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The map label for this gene is iap [H]

Identifier: 158317487

GI number: 158317487

Start: 6973619

End: 6974722

Strand: Reverse

Name: iap [H]

Synonym: Franean1_5739

Alternate gene names: 158317487

Gene position: 6974722-6973619 (Counterclockwise)

Preceding gene: 158317488

Following gene: 158317484

Centisome position: 77.65

GC content: 65.85

Gene sequence:

>1104_bases
ATGCTGTCTGCGCAGAGTGCGCAGCTTGATGCAGAAAGACGCCGACAGGAAGGGCGCGGTCGCCACCGGGCTCCGTCCGT
CCCCACAACGTCGAGCCGGGCCAGAGCGCGGGCCCGCGCGGTCGCAGCCGTGACCACTGGCACAGTCGTGGTCTCCGGTA
TGGCTCTCGCCGGATGTGCCCCGGAGCCCAGCTCGGACGGCGCGTTGGACGACAGCACAAGCACCACGTCACTGACGCTT
GCCACCCAGATCGGGTCCCGGCCGGCGACCGACGGCGCCATCCAGGCCGCCGCCGCGGCGGACGGCACGCCCGGTACCGT
CCTTGACGCCACGACGGACATCTCTGCACCGACTCTGTCGTCCAAAATCGACGTGGGTCTGCGCGTGACGAACCCCGACG
TGACAGTCAACGCGGACGAGCCTGTCAACATCGGCTTCTCGCTCTTCAACGAGGAGACCCACGCCCCGCTGGCGGACCAG
CTCATCAAGGTGCAGGTCAAACTACCCACCGGCTGGGCGACCTTCCTGCACCTGACCACCGACGAGCATGGCATCGCCTC
CTACACGGCGCGTGTCCTCACCACCACGAACGTCACGGTGATCTTCGATGGAACGGACGCCCTGCAATCCGCCCGCTCCG
AGAACGAAGCGACCCTGCGCGTGCGCCCAGCCGCGCCACCGGCGTCCATCAGGGCCTCCCGCGGCACAGTGAATGCTGAA
ACTCCGACGATCGGCATCGATGTCCCGGCCAACACGCTCGGGGAAAAAGCCGTATACCTGGCGTCCCTGCAAGCCGGTAA
GCCCTACGTTTACGGGGCCACCGGACCGTACAGCTTCGACTGCTCCGGTTTGGTGCAATACATCTACAAGCAGCTCGGCA
AGACACTTCCCCGTACCACCGACCAGCAGTACGCGGCGACAACCAGGGTCGCCCAGGGCTCCGAACAGCCAGGCGATCTC
ATCTTCTTCGGCCAGCCTGGCGCGATCTATCATATGGGGATCTACGCCGGTGGCGGGAAAATGTGGGTCGCGCCGAAGAC
CGGTGACGTGGTGAAGCTCCAGACCATCTGGGCAGACTCCTACTCGGTCGGTCGGGTGACCTGA

Upstream 100 bases:

>100_bases
TCGGCGCCCTTGGGGCGAAGCCGGACACGCATGAGGCGTTCGGCCGGGCTCCCAGCCCGAACCCGACAGCTCACCTCGCA
GGCGTAGGGGAAGGACCACC

Downstream 100 bases:

>100_bases
GTCTGTCTCGCTGACTATCGGGGCTCCGGTCGGCTACGGGCGGATGCTCGTAGCCGACCGTGACGTGGCTGGCGTGCGAT
CAAGATCGCAATGGTGAGTG

Product: NLP/P60 protein

Products: NA

Alternate protein names: Invasion-associated protein [H]

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MLSAQSAQLDAERRRQEGRGRHRAPSVPTTSSRARARARAVAAVTTGTVVVSGMALAGCAPEPSSDGALDDSTSTTSLTL
ATQIGSRPATDGAIQAAAAADGTPGTVLDATTDISAPTLSSKIDVGLRVTNPDVTVNADEPVNIGFSLFNEETHAPLADQ
LIKVQVKLPTGWATFLHLTTDEHGIASYTARVLTTTNVTVIFDGTDALQSARSENEATLRVRPAAPPASIRASRGTVNAE
TPTIGIDVPANTLGEKAVYLASLQAGKPYVYGATGPYSFDCSGLVQYIYKQLGKTLPRTTDQQYAATTRVAQGSEQPGDL
IFFGQPGAIYHMGIYAGGGKMWVAPKTGDVVKLQTIWADSYSVGRVT

Sequences:

