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The map label for this gene is scoP [H]

Identifier: 158317381

GI number: 158317381

Start: 6847286

End: 6848176

Strand: Direct

Name: scoP [H]

Synonym: Franean1_5632

Alternate gene names: 158317381

Gene position: 6847286-6848176 (Clockwise)

Preceding gene: 158317380

Following gene: 158317382

Centisome position: 76.23

GC content: 70.37

Gene sequence:

>891_bases
GTGTCCGTGACCAGGAATCCATCCACCATCAGTTACCTTTCCACTACCCGTCGCGGGCGGACGTCGTCCGCGCTGCTGAT
CGGGATCACCGTCGCGGTCAGCGCGACACTCGGCGCTTGCTCCAACGGCGGCGACGGAACCGGGGTGACGATCGTCGACG
CCGGCGGAACCGACGGGGGACTACACGGCGTTGTCCCAACCGAACGCTTCGCGAAGCCGGCGCTCAACCTGACCGATACC
GACGGGCGCCCGTTCGATCTTCGCGCCCGAACGCAAGGGAAGATCACTCTGCTTTTCTTCGGCTACACGATGTGCCCGGA
CGTCTGCCCGACCACCATGGCCGACATCGCCGCGGCCCTGGACGAGGTCGACCGGTCGGTGCGGGACCAGGTCTCGGTGG
TGTTCGTCAGCACCGACCCGGACCGTGACACCGCTCCCGTCCTCGACCGCTGGCTCCGCCAGTTCGACTCGACCTTCATC
GGCGTACGCGGGCCGTTCAAGGACGCGCAGGCCCAGGCCGAGGCGATCGGCGTCCCGCTGGAGGCACCGAAGGTCCAGGC
GGACGGATCCGTCCTGGTCACCCATGGCAGCCAGGTCATCGCCTTCGGCCGGGACGCCCGCGCCCGCGTGCTCTACCTGG
CCGGCACCCCGGTGGCCGACTACATCGCGGACCTTCCCGTCCTCACGGCCGAGACCCTCGGAACCGACCCGCGCGACGGG
ACCGCGACCGCGACGCCCAGGGCCACCAGCGCGACCAGGGTCACCGCGATGCCGAGGGTGACCGCGGCACCAGGGGCGAC
CGGGTCGCCTGGGACAGCAGGGACAGCAGGGACGACGAACGCCGTCCAGACAACCGGCGACAGCCGGCCGGCCCGGATCG
CCGCAGGATGA

Upstream 100 bases:

>100_bases
CGCCGTGCGCGCTGCCCGGCACGCGGTGCCCCGCGCGCTGACCACGCCAGCCCGGCGGCGCGGTGTGTGTCGGTATCGCC
CAGATCTCCGCAGGAATCAG

Downstream 100 bases:

>100_bases
CCGGGACCACAGCCGCCGGGGGGGCCACCGGGTCCGTTGCTTCCGGAGACGCAGGGGACGCCGGGACACCGCGCACGCGT
CGGTTCGCCCGCCTGGCCAG

Product: electron transport protein SCO1/SenC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MSVTRNPSTISYLSTTRRGRTSSALLIGITVAVSATLGACSNGGDGTGVTIVDAGGTDGGLHGVVPTERFAKPALNLTDT
DGRPFDLRARTQGKITLLFFGYTMCPDVCPTTMADIAAALDEVDRSVRDQVSVVFVSTDPDRDTAPVLDRWLRQFDSTFI
GVRGPFKDAQAQAEAIGVPLEAPKVQADGSVLVTHGSQVIAFGRDARARVLYLAGTPVADYIADLPVLTAETLGTDPRDG
TATATPRATSATRVTAMPRVTAAPGATGSPGTAGTAGTTNAVQTTGDSRPARIAAG

Sequences:

>Translated_296_residues
MSVTRNPSTISYLSTTRRGRTSSALLIGITVAVSATLGACSNGGDGTGVTIVDAGGTDGGLHGVVPTERFAKPALNLTDT
DGRPFDLRARTQGKITLLFFGYTMCPDVCPTTMADIAAALDEVDRSVRDQVSVVFVSTDPDRDTAPVLDRWLRQFDSTFI
GVRGPFKDAQAQAEAIGVPLEAPKVQADGSVLVTHGSQVIAFGRDARARVLYLAGTPVADYIADLPVLTAETLGTDPRDG
TATATPRATSATRVTAMPRVTAAPGATGSPGTAGTAGTTNAVQTTGDSRPARIAAG
>Mature_295_residues
SVTRNPSTISYLSTTRRGRTSSALLIGITVAVSATLGACSNGGDGTGVTIVDAGGTDGGLHGVVPTERFAKPALNLTDTD
GRPFDLRARTQGKITLLFFGYTMCPDVCPTTMADIAAALDEVDRSVRDQVSVVFVSTDPDRDTAPVLDRWLRQFDSTFIG
VRGPFKDAQAQAEAIGVPLEAPKVQADGSVLVTHGSQVIAFGRDARARVLYLAGTPVADYIADLPVLTAETLGTDPRDGT
ATATPRATSATRVTAMPRVTAAPGATGSPGTAGTAGTTNAVQTTGDSRPARIAAG

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SCO1/2 family [H]

Homologues:

Organism=Homo sapiens, GI4759068, Length=114, Percent_Identity=28.0701754385965, Blast_Score=65, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6319498, Length=122, Percent_Identity=31.9672131147541, Blast_Score=84, Evalue=4e-17,
Organism=Drosophila melanogaster, GI19920710, Length=104, Percent_Identity=31.7307692307692, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003782
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF02630 SCO1-SenC [H]

EC number: NA

Molecular weight: Translated: 30450; Mature: 30319

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVTRNPSTISYLSTTRRGRTSSALLIGITVAVSATLGACSNGGDGTGVTIVDAGGTDGG
CCCCCCCCEEEHHHHHCCCCCCCEEEEEEEEEHHHHHCCCCCCCCCCCEEEEECCCCCCC
LHGVVPTERFAKPALNLTDTDGRPFDLRARTQGKITLLFFGYTMCPDVCPTTMADIAAAL
CCCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEEECCHHCCCCCHHHHHHHHHHH
DEVDRSVRDQVSVVFVSTDPDRDTAPVLDRWLRQFDSTFIGVRGPFKDAQAQAEAIGVPL
HHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHCCCC
EAPKVQADGSVLVTHGSQVIAFGRDARARVLYLAGTPVADYIADLPVLTAETLGTDPRDG
CCCCEECCCCEEEEECCEEEEECCCCCEEEEEEECCCHHHHHHCCCCEEHHHCCCCCCCC
TATATPRATSATRVTAMPRVTAAPGATGSPGTAGTAGTTNAVQTTGDSRPARIAAG
CCCCCCCCCCCEEEEECCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCEECCC
>Mature Secondary Structure 
SVTRNPSTISYLSTTRRGRTSSALLIGITVAVSATLGACSNGGDGTGVTIVDAGGTDGG
CCCCCCCEEEHHHHHCCCCCCCEEEEEEEEEHHHHHCCCCCCCCCCCEEEEECCCCCCC
LHGVVPTERFAKPALNLTDTDGRPFDLRARTQGKITLLFFGYTMCPDVCPTTMADIAAAL
CCCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEEECCHHCCCCCHHHHHHHHHHH
DEVDRSVRDQVSVVFVSTDPDRDTAPVLDRWLRQFDSTFIGVRGPFKDAQAQAEAIGVPL
HHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHCCCC
EAPKVQADGSVLVTHGSQVIAFGRDARARVLYLAGTPVADYIADLPVLTAETLGTDPRDG
CCCCEECCCCEEEEECCEEEEECCCCCEEEEEEECCCHHHHHHCCCCEEHHHCCCCCCCC
TATATPRATSATRVTAMPRVTAAPGATGSPGTAGTAGTTNAVQTTGDSRPARIAAG
CCCCCCCCCCCEEEEECCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8226670 [H]