Click here to switch to the map view.

The map label for this gene is yhjB [C]

Identifier: 158317365

GI number: 158317365

Start: 6827353

End: 6828396

Strand: Reverse

Name: yhjB [C]

Synonym: Franean1_5616

Alternate gene names: 158317365

Gene position: 6828396-6827353 (Counterclockwise)

Preceding gene: 158317367

Following gene: 158317364

Centisome position: 76.02

GC content: 75.0

Gene sequence:

>1044_bases
GTGACTGACCGAATGCTCAGCAATCCCGATGGTAGCCCCAGCGGCCATCCGGCCACCGGCCGGCTCGCCGTGACGATGGA
CACATCGGCGGGGGTTTCTCGGCCGCCCGGCGTGGCGGCCCCGCACCGGGCACCCACGATGCGGCACGCGCCGATCTCGG
CGACGTCCGCGGTGGGCCACCCGGGCGCCCGTACCCGTCCCGGCGCGGTGGCGGCGGGTCTGCCCGGCCGCGCCCCGGTC
GCGGCCCGCGGGCCGCAGGTGCCGCGGGATCTGGCGCTCGGCGCGGCGGAGCTGCGCGGCGTGCTCCGTGTCGTCGAGGA
CTGCGAACGAGCGGCGTCGCTGCCGGCGTTCCGCGAGGCGGCGCTCGACGGGATGGCCCGCCATCTCGGCTACCGCCACT
CGGCGTTCTTCCTCGGCTCGTCCCCGCAGGCGACCTTCCAGGACGCCCGCCCGACTGGTCGCGGTCTCGCGCTGCGCATG
GCCGGGCCCTTCCTGGAGCGGTACCGCAGCCTCGAGGTCTTCAACGACCCGGAGAGCCTGCGGCTGATGTGGGAGCGCGG
CCTGGTCACGCTCGACGAGATCGGGGTGCCCGACCGGCCCGAAGTCCGGCTGCGGTTGGAGCGCTTCCTGCGCGCCCACG
GGATCCACGCGAAGCTGCTGATCAGGCTCGCCGGGGGAAGCGGTGTCGGTGCGGTCGTCTCCCTGCTGGACCCGCGGCCC
GGTGCCTTCGGGCCGCGTGACCGCGCCGTGGGCGCCGTGCTCGCCCGCCACCTCGGCAACCTGCTGCGCTTCTACATCCG
GGTGAACCCGGGCCCGGCCGTGACGGCGAAGCTTTCCGCCCGTGAGCGCGACGTCGTCCGCCTGGTGGCGGAGGGCCAGT
CGAACCGGCAGGTGGCGGAGGCCCTCTGCATCAGCATCGACACGGTCAAGCACCACCTGACGCACGCGCTCGTGGCGACC
GGCTGCTCCAACCGCACCCAGCTCGCGCTCGCCTGGCAGCGTGAGATGGGCTCGATGCCGGCGCCGGGCCTGCCCCGCCC
GTAG

Upstream 100 bases:

>100_bases
CCCTAGGCTTGCCGAACATGTCCAGCTTGGCCGGAAATACGCCGGCTGATTCGCGACTACCGGCCAGTGACCTGGTGTCG
GTCTGCCCCCGGAGGCATGT

Downstream 100 bases:

>100_bases
CCGGTGCCGTCGTATCCCGGCCAGCCGTGGTCGGGGCGCTCGCGGGTCCGCGGACCGGCGGCGCACGAGCGGGCGGCGCG
GGGTGCCCACCCGGTGCCGA

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator LuxR Family; Luxr Family Transcriptional Regulator

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MTDRMLSNPDGSPSGHPATGRLAVTMDTSAGVSRPPGVAAPHRAPTMRHAPISATSAVGHPGARTRPGAVAAGLPGRAPV
AARGPQVPRDLALGAAELRGVLRVVEDCERAASLPAFREAALDGMARHLGYRHSAFFLGSSPQATFQDARPTGRGLALRM
AGPFLERYRSLEVFNDPESLRLMWERGLVTLDEIGVPDRPEVRLRLERFLRAHGIHAKLLIRLAGGSGVGAVVSLLDPRP
GAFGPRDRAVGAVLARHLGNLLRFYIRVNPGPAVTAKLSARERDVVRLVAEGQSNRQVAEALCISIDTVKHHLTHALVAT
GCSNRTQLALAWQREMGSMPAPGLPRP

Sequences:

>Translated_347_residues
MTDRMLSNPDGSPSGHPATGRLAVTMDTSAGVSRPPGVAAPHRAPTMRHAPISATSAVGHPGARTRPGAVAAGLPGRAPV
AARGPQVPRDLALGAAELRGVLRVVEDCERAASLPAFREAALDGMARHLGYRHSAFFLGSSPQATFQDARPTGRGLALRM
AGPFLERYRSLEVFNDPESLRLMWERGLVTLDEIGVPDRPEVRLRLERFLRAHGIHAKLLIRLAGGSGVGAVVSLLDPRP
GAFGPRDRAVGAVLARHLGNLLRFYIRVNPGPAVTAKLSARERDVVRLVAEGQSNRQVAEALCISIDTVKHHLTHALVAT
GCSNRTQLALAWQREMGSMPAPGLPRP
>Mature_346_residues
TDRMLSNPDGSPSGHPATGRLAVTMDTSAGVSRPPGVAAPHRAPTMRHAPISATSAVGHPGARTRPGAVAAGLPGRAPVA
ARGPQVPRDLALGAAELRGVLRVVEDCERAASLPAFREAALDGMARHLGYRHSAFFLGSSPQATFQDARPTGRGLALRMA
GPFLERYRSLEVFNDPESLRLMWERGLVTLDEIGVPDRPEVRLRLERFLRAHGIHAKLLIRLAGGSGVGAVVSLLDPRPG
AFGPRDRAVGAVLARHLGNLLRFYIRVNPGPAVTAKLSARERDVVRLVAEGQSNRQVAEALCISIDTVKHHLTHALVATG
CSNRTQLALAWQREMGSMPAPGLPRP

Specific function: Unknown

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36948; Mature: 36817

Theoretical pI: Translated: 11.75; Mature: 11.75

Prosite motif: PS50043 HTH_LUXR_2 ; PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDRMLSNPDGSPSGHPATGRLAVTMDTSAGVSRPPGVAAPHRAPTMRHAPISATSAVGH
CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCC
PGARTRPGAVAAGLPGRAPVAARGPQVPRDLALGAAELRGVLRVVEDCERAASLPAFREA
CCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHH
ALDGMARHLGYRHSAFFLGSSPQATFQDARPTGRGLALRMAGPFLERYRSLEVFNDPESL
HHHHHHHHHCCCCCEEEECCCCCCHHHCCCCCCCCEEEEECCHHHHHHHCCCCCCCCHHH
RLMWERGLVTLDEIGVPDRPEVRLRLERFLRAHGIHAKLLIRLAGGSGVGAVVSLLDPRP
HHHHHCCCEEHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCC
GAFGPRDRAVGAVLARHLGNLLRFYIRVNPGPAVTAKLSARERDVVRLVAEGQSNRQVAE
CCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEECCCHHHHHHHHHHCCCCHHHHHH
ALCISIDTVKHHLTHALVATGCSNRTQLALAWQREMGSMPAPGLPRP
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TDRMLSNPDGSPSGHPATGRLAVTMDTSAGVSRPPGVAAPHRAPTMRHAPISATSAVGH
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCC
PGARTRPGAVAAGLPGRAPVAARGPQVPRDLALGAAELRGVLRVVEDCERAASLPAFREA
CCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHH
ALDGMARHLGYRHSAFFLGSSPQATFQDARPTGRGLALRMAGPFLERYRSLEVFNDPESL
HHHHHHHHHCCCCCEEEECCCCCCHHHCCCCCCCCEEEEECCHHHHHHHCCCCCCCCHHH
RLMWERGLVTLDEIGVPDRPEVRLRLERFLRAHGIHAKLLIRLAGGSGVGAVVSLLDPRP
HHHHHCCCEEHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCC
GAFGPRDRAVGAVLARHLGNLLRFYIRVNPGPAVTAKLSARERDVVRLVAEGQSNRQVAE
CCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEECCCHHHHHHHHHHCCCCHHHHHH
ALCISIDTVKHHLTHALVATGCSNRTQLALAWQREMGSMPAPGLPRP
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA