGA TGTTCGCCCAGATGATGATTCCGCACCACCAGCAGGCCGTGGAGATGGCGGAGCTGGCACCCGGGCGAGCTGCCAACCCG GCGGTGCTCACGCTGGCGAAGCAGATCGGGACCGCGCAAGCACCAGAGATCAAGACGATGACCGGCTGGCTTGAGGCATG GGGCGAACCCACCGCCATGCCCGGCGCCGGCGGCCACGGCACCAACGACATGGGAATGATGTCGGAGGACGACACGGCGG CCCTTCAAGGGGCGTCCGGGTCGGGCTTCGACCGCATGTTCCTGGAGATGATGATCCAGCACCACGGGGGTGCGATCGAG ATGGCACGCACCGAACAGCGGGACGGGCAGTTCCCCGACGCCGTGGCCCTGGCCAGGACGATCGAGTCCACGCAGACCAC AGAGGTCGAGACCATGAAGGTCCTGCTCGGTACCAGATAG
Upstream 100 bases:
>100_bases CGCCTGTGAGCGGACCTGCGTCGGACGTCGCGCACGCCTGTCAGCACGCTCGACGGCTCCGGCCTCAGCTCCGTTGGCAA CCCGACACCGAGGACGACTC
Downstream 100 bases:
>100_bases CCGAGCAGGGCCCTGGGGCACCGGCCGCGCGCCGGTGCCCCAGGGCATCTCGGATCCCAGGTGCGACACTCGGCACGACG AACGCGATGTCGGTCGCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Secreted Protein
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MRRRHHLGFAAVALALTAMLAACGGDGTPTTPSSALAGSGSDVSASDHNDADVMFAQMMIPHHQQAVEMAELAPGRAANP AVLTLAKQIGTAQAPEIKTMTGWLEAWGEPTAMPGAGGHGTNDMGMMSEDDTAALQGASGSGFDRMFLEMMIQHHGGAIE MARTEQRDGQFPDAVALARTIESTQTTEVETMKVLLGTR
Sequences:
>Translated_199_residues MRRRHHLGFAAVALALTAMLAACGGDGTPTTPSSALAGSGSDVSASDHNDADVMFAQMMIPHHQQAVEMAELAPGRAANP AVLTLAKQIGTAQAPEIKTMTGWLEAWGEPTAMPGAGGHGTNDMGMMSEDDTAALQGASGSGFDRMFLEMMIQHHGGAIE MARTEQRDGQFPDAVALARTIESTQTTEVETMKVLLGTR >Mature_199_residues MRRRHHLGFAAVALALTAMLAACGGDGTPTTPSSALAGSGSDVSASDHNDADVMFAQMMIPHHQQAVEMAELAPGRAANP AVLTLAKQIGTAQAPEIKTMTGWLEAWGEPTAMPGAGGHGTNDMGMMSEDDTAALQGASGSGFDRMFLEMMIQHHGGAIE MARTEQRDGQFPDAVALARTIESTQTTEVETMKVLLGTR
Specific function: Unknown
COG id: COG3544
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20806; Mature: 20806
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 8.0 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 8.0 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRRHHLGFAAVALALTAMLAACGGDGTPTTPSSALAGSGSDVSASDHNDADVMFAQMMI CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHC PHHQQAVEMAELAPGRAANPAVLTLAKQIGTAQAPEIKTMTGWLEAWGEPTAMPGAGGHG CCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC TNDMGMMSEDDTAALQGASGSGFDRMFLEMMIQHHGGAIEMARTEQRDGQFPDAVALART CCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHCCCCCCHHHHHHHH IESTQTTEVETMKVLLGTR HHHCCCHHHHHHHHHHCCC >Mature Secondary Structure MRRRHHLGFAAVALALTAMLAACGGDGTPTTPSSALAGSGSDVSASDHNDADVMFAQMMI CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHC PHHQQAVEMAELAPGRAANPAVLTLAKQIGTAQAPEIKTMTGWLEAWGEPTAMPGAGGHG CCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC TNDMGMMSEDDTAALQGASGSGFDRMFLEMMIQHHGGAIEMARTEQRDGQFPDAVALART CCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHCCCCCCHHHHHHHH IESTQTTEVETMKVLLGTR HHHCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA