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The map label for this gene is crtB [H]

Identifier: 158317464

GI number: 158317464

Start: 6937609

End: 6938511

Strand: Reverse

Name: crtB [H]

Synonym: Franean1_5716

Alternate gene names: 158317464

Gene position: 6938511-6937609 (Counterclockwise)

Preceding gene: 158317465

Following gene: 158317463

Centisome position: 77.25

GC content: 72.65

Gene sequence:

>903_bases
ATGAGCGCGGGTGTCCCGGGCAGCTCCACCGTCGCCGAGGCCTACGCCTCCTGCGAGGCGTTGACGCGGGAGGCCGCGCG
GAACTTCAGCTACGGCATCCGCCTGCTGCCGGCGGAGAAGCGGGGCGCGCTGTCCGCGGTGTACGCCCTGGCGCGTCGCC
TCGACGACATCGGCGACGGCGACCTGCCAGATGAGGAGAAGCTCGCCGGCCTGGAGAAGGTCCGCGCAGACGTCCGCGTG
CTGGACATCAACAGCTCCGACCCGGTGATGGTGGCGCTCGCGGACACCGCCCGCCGCTTCCCCGTCCCGATGGAAGCCTT
CATCGAGCTCGCCGACGGGGTCGAGAGCGATGTCCACGGGGTCCCCTACGAGACGTTCGACGACATGGTCGGGTACTGCC
GGCTGGTGGCGGGCACCATCGGCCGGCTCTCGCTGGGCATCTTCGGCGTGGACGGGTCGGCCGGTGACGCCCGCTCGGCC
GAGATCGCCGACGCGCTCGGCGTGGCGCTCCAGCAGACCAACATCCTGCGCGACGTCCGCGAGGACCTCCTCAACGGCCG
CATCTACCTGCCCTCGACGGAGCTGGAGAAAGCCGGCGTCACCCTGGTGGTGAGCCCGGCCGGGCGCCTCGGTGGGCCGG
AGGACGCACTGGTGGACTATCTGCGCGACTGCGCCGCGCGCGCCGACGAGTGGTACACGCGGGGCCTGGCGCTGCTCGGC
CTGCTCGACCGGCGCAGCGCCGCCTGCTGCGGTGCCATGGCCGGGATCTACCTGCGCCTGAACCGGCGCATCCGGCAGGA
CCCCACCGCGGTCCTGGAACGCCGGCTGTCACTGCCGGGCTGGGAGAAGGCGGTCGTGGCCGCCCGCAGCCTCGCCGGCA
GATCGGAGGCGAGAGCGGCATGA

Upstream 100 bases:

>100_bases
CCGTTCCCACCACCACCCCCGGCGGGGGCGCCGCGGTGGCGAGTGCCGTCCCGGCTCCGGCGCCCGCCGGATCCGACGTC
GACGTCCCGGAGGGTGCCAG

Downstream 100 bases:

>100_bases
GCGCCGGGGGGGACACGCGGCCGGGTCACCGGCCGGGAGATCGGGCCGGGACCGGTGCGGCGGCGCGGGGGCGGCGGGTG
GTCGTCATCGGCGGCGGCCT

Product: squalene/phytoene synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MSAGVPGSSTVAEAYASCEALTREAARNFSYGIRLLPAEKRGALSAVYALARRLDDIGDGDLPDEEKLAGLEKVRADVRV
LDINSSDPVMVALADTARRFPVPMEAFIELADGVESDVHGVPYETFDDMVGYCRLVAGTIGRLSLGIFGVDGSAGDARSA
EIADALGVALQQTNILRDVREDLLNGRIYLPSTELEKAGVTLVVSPAGRLGGPEDALVDYLRDCAARADEWYTRGLALLG
LLDRRSAACCGAMAGIYLRLNRRIRQDPTAVLERRLSLPGWEKAVVAARSLAGRSEARAA

Sequences:

>Translated_300_residues
MSAGVPGSSTVAEAYASCEALTREAARNFSYGIRLLPAEKRGALSAVYALARRLDDIGDGDLPDEEKLAGLEKVRADVRV
LDINSSDPVMVALADTARRFPVPMEAFIELADGVESDVHGVPYETFDDMVGYCRLVAGTIGRLSLGIFGVDGSAGDARSA
EIADALGVALQQTNILRDVREDLLNGRIYLPSTELEKAGVTLVVSPAGRLGGPEDALVDYLRDCAARADEWYTRGLALLG
LLDRRSAACCGAMAGIYLRLNRRIRQDPTAVLERRLSLPGWEKAVVAARSLAGRSEARAA
>Mature_299_residues
SAGVPGSSTVAEAYASCEALTREAARNFSYGIRLLPAEKRGALSAVYALARRLDDIGDGDLPDEEKLAGLEKVRADVRVL
DINSSDPVMVALADTARRFPVPMEAFIELADGVESDVHGVPYETFDDMVGYCRLVAGTIGRLSLGIFGVDGSAGDARSAE
IADALGVALQQTNILRDVREDLLNGRIYLPSTELEKAGVTLVVSPAGRLGGPEDALVDYLRDCAARADEWYTRGLALLGL
LDRRSAACCGAMAGIYLRLNRRIRQDPTAVLERRLSLPGWEKAVVAARSLAGRSEARAA

Specific function: Catalyzes the reaction from prephytoene diphosphate to phytoene [H]

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phytoene/squalene synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002060
- InterPro:   IPR017828
- InterPro:   IPR019845
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00494 SQS_PSY [H]

EC number: =2.5.1.32 [H]

Molecular weight: Translated: 32037; Mature: 31906

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: PS01044 SQUALEN_PHYTOEN_SYN_1 ; PS01045 SQUALEN_PHYTOEN_SYN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAGVPGSSTVAEAYASCEALTREAARNFSYGIRLLPAEKRGALSAVYALARRLDDIGDG
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCC
DLPDEEKLAGLEKVRADVRVLDINSSDPVMVALADTARRFPVPMEAFIELADGVESDVHG
CCCCHHHHHHHHHHHCCEEEEEECCCCCEEEEECCHHHCCCCCHHHHHHHHHCCCCCCCC
VPYETFDDMVGYCRLVAGTIGRLSLGIFGVDGSAGDARSAEIADALGVALQQTNILRDVR
CCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
EDLLNGRIYLPSTELEKAGVTLVVSPAGRLGGPEDALVDYLRDCAARADEWYTRGLALLG
HHHHCCEEECCCCCHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLDRRSAACCGAMAGIYLRLNRRIRQDPTAVLERRLSLPGWEKAVVAARSLAGRSEARAA
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHCCCC
>Mature Secondary Structure 
SAGVPGSSTVAEAYASCEALTREAARNFSYGIRLLPAEKRGALSAVYALARRLDDIGDG
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCC
DLPDEEKLAGLEKVRADVRVLDINSSDPVMVALADTARRFPVPMEAFIELADGVESDVHG
CCCCHHHHHHHHHHHCCEEEEEECCCCCEEEEECCHHHCCCCCHHHHHHHHHCCCCCCCC
VPYETFDDMVGYCRLVAGTIGRLSLGIFGVDGSAGDARSAEIADALGVALQQTNILRDVR
CCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
EDLLNGRIYLPSTELEKAGVTLVVSPAGRLGGPEDALVDYLRDCAARADEWYTRGLALLG
HHHHCCEEECCCCCHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLDRRSAACCGAMAGIYLRLNRRIRQDPTAVLERRLSLPGWEKAVVAARSLAGRSEARAA
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]