| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317390
Identifier: 158317390
GI number: 158317390
Start: 6855150
End: 6855476
Strand: Reverse
Name: 158317390
Synonym: Franean1_5641
Alternate gene names: NA
Gene position: 6855476-6855150 (Counterclockwise)
Preceding gene: 158317392
Following gene: 158317389
Centisome position: 76.32
GC content: 62.39
Gene sequence:
>327_bases GTGGCGATGGCCGTGGTGCGGCCATTGATCCAGATGGGATGCGGATCGCGCTATTCTGCTGCCGCGGGCAGAAGAATCGG GGGGATCATGCACGGCAACGAGTTCGCGACGATGGAATGGATCTGGGATCAAGGTTCCATCCGAATCAACCTGCCTGGGG GCCGGGAGATGATGGTGGCCGGTTCCTACAACGAGGTGGTAGCGGAGCTCGGCAAACTTGGTGGGCAGGGCTGGGATGTC GCCTCGTCAACCGCATCCAGTAACTGGATCTTCTGGACGTTGCGGCGGGCCTCCTACGCGCATGACCGGGCACTGGGAAC CCGCTAG
Upstream 100 bases:
>100_bases ACCACCTGGCGGCCGTCGCTGGTGAGCGGGTGTCGGGGCGATGGCGACTGGCGTCCAGGCCGCGGTGGGCCCGGTGACCC GCTGACCAGGACAGATGTAC
Downstream 100 bases:
>100_bases CCTGGCCGAGGTGGCCTCGATTTTCGCCGCGTTTCCCGCTCCATGGTGGATCGCCGGCGGATACGCGATCGAACTCGCTG TGGGTAACCAGTTCCGGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MAMAVVRPLIQMGCGSRYSAAAGRRIGGIMHGNEFATMEWIWDQGSIRINLPGGREMMVAGSYNEVVAELGKLGGQGWDV ASSTASSNWIFWTLRRASYAHDRALGTR
Sequences:
>Translated_108_residues MAMAVVRPLIQMGCGSRYSAAAGRRIGGIMHGNEFATMEWIWDQGSIRINLPGGREMMVAGSYNEVVAELGKLGGQGWDV ASSTASSNWIFWTLRRASYAHDRALGTR >Mature_107_residues AMAVVRPLIQMGCGSRYSAAAGRRIGGIMHGNEFATMEWIWDQGSIRINLPGGREMMVAGSYNEVVAELGKLGGQGWDVA SSTASSNWIFWTLRRASYAHDRALGTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11779; Mature: 11647
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMAVVRPLIQMGCGSRYSAAAGRRIGGIMHGNEFATMEWIWDQGSIRINLPGGREMMVA CCHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCEEEEEEEECCCCEEEECCCCCEEEEE GSYNEVVAELGKLGGQGWDVASSTASSNWIFWTLRRASYAHDRALGTR CCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCC >Mature Secondary Structure AMAVVRPLIQMGCGSRYSAAAGRRIGGIMHGNEFATMEWIWDQGSIRINLPGGREMMVA CHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCEEEEEEEECCCCEEEECCCCCEEEEE GSYNEVVAELGKLGGQGWDVASSTASSNWIFWTLRRASYAHDRALGTR CCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA