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The map label for this gene is nudF [H]

Identifier: 158317406

GI number: 158317406

Start: 6868560

End: 6869306

Strand: Reverse

Name: nudF [H]

Synonym: Franean1_5657

Alternate gene names: 158317406

Gene position: 6869306-6868560 (Counterclockwise)

Preceding gene: 158317407

Following gene: 158317405

Centisome position: 76.48

GC content: 74.03

Gene sequence:

>747_bases
GTGGCCTCCGTCTCGTCGGCGAACGTGACGTCCGGCGCGACTGGCGGCGACCCGGCCCGGATACCGGCCGTCGCCGTCAG
CGTCGATGTCGTCCTGCTGACCCTGCGCGCCGGACGGCTGTGCGTCCTTGTCATCCAGCGCGACAGCGAGCCGTTCCGCG
GTTGCTGGGCGCTGCCCGGCGGCTTCGTCGGACCGGACGAGGACCTCGACTCCTCCGCGCTGCGCCAGCTCGCCGAGGAG
ACCGGGGTGACCACCGCCGGCCACCTCGAGCAGCTGCGCACCTACGGCTGCCCGACCCGGGACCCGCGGACCCGGGTCGT
CAGCGTCGCCTATTTGGCCCTGCTGCCGAACCTCCCGCAGCCCACCGCGAGCGGGAACGGACCGCAGGCCCGCTGGTGGC
CGGTCGAGGACCTGGGCTCCCCGGACGGTCCTACCCTGGCCTTCGACCATCCGCAGATCGTCTCGGACGGAGTCGAGCGG
GCGCGCGGCAAACTCGAGTACACGTCGCTGGCGGCCGCCTTCTGCGAGGAGCCGTTCACCCTGGCCGACCTGCGCCGGGT
GTACGAGGCGGCCTGGGGCGTGGTCCTGGACCCGCCCAACTTCCGGCGCAAGGTGCTCTCCACCCCGGGCTTCGTCGTCG
CGGTCGGCCAGCGGGCCTCCCCACGCGGCGGCGGCCGTCCAGCCGAGCTCTACCGCCTCGGCTCCGCGACCGCCCTACAC
CCCCCGCTACTCCGCCGCTCGGTTTAG

Upstream 100 bases:

>100_bases
CCGGTGAAGCCGCGGGCACCGCGGACAGGGGCGCGCCGGCACGCCTGTCGGGAAGAGGGGTGCCGGCGCGGGTGCCGGGG
CGGACGGCCAGACTTGACCG

Downstream 100 bases:

>100_bases
ACGTCCACCAACAGCCGATCCAGTCGGTTCCGGCGCCTTTGGGGTCGCCGGAGCTCCCTGTCCTGGCGTGCATGAGGGTC
CGGGCTTGCGGGGCCGGGTG

Product: NUDIX hydrolase

Products: NA

Alternate protein names: ADP-ribose diphosphatase; ADP-ribose phosphohydrolase; Adenosine diphosphoribose pyrophosphatase; ADPR-PPase [H]

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MASVSSANVTSGATGGDPARIPAVAVSVDVVLLTLRAGRLCVLVIQRDSEPFRGCWALPGGFVGPDEDLDSSALRQLAEE
TGVTTAGHLEQLRTYGCPTRDPRTRVVSVAYLALLPNLPQPTASGNGPQARWWPVEDLGSPDGPTLAFDHPQIVSDGVER
ARGKLEYTSLAAAFCEEPFTLADLRRVYEAAWGVVLDPPNFRRKVLSTPGFVVAVGQRASPRGGGRPAELYRLGSATALH
PPLLRRSV

Sequences:

>Translated_248_residues
MASVSSANVTSGATGGDPARIPAVAVSVDVVLLTLRAGRLCVLVIQRDSEPFRGCWALPGGFVGPDEDLDSSALRQLAEE
TGVTTAGHLEQLRTYGCPTRDPRTRVVSVAYLALLPNLPQPTASGNGPQARWWPVEDLGSPDGPTLAFDHPQIVSDGVER
ARGKLEYTSLAAAFCEEPFTLADLRRVYEAAWGVVLDPPNFRRKVLSTPGFVVAVGQRASPRGGGRPAELYRLGSATALH
PPLLRRSV
>Mature_247_residues
ASVSSANVTSGATGGDPARIPAVAVSVDVVLLTLRAGRLCVLVIQRDSEPFRGCWALPGGFVGPDEDLDSSALRQLAEET
GVTTAGHLEQLRTYGCPTRDPRTRVVSVAYLALLPNLPQPTASGNGPQARWWPVEDLGSPDGPTLAFDHPQIVSDGVERA
RGKLEYTSLAAAFCEEPFTLADLRRVYEAAWGVVLDPPNFRRKVLSTPGFVVAVGQRASPRGGGRPAELYRLGSATALHP
PLLRRSV

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: =3.6.1.13 [H]

Molecular weight: Translated: 26388; Mature: 26257

Theoretical pI: Translated: 7.39; Mature: 7.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASVSSANVTSGATGGDPARIPAVAVSVDVVLLTLRAGRLCVLVIQRDSEPFRGCWALPG
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCEEEEEEECCCCCCCEEECCCC
GFVGPDEDLDSSALRQLAEETGVTTAGHLEQLRTYGCPTRDPRTRVVSVAYLALLPNLPQ
CCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCC
PTASGNGPQARWWPVEDLGSPDGPTLAFDHPQIVSDGVERARGKLEYTSLAAAFCEEPFT
CCCCCCCCCCEECCHHHCCCCCCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
LADLRRVYEAAWGVVLDPPNFRRKVLSTPGFVVAVGQRASPRGGGRPAELYRLGSATALH
HHHHHHHHHHHCCEEECCCHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHEECCCCCCCC
PPLLRRSV
CHHHHCCC
>Mature Secondary Structure 
ASVSSANVTSGATGGDPARIPAVAVSVDVVLLTLRAGRLCVLVIQRDSEPFRGCWALPG
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCEEEEEEECCCCCCCEEECCCC
GFVGPDEDLDSSALRQLAEETGVTTAGHLEQLRTYGCPTRDPRTRVVSVAYLALLPNLPQ
CCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCC
PTASGNGPQARWWPVEDLGSPDGPTLAFDHPQIVSDGVERARGKLEYTSLAAAFCEEPFT
CCCCCCCCCCEECCHHHCCCCCCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
LADLRRVYEAAWGVVLDPPNFRRKVLSTPGFVVAVGQRASPRGGGRPAELYRLGSATALH
HHHHHHHHHHHCCEEECCCHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHEECCCCCCCC
PPLLRRSV
CHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9694840 [H]