| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is yojK [H]
Identifier: 158317360
GI number: 158317360
Start: 6808950
End: 6810140
Strand: Reverse
Name: yojK [H]
Synonym: Franean1_5611
Alternate gene names: 158317360
Gene position: 6810140-6808950 (Counterclockwise)
Preceding gene: 158317361
Following gene: 158317359
Centisome position: 75.82
GC content: 73.97
Gene sequence:
>1191_bases ATGGGCCGTGTTCTCTTCGCCGTGCCGCCGCTGACCGGGCACGTGAACCCGGCGGTGGGCATCGCCGGCGAGCTGGCGGC CCGCGGGCAGGAGGTGGCCCTGGTCGGCCACGCGAGCGTCGTCGGGCCGCTCGTCCCGCCGTCCGTCCCGCTCATCGCGC TGCCAGGGGAGATATCGGCCGACCAGCGGGCCGAGCTGGAGGCACGGTCCCGGCCGCTGCGCGGGCCCGCGTCACTGAAG TTCCTGTGGGACGAGTTCCTGCTGCCGCTGGGCGCCTCGATGGCGCGGGACGTCGGTGCCGTCGTCGAACGGTGGCGCCC GGATGTGATCGTCGCCGACCAGCAGGCGGTCGGGGTCGCCATGGTCGCCCGTCGGCGCGGCATCCGGTGGGCCACGCTCG CCACCACGTCGGCGGAGCTCGACGACCCCTACGCCGTGCTCGCCGGGGTCGGGAACTGGGTGTCGGAGCGGCTGCGGGAC TTCCAGGTCGCGAACGGCGTCCCGGCGGAGGAGGCGGCGCGCGGTGACCTGCGCTTCTCTGAGGACCTCACTGTGGTCTG CTCGGTGCCCTCGTTGCTGCGTACTGCCAGTCATCCGTCCCATCACGTGTTCGTCGGCTGCGCCGCCGGACTGCGCCGGT CGGCCCCGGAGTTCCCCTGGGAGTGGCTCGACCGGGACCGCCGCACCGTGCTCGTCTCGCTCGGCACGGTGACCCGGGAG GCCGGCGGGCGTTTCCTGCGCGCGGCCGCGGAGGCGCTGGTGGGGATGTCCGACCGGGTGCAGGCCGTGATCGTCGCGCC TCCCGGCCCGCTGGACGACCTCGCCGGCCAGGTTCCCGACGACCTGCTGGTCCGTCCGTTCGTGCCGCAGGTGGACCTGA TGGCCGGACTGGACGCGATAGTGTGCCACGCGGGCAACAACACGGTGTGTGAGGCTTTGTCGCGGGGAGTGCCGCTGGTG GTCGCGCCGGTTCGTGACGACCAGCCGATCATCGGCGAGCAGGTGGTGCGGGCCGGTGCCGGTGTGCGGGTGCGCTTCGG GCGCTCGACCCCGGTGACGCTGGCCACCGCGATCGGCACCGTGCTCGACGAGCCGTCCCACCGGGTCGCGGCGCGGCGGC TGCAGGGCGAGTTCAGCGCGGCGGGCGGTGTCGTGGCCGCCGCCGACCACATTGAGAAGCTGCTGCCGTAG
Upstream 100 bases:
>100_bases CCGGTTCGCCGGCCGAGGCCTGATCGTCACCGGTGCGGCTCGCGAAGGGTGCGGCTGACTCACCGCCGGAAGGGAGACGA ATGGAATTTCGGGGGCTTTG
Downstream 100 bases:
>100_bases GCCCGGCCCCGGCGGCCCGCCCGTCCGCGGGCGCGCTGACGGGGCCGGGCCTGGGGCTGGGGCTGGGGCTGTTCGACCGG CGGGGGCGTGAGAGTCGTGC
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MGRVLFAVPPLTGHVNPAVGIAGELAARGQEVALVGHASVVGPLVPPSVPLIALPGEISADQRAELEARSRPLRGPASLK FLWDEFLLPLGASMARDVGAVVERWRPDVIVADQQAVGVAMVARRRGIRWATLATTSAELDDPYAVLAGVGNWVSERLRD FQVANGVPAEEAARGDLRFSEDLTVVCSVPSLLRTASHPSHHVFVGCAAGLRRSAPEFPWEWLDRDRRTVLVSLGTVTRE AGGRFLRAAAEALVGMSDRVQAVIVAPPGPLDDLAGQVPDDLLVRPFVPQVDLMAGLDAIVCHAGNNTVCEALSRGVPLV VAPVRDDQPIIGEQVVRAGAGVRVRFGRSTPVTLATAIGTVLDEPSHRVAARRLQGEFSAAGGVVAAADHIEKLLP
Sequences:
>Translated_396_residues MGRVLFAVPPLTGHVNPAVGIAGELAARGQEVALVGHASVVGPLVPPSVPLIALPGEISADQRAELEARSRPLRGPASLK FLWDEFLLPLGASMARDVGAVVERWRPDVIVADQQAVGVAMVARRRGIRWATLATTSAELDDPYAVLAGVGNWVSERLRD FQVANGVPAEEAARGDLRFSEDLTVVCSVPSLLRTASHPSHHVFVGCAAGLRRSAPEFPWEWLDRDRRTVLVSLGTVTRE AGGRFLRAAAEALVGMSDRVQAVIVAPPGPLDDLAGQVPDDLLVRPFVPQVDLMAGLDAIVCHAGNNTVCEALSRGVPLV VAPVRDDQPIIGEQVVRAGAGVRVRFGRSTPVTLATAIGTVLDEPSHRVAARRLQGEFSAAGGVVAAADHIEKLLP >Mature_395_residues GRVLFAVPPLTGHVNPAVGIAGELAARGQEVALVGHASVVGPLVPPSVPLIALPGEISADQRAELEARSRPLRGPASLKF LWDEFLLPLGASMARDVGAVVERWRPDVIVADQQAVGVAMVARRRGIRWATLATTSAELDDPYAVLAGVGNWVSERLRDF QVANGVPAEEAARGDLRFSEDLTVVCSVPSLLRTASHPSHHVFVGCAAGLRRSAPEFPWEWLDRDRRTVLVSLGTVTREA GGRFLRAAAEALVGMSDRVQAVIVAPPGPLDDLAGQVPDDLLVRPFVPQVDLMAGLDAIVCHAGNNTVCEALSRGVPLVV APVRDDQPIIGEQVVRAGAGVRVRFGRSTPVTLATAIGTVLDEPSHRVAARRLQGEFSAAGGVVAAADHIEKLLP
Specific function: Unknown
COG id: COG1819
COG function: function code GC; Glycosyl transferases, related to UDP-glucuronosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-glycosyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002213 - InterPro: IPR006326 [H]
Pfam domain/function: PF00201 UDPGT [H]
EC number: NA
Molecular weight: Translated: 41799; Mature: 41668
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRVLFAVPPLTGHVNPAVGIAGELAARGQEVALVGHASVVGPLVPPSVPLIALPGEISA CCCEEEEECCCCCCCCCCCCCHHHHHCCCCEEEEEECCHHHCCCCCCCCCEEEECCCCCC DQRAELEARSRPLRGPASLKFLWDEFLLPLGASMARDVGAVVERWRPDVIVADQQAVGVA CHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEECCHHHHHH MVARRRGIRWATLATTSAELDDPYAVLAGVGNWVSERLRDFQVANGVPAEEAARGDLRFS HHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEC EDLTVVCSVPSLLRTASHPSHHVFVGCAAGLRRSAPEFPWEWLDRDRRTVLVSLGTVTRE CCCEEEECCHHHHHHCCCCCCEEEEEEHHHHHCCCCCCCHHHHCCCCEEEEEEECHHHHH AGGRFLRAAAEALVGMSDRVQAVIVAPPGPLDDLAGQVPDDLLVRPFVPQVDLMAGLDAI HCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHCCCCHHHCCCCCCCCHHHHHCCCEE VCHAGNNTVCEALSRGVPLVVAPVRDDQPIIGEQVVRAGAGVRVRFGRSTPVTLATAIGT EEECCCCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHH VLDEPSHRVAARRLQGEFSAAGGVVAAADHIEKLLP HHCCCHHHHHHHHHCCCHHHCCCEEHHHHHHHHHCC >Mature Secondary Structure GRVLFAVPPLTGHVNPAVGIAGELAARGQEVALVGHASVVGPLVPPSVPLIALPGEISA CCEEEEECCCCCCCCCCCCCHHHHHCCCCEEEEEECCHHHCCCCCCCCCEEEECCCCCC DQRAELEARSRPLRGPASLKFLWDEFLLPLGASMARDVGAVVERWRPDVIVADQQAVGVA CHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEECCHHHHHH MVARRRGIRWATLATTSAELDDPYAVLAGVGNWVSERLRDFQVANGVPAEEAARGDLRFS HHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEC EDLTVVCSVPSLLRTASHPSHHVFVGCAAGLRRSAPEFPWEWLDRDRRTVLVSLGTVTRE CCCEEEECCHHHHHHCCCCCCEEEEEEHHHHHCCCCCCCHHHHCCCCEEEEEEECHHHHH AGGRFLRAAAEALVGMSDRVQAVIVAPPGPLDDLAGQVPDDLLVRPFVPQVDLMAGLDAI HCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHCCCCHHHCCCCCCCCHHHHHCCCEE VCHAGNNTVCEALSRGVPLVVAPVRDDQPIIGEQVVRAGAGVRVRFGRSTPVTLATAIGT EEECCCCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHH VLDEPSHRVAARRLQGEFSAAGGVVAAADHIEKLLP HHCCCHHHHHHHHHCCCHHHCCCEEHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]