>Translated_367_residues
MLSAQSAQLDAERRRQEGRGRHRAPSVPTTSSRARARARAVAAVTTGTVVVSGMALAGCAPEPSSDGALDDSTSTTSLTL
ATQIGSRPATDGAIQAAAAADGTPGTVLDATTDISAPTLSSKIDVGLRVTNPDVTVNADEPVNIGFSLFNEETHAPLADQ
LIKVQVKLPTGWATFLHLTTDEHGIASYTARVLTTTNVTVIFDGTDALQSARSENEATLRVRPAAPPASIRASRGTVNAE
TPTIGIDVPANTLGEKAVYLASLQAGKPYVYGATGPYSFDCSGLVQYIYKQLGKTLPRTTDQQYAATTRVAQGSEQPGDL
IFFGQPGAIYHMGIYAGGGKMWVAPKTGDVVKLQTIWADSYSVGRVT
>Mature_367_residues
MLSAQSAQLDAERRRQEGRGRHRAPSVPTTSSRARARARAVAAVTTGTVVVSGMALAGCAPEPSSDGALDDSTSTTSLTL
ATQIGSRPATDGAIQAAAAADGTPGTVLDATTDISAPTLSSKIDVGLRVTNPDVTVNADEPVNIGFSLFNEETHAPLADQ
LIKVQVKLPTGWATFLHLTTDEHGIASYTARVLTTTNVTVIFDGTDALQSARSENEATLRVRPAAPPASIRASRGTVNAE
TPTIGIDVPANTLGEKAVYLASLQAGKPYVYGATGPYSFDCSGLVQYIYKQLGKTLPRTTDQQYAATTRVAQGSEQPGDL
IFFGQPGAIYHMGIYAGGGKMWVAPKTGDVVKLQTIWADSYSVGRVT

Specific function: This major extracellular protein may be involved in the invasion of non-professional phagocytic cells by Listeria [H]

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 LysM repeats [H]

Homologues:

Organism=Escherichia coli, GI1786421, Length=176, Percent_Identity=32.9545454545455, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1787944, Length=104, Percent_Identity=37.5, Blast_Score=73, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064
- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR003646
- InterPro:   IPR013247 [H]

Pfam domain/function: PF01476 LysM; PF00877 NLPC_P60; PF08239 SH3_3 [H]

EC number: NA

Molecular weight: Translated: 38337; Mature: 38337

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSAQSAQLDAERRRQEGRGRHRAPSVPTTSSRARARARAVAAVTTGTVVVSGMALAGCA
CCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHEEEEEECCEEEEECEEEECCC
PEPSSDGALDDSTSTTSLTLATQIGSRPATDGAIQAAAAADGTPGTVLDATTDISAPTLS
CCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEHHCCCCCCCCEEECCCCCCCCCCC
SKIDVGLRVTNPDVTVNADEPVNIGFSLFNEETHAPLADQLIKVQVKLPTGWATFLHLTT
CCCEEEEEEECCCEEEECCCCCCCCEEEECCCCCCCHHCCEEEEEEECCCCEEEEEEEEC
DEHGIASYTARVLTTTNVTVIFDGTDALQSARSENEATLRVRPAAPPASIRASRGTVNAE
CCCCHHHEEEEEEEECEEEEEECCHHHHHHHCCCCCEEEEEECCCCCCCEEECCCEECCC
TPTIGIDVPANTLGEKAVYLASLQAGKPYVYGATGPYSFDCSGLVQYIYKQLGKTLPRTT
CCEEEEECCCHHCCCCEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCC
DQQYAATTRVAQGSEQPGDLIFFGQPGAIYHMGIYAGGGKMWVAPKTGDVVKLQTIWADS
CHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEEEECCCEEEEECCCCCEEEEEEEEECC
YSVGRVT
CCCCCCC
>Mature Secondary Structure
MLSAQSAQLDAERRRQEGRGRHRAPSVPTTSSRARARARAVAAVTTGTVVVSGMALAGCA
CCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHEEEEEECCEEEEECEEEECCC
PEPSSDGALDDSTSTTSLTLATQIGSRPATDGAIQAAAAADGTPGTVLDATTDISAPTLS
CCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEHHCCCCCCCCEEECCCCCCCCCCC
SKIDVGLRVTNPDVTVNADEPVNIGFSLFNEETHAPLADQLIKVQVKLPTGWATFLHLTT
CCCEEEEEEECCCEEEECCCCCCCCEEEECCCCCCCHHCCEEEEEEECCCCEEEEEEEEC
DEHGIASYTARVLTTTNVTVIFDGTDALQSARSENEATLRVRPAAPPASIRASRGTVNAE
CCCCHHHEEEEEEEECEEEEEECCHHHHHHHCCCCCEEEEEECCCCCCCEEECCCEECCC
TPTIGIDVPANTLGEKAVYLASLQAGKPYVYGATGPYSFDCSGLVQYIYKQLGKTLPRTT
CCEEEEECCCHHCCCCEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCC
DQQYAATTRVAQGSEQPGDLIFFGQPGAIYHMGIYAGGGKMWVAPKTGDVVKLQTIWADS
CHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEEEECCCEEEEECCCCCEEEEEEEEECC
YSVGRVT
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1514809; 1459966 [H]