| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is vanA [H]
Identifier: 158317433
GI number: 158317433
Start: 6902441
End: 6903502
Strand: Direct
Name: vanA [H]
Synonym: Franean1_5685
Alternate gene names: 158317433
Gene position: 6902441-6903502 (Clockwise)
Preceding gene: 158317426
Following gene: 158317434
Centisome position: 76.85
GC content: 74.76
Gene sequence:
>1062_bases ATGACCGGTCGCCTGACCAACACCGACCCGGCGCTGCGGCACGGCTGGCACCCGGTCGCCCGGTCGCCCGAGCTCGCCGA CGAGCCGATCGCCGTCCGGCTGCTCGGCGAGCCGTGGGTGCTGGCCCGGCTCGACGACCAGGTGGCGGCCTTCGCCGACT GGTGCCCGCACCGGCTCGCCCCGCTGTCGGCGGGACGGGTCGAGGGCCACGAGCTCGTCTGCGGCTACCACGGATGGCGG TTCGTCGCGTCCGGGGAGTGCACCGCGGTACCGGCGCTCGGCCCGGGAATACCGGCGCCGCGGCGGGCCCGCGCCATCCC GCCGTGGGGGGTGACCGAGCGGCACGGGCTGGTGTGGATCGCGCCCGCGGAGCCGTTCGCCGACATCATCGAGCTGCCGG AGGCGGCCGAGGACGGGTTCGACGACGCCTGGCTGCCCGCCGCGCGCACGACGGCCTGCGCGGGCCTGCTCGCCGACAAC TTCCTCGACACCGCGCACTTCCCGTTCGTGCACGCCGCCACCATCGGCGCCGGCGAGGAGACCGTCGTCGCGCCGTACCG GGTGGACGCCGACGGCGACGGCTTCCTGGTCCGGATGGATCAGGAGGTCGCCAACCCGGAGGATCCGGGGGTCGCGGCCG GGCTCCGTCCGCTCATCCAACGCCGCACGTCGACGTACGTGTACCGCCCGCCGTTCATGCTGCGGCTGCGGCTGGAGTAC CCCGACGCCGGGATCACCAACACGATCCTGTTCTGCCTGCAGCCCGAGGAGGCCGCCGCGACCCGCGTCTACACCCGCAT CCTGCGCGACGACCTGGGCGGTGATCCCGCCCGGCTGGCCGAGGCCGTCCGCTTCGAGCAGGCGGTGCTCGACGAGGACC TCGCCCTGCAGGAGCGCTTCACCATCGACGGACTCCCGCTGATCTCCGGGGACGGTGGGACGGCCGCGGAGGTCAGCATC CGCGCGGACGCGGCGGGCGTGGCGCTGCGCCGGGTGCTGGCCGCTGTCGTCGCCAGGGCAGCCCGCAGCTCTCCCACCAG GGCAGCGGATATCCGACACTGA
Upstream 100 bases:
>100_bases GCTTCGGTGATGGGATGGCGCCGAGAACCGGAGCCGAGACCGGAGCGGAGACAGGGACGGATACCGGAGCGGGAGATCTG ACCGCCGGGAGGCAAACGCG
Downstream 100 bases:
>100_bases AGCCGGCACGGCGGACGGCGGCACCGACCTACCATGTGATCAGGCAGGTGGCCGACGTGACAGTGGCCGACATGAAGGGG GCCGACGTGACAGTGGCCGA
Product: Rieske (2Fe-2S) domain-containing protein
Products: NA
Alternate protein names: 4-hydroxy-3-methoxybenzoate demethylase [H]
Number of amino acids: Translated: 353; Mature: 352
Protein sequence:
>353_residues MTGRLTNTDPALRHGWHPVARSPELADEPIAVRLLGEPWVLARLDDQVAAFADWCPHRLAPLSAGRVEGHELVCGYHGWR FVASGECTAVPALGPGIPAPRRARAIPPWGVTERHGLVWIAPAEPFADIIELPEAAEDGFDDAWLPAARTTACAGLLADN FLDTAHFPFVHAATIGAGEETVVAPYRVDADGDGFLVRMDQEVANPEDPGVAAGLRPLIQRRTSTYVYRPPFMLRLRLEY PDAGITNTILFCLQPEEAAATRVYTRILRDDLGGDPARLAEAVRFEQAVLDEDLALQERFTIDGLPLISGDGGTAAEVSI RADAAGVALRRVLAAVVARAARSSPTRAADIRH
Sequences:
>Translated_353_residues MTGRLTNTDPALRHGWHPVARSPELADEPIAVRLLGEPWVLARLDDQVAAFADWCPHRLAPLSAGRVEGHELVCGYHGWR FVASGECTAVPALGPGIPAPRRARAIPPWGVTERHGLVWIAPAEPFADIIELPEAAEDGFDDAWLPAARTTACAGLLADN FLDTAHFPFVHAATIGAGEETVVAPYRVDADGDGFLVRMDQEVANPEDPGVAAGLRPLIQRRTSTYVYRPPFMLRLRLEY PDAGITNTILFCLQPEEAAATRVYTRILRDDLGGDPARLAEAVRFEQAVLDEDLALQERFTIDGLPLISGDGGTAAEVSI RADAAGVALRRVLAAVVARAARSSPTRAADIRH >Mature_352_residues TGRLTNTDPALRHGWHPVARSPELADEPIAVRLLGEPWVLARLDDQVAAFADWCPHRLAPLSAGRVEGHELVCGYHGWRF VASGECTAVPALGPGIPAPRRARAIPPWGVTERHGLVWIAPAEPFADIIELPEAAEDGFDDAWLPAARTTACAGLLADNF LDTAHFPFVHAATIGAGEETVVAPYRVDADGDGFLVRMDQEVANPEDPGVAAGLRPLIQRRTSTYVYRPPFMLRLRLEYP DAGITNTILFCLQPEEAAATRVYTRILRDDLGGDPARLAEAVRFEQAVLDEDLALQERFTIDGLPLISGDGGTAAEVSIR ADAAGVALRRVLAAVVARAARSSPTRAADIRH
Specific function: Unknown
COG id: COG4638
COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Rieske domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017941 - InterPro: IPR015881 [H]
Pfam domain/function: PF00355 Rieske [H]
EC number: =1.14.13.82 [H]
Molecular weight: Translated: 38097; Mature: 37966
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGRLTNTDPALRHGWHPVARSPELADEPIAVRLLGEPWVLARLDDQVAAFADWCPHRLA CCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCHHHHHHHHHCCHHCC PLSAGRVEGHELVCGYHGWRFVASGECTAVPALGPGIPAPRRARAIPPWGVTERHGLVWI CCCCCCCCCCEEEEEECCEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE APAEPFADIIELPEAAEDGFDDAWLPAARTTACAGLLADNFLDTAHFPFVHAATIGAGEE ECCCCHHHHHHCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC TVVAPYRVDADGDGFLVRMDQEVANPEDPGVAAGLRPLIQRRTSTYVYRPPFMLRLRLEY EEEEEEEECCCCCEEEEEECHHHCCCCCCCHHHHHHHHHHHHHCCEEECCCEEEEEEEEC PDAGITNTILFCLQPEEAAATRVYTRILRDDLGGDPARLAEAVRFEQAVLDEDLALQERF CCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHC TIDGLPLISGDGGTAAEVSIRADAAGVALRRVLAAVVARAARSSPTRAADIRH EECCCEEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TGRLTNTDPALRHGWHPVARSPELADEPIAVRLLGEPWVLARLDDQVAAFADWCPHRLA CCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCHHHHHHHHHCCHHCC PLSAGRVEGHELVCGYHGWRFVASGECTAVPALGPGIPAPRRARAIPPWGVTERHGLVWI CCCCCCCCCCEEEEEECCEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE APAEPFADIIELPEAAEDGFDDAWLPAARTTACAGLLADNFLDTAHFPFVHAATIGAGEE ECCCCHHHHHHCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC TVVAPYRVDADGDGFLVRMDQEVANPEDPGVAAGLRPLIQRRTSTYVYRPPFMLRLRLEY EEEEEEEECCCCCEEEEEECHHHCCCCCCCHHHHHHHHHHHHHCCEEECCCEEEEEEEEC PDAGITNTILFCLQPEEAAATRVYTRILRDDLGGDPARLAEAVRFEQAVLDEDLALQERF CCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHC TIDGLPLISGDGGTAAEVSIRADAAGVALRRVLAAVVARAARSSPTRAADIRH EECCCEEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9098058 [H]