Click here to switch to the map view.

The map label for this gene is ureF [H]

Identifier: 158317446

GI number: 158317446

Start: 6916840

End: 6917574

Strand: Direct

Name: ureF [H]

Synonym: Franean1_5698

Alternate gene names: 158317446

Gene position: 6916840-6917574 (Clockwise)

Preceding gene: 158317444

Following gene: 158317449

Centisome position: 77.01

GC content: 77.96

Gene sequence:

>735_bases
GTGGTGGGCAAAGATAGGCGGATGGACGCGGACCCACCAATGACAGGTCACGTGGAGGCACGGGCAGCGCTGCTGCTCCT
GGCCGACGGGCGTCTACCCGCCGGCGGGCATGCCCACTCCGGAGGCGTCGAGGCCGCCGTGCTCGACGGGAGCATCACCG
GGCTCAGGGACCTCGCCGAGTTCCTTCGCGGCCGCCTCGCGACGTCCGGGCTGCTCGCCGCGTCCTTCGCGGCGGCGGTG
TGCCGGTCGGTCCGTGCGGCCGGCCCCGCTACCGAGCTGGCGGCGGACGTCCTCGCCGTCTTCGAGGCCGAGGTCGACGC
CCGCACGCCCTCGCCCGCCCAGCGGGCCGCCAGCCGCGCGCAGGGCCGCACCCTGATGCGGGTGGCCCGCGCGGCCTGGG
AGGTCCCGGCGCATCCGGCGGCGCCACACCACTGTGTCGCGCTCGGCATCGTCGCCGCCGCGGCCGGGCTCGAGCCGCGG
GACGCGGCGCTGGCGGCCGCCCACGCGTCCGTCAACGGCCCGGCGACGGCGGCCGTCCGCCTGCTCGGGCTCGACCCGCT
GGCCGTCACCGGTGTCCTCGCCGAGATCGCCGCCGAGGTCGACCGCATCGCGGCGGCCGCCGACACGGCGTCGGCGCTGC
GCGCCCCGGAGCGCCTGCCCGCCGGGAGCGCGCCCCAGCTGGACCTGCTGGCCGAACGGCACCGCACCGCCGAGGTCCGG
ATGTTCACCTCCTGA

Upstream 100 bases:

>100_bases
GGATCTGTCGCCGACGTGACCTACTGCCGGACCCGGTCCGGCGGTCGATTGCGACGGCGCACGCGATCCGGACCGGCGGC
CCGGGCCGGGGGCACAGGGC

Downstream 100 bases:

>100_bases
TGGAGCTACCGGGTCAGCGGGCGGCGGGCCGCGCGCTGGCGGCGAAGGCCGCCGCGGTCAGCTCCCGGAAGCAGCGCAGG
GCGCCCTCGCCCTCCAGATG

Product: urease accessory protein UreF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MVGKDRRMDADPPMTGHVEARAALLLLADGRLPAGGHAHSGGVEAAVLDGSITGLRDLAEFLRGRLATSGLLAASFAAAV
CRSVRAAGPATELAADVLAVFEAEVDARTPSPAQRAASRAQGRTLMRVARAAWEVPAHPAAPHHCVALGIVAAAAGLEPR
DAALAAAHASVNGPATAAVRLLGLDPLAVTGVLAEIAAEVDRIAAAADTASALRAPERLPAGSAPQLDLLAERHRTAEVR
MFTS

Sequences:

>Translated_244_residues
MVGKDRRMDADPPMTGHVEARAALLLLADGRLPAGGHAHSGGVEAAVLDGSITGLRDLAEFLRGRLATSGLLAASFAAAV
CRSVRAAGPATELAADVLAVFEAEVDARTPSPAQRAASRAQGRTLMRVARAAWEVPAHPAAPHHCVALGIVAAAAGLEPR
DAALAAAHASVNGPATAAVRLLGLDPLAVTGVLAEIAAEVDRIAAAADTASALRAPERLPAGSAPQLDLLAERHRTAEVR
MFTS
>Mature_244_residues
MVGKDRRMDADPPMTGHVEARAALLLLADGRLPAGGHAHSGGVEAAVLDGSITGLRDLAEFLRGRLATSGLLAASFAAAV
CRSVRAAGPATELAADVLAVFEAEVDARTPSPAQRAASRAQGRTLMRVARAAWEVPAHPAAPHHCVALGIVAAAAGLEPR
DAALAAAHASVNGPATAAVRLLGLDPLAVTGVLAEIAAEVDRIAAAADTASALRAPERLPAGSAPQLDLLAERHRTAEVR
MFTS

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter [H]

COG id: COG0830

COG function: function code O; Urease accessory protein UreF

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002639 [H]

Pfam domain/function: PF01730 UreF [H]

EC number: NA

Molecular weight: Translated: 24739; Mature: 24739

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGKDRRMDADPPMTGHVEARAALLLLADGRLPAGGHAHSGGVEAAVLDGSITGLRDLAE
CCCCCCCCCCCCCCCCCHHHHEEEEEEECCCCCCCCCCCCCCCEEEEECCCHHHHHHHHH
FLRGRLATSGLLAASFAAAVCRSVRAAGPATELAADVLAVFEAEVDARTPSPAQRAASRA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
QGRTLMRVARAAWEVPAHPAAPHHCVALGIVAAAAGLEPRDAALAAAHASVNGPATAAVR
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHH
LLGLDPLAVTGVLAEIAAEVDRIAAAADTASALRAPERLPAGSAPQLDLLAERHRTAEVR
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHCCCEEE
MFTS
EECC
>Mature Secondary Structure
MVGKDRRMDADPPMTGHVEARAALLLLADGRLPAGGHAHSGGVEAAVLDGSITGLRDLAE
CCCCCCCCCCCCCCCCCHHHHEEEEEEECCCCCCCCCCCCCCCEEEEECCCHHHHHHHHH
FLRGRLATSGLLAASFAAAVCRSVRAAGPATELAADVLAVFEAEVDARTPSPAQRAASRA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
QGRTLMRVARAAWEVPAHPAAPHHCVALGIVAAAAGLEPRDAALAAAHASVNGPATAAVR
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHH
LLGLDPLAVTGVLAEIAAEVDRIAAAADTASALRAPERLPAGSAPQLDLLAERHRTAEVR
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHCCCEEE
MFTS
EECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA