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The map label for this gene is yxjL [H]

Identifier: 158317392

GI number: 158317392

Start: 6856414

End: 6857025

Strand: Reverse

Name: yxjL [H]

Synonym: Franean1_5643

Alternate gene names: 158317392

Gene position: 6857025-6856414 (Counterclockwise)

Preceding gene: 158317393

Following gene: 158317390

Centisome position: 76.34

GC content: 61.93

Gene sequence:

>612_bases
GTGTCCGCGCCGATTCGTGTCCTTGTCGTCGACGACCACGTGCTTTCCCGTCGCGAGCTGGAGGTGGCGCTGGCGGCCGA
GGCCGACATCGAGGTCGTGGGCAGCGCGGTGAACAGCCCGGCGGCCGTGACGCTCGGCTCCGAATCTCGTCCGGATGTTG
CGCTCGTGGATGTCGAAGAGCCACACGAAGACGGCATTCGTGCAGTGAGTGCGATCAAGCGTGCTGTTTCACCCGTGCGG
ATCCTGATATTGGCGACGAGTGACGATGAAGCTCACCTTTTCGGTGCCGTCAGGGCGGGTGCCGTGGGCTACCTGTTGAA
GCCGCGGCCGATGGACGAGCTCACTGCGGCCGTCCGGTCGGTTCACAATGGGGTGAGCATCATCGGTCCGGGAGTGGCAT
CGCAGGTCATGAAAGAATTCGCCGCCATGGCACGCTCGGAAAAGTCGCCGGCAATGCCACACCTTACCGTCCGCGAGTTG
GATGTTCTCAAGCTCATGGTCGGGGGGTGCGCGAACCAGGGGATTTCTCGCCGCCTGTTGATCAGTGAGAACACGGTGAA
AAATCATATCCGGAACATCCTGGAGAAGCTCCAGTTCTCGGCCTGGATGTGA

Upstream 100 bases:

>100_bases
CCAGGTAGTGGGCTGAGTCGCCGTCGCCCGCCTGCGCCAACCTGGCCGGGCGCGCGCCGAACGCGCTGATTCGCCCGACT
ACCTGCTTTAGGATGCTCCC

Downstream 100 bases:

>100_bases
GTGGGCATCACTTACTGGGCTACGGCTCGTCCGTCAGAAACCGCCGGAAAACCATCATGGGTCGTCCTGGGCCGTTGTAG
TCAGGGACGGGACCGTCGAC

Product: two component LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MSAPIRVLVVDDHVLSRRELEVALAAEADIEVVGSAVNSPAAVTLGSESRPDVALVDVEEPHEDGIRAVSAIKRAVSPVR
ILILATSDDEAHLFGAVRAGAVGYLLKPRPMDELTAAVRSVHNGVSIIGPGVASQVMKEFAAMARSEKSPAMPHLTVREL
DVLKLMVGGCANQGISRRLLISENTVKNHIRNILEKLQFSAWM

Sequences:

>Translated_203_residues
MSAPIRVLVVDDHVLSRRELEVALAAEADIEVVGSAVNSPAAVTLGSESRPDVALVDVEEPHEDGIRAVSAIKRAVSPVR
ILILATSDDEAHLFGAVRAGAVGYLLKPRPMDELTAAVRSVHNGVSIIGPGVASQVMKEFAAMARSEKSPAMPHLTVREL
DVLKLMVGGCANQGISRRLLISENTVKNHIRNILEKLQFSAWM
>Mature_202_residues
SAPIRVLVVDDHVLSRRELEVALAAEADIEVVGSAVNSPAAVTLGSESRPDVALVDVEEPHEDGIRAVSAIKRAVSPVRI
LILATSDDEAHLFGAVRAGAVGYLLKPRPMDELTAAVRSVHNGVSIIGPGVASQVMKEFAAMARSEKSPAMPHLTVRELD
VLKLMVGGCANQGISRRLLISENTVKNHIRNILEKLQFSAWM

Specific function: Probable member of the two-component regulatory system yxjM/yxjL [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788521, Length=196, Percent_Identity=36.734693877551, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1786747, Length=195, Percent_Identity=26.6666666666667, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1787473, Length=187, Percent_Identity=30.4812834224599, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1788222, Length=200, Percent_Identity=31, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1788712, Length=199, Percent_Identity=25.6281407035176, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI1790102, Length=196, Percent_Identity=29.0816326530612, Blast_Score=64, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR011990
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 21738; Mature: 21607

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPIRVLVVDDHVLSRRELEVALAAEADIEVVGSAVNSPAAVTLGSESRPDVALVDVEE
CCCCEEEEEECCCHHCHHHHEEEEECCCCHHHHHHCCCCCEEEEECCCCCCCEEEEECCC
PHEDGIRAVSAIKRAVSPVRILILATSDDEAHLFGAVRAGAVGYLLKPRPMDELTAAVRS
CCHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHCCEEEEECCCCHHHHHHHHHH
VHNGVSIIGPGVASQVMKEFAAMARSEKSPAMPHLTVRELDVLKLMVGGCANQGISRRLL
HHCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEE
ISENTVKNHIRNILEKLQFSAWM
ECCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SAPIRVLVVDDHVLSRRELEVALAAEADIEVVGSAVNSPAAVTLGSESRPDVALVDVEE
CCCEEEEEECCCHHCHHHHEEEEECCCCHHHHHHCCCCCEEEEECCCCCCCEEEEECCC
PHEDGIRAVSAIKRAVSPVRILILATSDDEAHLFGAVRAGAVGYLLKPRPMDELTAAVRS
CCHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHCCEEEEECCCCHHHHHHHHHH
VHNGVSIIGPGVASQVMKEFAAMARSEKSPAMPHLTVRELDVLKLMVGGCANQGISRRLL
HHCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEE
ISENTVKNHIRNILEKLQFSAWM
ECCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8978088; 8969509; 9384377 [H]