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The map label for this gene is 158317445

Identifier: 158317445

GI number: 158317445

Start: 6915350

End: 6916267

Strand: Reverse

Name: 158317445

Synonym: Franean1_5697

Alternate gene names: NA

Gene position: 6916267-6915350 (Counterclockwise)

Preceding gene: 158317447

Following gene: 158317440

Centisome position: 77.0

GC content: 72.22

Gene sequence:

>918_bases
ATGGGATCGTCCGTGCTCACACCGTTCGCCGAGCTGGGGGCCTTTCGGCCCACGGACGCCACCCCGCCGGTGGCGGCCGC
CGGACTCGATCCGGGCCAGCTCGATCTGGACGAGATCGTGGCGTTCTACCGGCGGTACGGGTTCGTGATCCTCCGCGGTG
TCCTGGGCGAGCCGCTCACCACCCAGATCGAGACCGAGTGCGCCGCCGCCCAGGCCGGTGTGCTCTCCGGTGCTCTTCCC
GCCCGCCACGGCTCCACCCAGTACCTCGACGACGCCGGCAAGGCCGCGCGCTTCGTCAACTACGTCGAGCACGTCGAGGA
GCTCGCGCCGTCCGTGCGCGCGGCGGCGGCCCATCCGGTGCTGGTGGACGTCGTCCGTAACCTGATCGGTCCCGGGGCGG
GCCCGGGAATCTGGCTGAACGACTCGGACAAGGCCGGCATCATCTACCAGGACGCCCGCCCGGGCCGCGAGTCCGGCTAC
AGCCGCATCGGGTGGCACTCCGACTGGCAGGCGATGCCCAGCCTGGACATCTGGCCCGGGCTGGCGTTCACCATCCACAT
CGACGCGACGAGCCCGGCGAACGGCTTCCTGCGGATGGTGCCCGGCAGCCACCAGTGGGCCACACCCGCCCCGTACCGCA
ACATCAACGGTGTGGCCGTCCCGGCCGACGCCCGCCCGGCCGGCGGGTACACCGACACGCCGCCGCCGTTCGAGATGCCG
CTCGGGTTCGAGAAGGTCCCCGGCGAGATCGCGGTGTACGCCGACCGGGGCGACGTCCTGCTCCACGACGCCTACACCTG
GCACGCGGCGGCACGGGCGACCGACGACTCGGCCGTGCGCCGGCACGTGCGCGGCTCGTACTTCGCCGGGGACGAGTCGT
CCTACCGCCCGCAGTTCGTCAAGAACGCCGCACGCTGA

Upstream 100 bases:

>100_bases
CCGTCAGGCATCCGCTCACATCGTCAGGCACCTGCCCACACCGCCAGGCATCCGCCCGACATCTGTCCGGCACCGTCCGA
CGTGCCGCTGGAGGCAACCG

Downstream 100 bases:

>100_bases
TGCCGGGCACGGTGCTGTGGCCGCGCCCGAGGTACGTCTCCCGCAGGTGGTGGACGTCCTCGACGGGCAGCTCCACGCCC
GCCGGCACGACGAGATAGGC

Product: phytanoyl-CoA dioxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MGSSVLTPFAELGAFRPTDATPPVAAAGLDPGQLDLDEIVAFYRRYGFVILRGVLGEPLTTQIETECAAAQAGVLSGALP
ARHGSTQYLDDAGKAARFVNYVEHVEELAPSVRAAAAHPVLVDVVRNLIGPGAGPGIWLNDSDKAGIIYQDARPGRESGY
SRIGWHSDWQAMPSLDIWPGLAFTIHIDATSPANGFLRMVPGSHQWATPAPYRNINGVAVPADARPAGGYTDTPPPFEMP
LGFEKVPGEIAVYADRGDVLLHDAYTWHAAARATDDSAVRRHVRGSYFAGDESSYRPQFVKNAAR

Sequences:

>Translated_305_residues
MGSSVLTPFAELGAFRPTDATPPVAAAGLDPGQLDLDEIVAFYRRYGFVILRGVLGEPLTTQIETECAAAQAGVLSGALP
ARHGSTQYLDDAGKAARFVNYVEHVEELAPSVRAAAAHPVLVDVVRNLIGPGAGPGIWLNDSDKAGIIYQDARPGRESGY
SRIGWHSDWQAMPSLDIWPGLAFTIHIDATSPANGFLRMVPGSHQWATPAPYRNINGVAVPADARPAGGYTDTPPPFEMP
LGFEKVPGEIAVYADRGDVLLHDAYTWHAAARATDDSAVRRHVRGSYFAGDESSYRPQFVKNAAR
>Mature_304_residues
GSSVLTPFAELGAFRPTDATPPVAAAGLDPGQLDLDEIVAFYRRYGFVILRGVLGEPLTTQIETECAAAQAGVLSGALPA
RHGSTQYLDDAGKAARFVNYVEHVEELAPSVRAAAAHPVLVDVVRNLIGPGAGPGIWLNDSDKAGIIYQDARPGRESGYS
RIGWHSDWQAMPSLDIWPGLAFTIHIDATSPANGFLRMVPGSHQWATPAPYRNINGVAVPADARPAGGYTDTPPPFEMPL
GFEKVPGEIAVYADRGDVLLHDAYTWHAAARATDDSAVRRHVRGSYFAGDESSYRPQFVKNAAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32658; Mature: 32527

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSSVLTPFAELGAFRPTDATPPVAAAGLDPGQLDLDEIVAFYRRYGFVILRGVLGEPLT
CCCCCCCCHHHHCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
TQIETECAAAQAGVLSGALPARHGSTQYLDDAGKAARFVNYVEHVEELAPSVRAAAAHPV
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LVDVVRNLIGPGAGPGIWLNDSDKAGIIYQDARPGRESGYSRIGWHSDWQAMPSLDIWPG
HHHHHHHHHCCCCCCCEEECCCCCCCEEEECCCCCHHCCCCCCCCCCCCCCCCCCCCCCC
LAFTIHIDATSPANGFLRMVPGSHQWATPAPYRNINGVAVPADARPAGGYTDTPPPFEMP
EEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC
LGFEKVPGEIAVYADRGDVLLHDAYTWHAAARATDDSAVRRHVRGSYFAGDESSYRPQFV
CCCCCCCCCEEEEECCCCEEEECCEEHHHHHCCCCHHHHHHHHCCCEECCCCCCCCHHHH
KNAAR
HHCCC
>Mature Secondary Structure 
GSSVLTPFAELGAFRPTDATPPVAAAGLDPGQLDLDEIVAFYRRYGFVILRGVLGEPLT
CCCCCCCHHHHCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
TQIETECAAAQAGVLSGALPARHGSTQYLDDAGKAARFVNYVEHVEELAPSVRAAAAHPV
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LVDVVRNLIGPGAGPGIWLNDSDKAGIIYQDARPGRESGYSRIGWHSDWQAMPSLDIWPG
HHHHHHHHHCCCCCCCEEECCCCCCCEEEECCCCCHHCCCCCCCCCCCCCCCCCCCCCCC
LAFTIHIDATSPANGFLRMVPGSHQWATPAPYRNINGVAVPADARPAGGYTDTPPPFEMP
EEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC
LGFEKVPGEIAVYADRGDVLLHDAYTWHAAARATDDSAVRRHVRGSYFAGDESSYRPQFV
CCCCCCCCCEEEEECCCCEEEECCEEHHHHHCCCCHHHHHHHHCCCEECCCCCCCCHHHH
KNAAR
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA