| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317346
Identifier: 158317346
GI number: 158317346
Start: 6787483
End: 6788802
Strand: Reverse
Name: 158317346
Synonym: Franean1_5596
Alternate gene names: NA
Gene position: 6788802-6787483 (Counterclockwise)
Preceding gene: 158317347
Following gene: 158317345
Centisome position: 75.58
GC content: 73.18
Gene sequence:
>1320_bases ATGCCCCCCGGGGGATCCGGCGGGGGCGAGGGCGGCACCAGGCCGACCCAGGACGTGCGGCGCCGCTCCCGGCCAGGAGC CCCGGCGGCCCCGCCGCCACCCGCGGACGCGTTCCGCCCGTCCGGTCCGCCACCACCCGCGGACGCGTTCCGCCCCGGCC GTCCGGTGCGCCCTGCCGACGAGCAGCCGGAGCACGATCACGTGCCCCCGATGACGGAGCCCACGCTCGGCGCGGCCATC GACGCGGTCCGGCACGGTGCCGGGGCCCCTGGCGCGGCGCCCGCTCCGACGGCGCCCGTCGGGCCGGGTGACCTGTGGAC GGGGCCGGCCTCCGGTCAGTCCCCGCGGCCCGGCGCGACCGGCCCCCAGTACGGCCAGCCTGGTCAGGCCGCGGGCACCT ACACCGACAGTGGCGGCCATGTCCGCCCGGTGCCCGGGAACGGTGGCTACGGGGAGGCCTACCTGGCCGCGTCCGACAGC GGGGGTCTGCCGGGCGGCCCCGGTGGTCCGCCGGGTGGCTCGGGCCCGGCGCCGGGCCCGGCGCCCGCTCGGCGGCGGCG CCGCGGGCGCATCCTCGCGATCGTTGTTGTGGTCCTCCTTGTGCTCTTCGTGGTGGGCGACCGGGTGGCGGTCGCGATCG CCAAGGACCAGATGGTCAAGCAGATCGAGGTCAGCGTCGCGGAGAGCCTGGAGCCCGGCGCGACTCCGCCGACGGTGAAG AACGTCACCATCGGCGGCTTCCCGTTCCTCACCCAGGTGCTGTTCGGAAAGTTCAAGGACATCGGCGTCACGATCGAGGG AATACCAACCCCCGGCCCGCGTATCTCGCAGGTCCACGCGAATCTCAAAGGCCTTCACGTACCGCTCGGCGACGCACTCT CCGACAACGTCGGCGAGGTGCCGGTGGACGACGTCCGGGCGACGGTTCGGATCAGCTATGACGACCTGAACACCTACCTC GCGAAGCAGGATCCGCCGGTTCAGGTCAACCCGGTGGACGGCGGTGACCGGGTCGAGATCTCCAGCCGGATCGACACCGG GATTCTCGGATCGCAGGAGATCGGTGGCGTGACCACCTTCGAGGTTCAGGACAACGCGCTCACCCTCGTGCCGTCGGAGC TGTCGCTGAAGGGCCCGATCAACGCCAACATCCCGCTCCCCGCGGGTCTTCGGCTCGACTCGATCCCCATCCCGATCGCC GGACTGCCGTTCGACCTCAACATCGTCGCGGCGTCGACGGACGCCTCGGGCCTCTCGCTCACCGCGACGGCCAAGGACGT CATCCTGCCGGCCGCCCCTCAGCCGGCTGGCGGGCAGTGA
Upstream 100 bases:
>100_bases CGCCACGCCGGAGGCCCCGACGTGGCGCGGAGCGGGAGATGTTCCGGTGAACCACGGGCGCGGCGGGGACGGGCAGGAGC CCGCGGACGCCACCAATGTC
Downstream 100 bases:
>100_bases TCCACAAGATCGGGATAATTCGGGCGGATCGCCGCGTCGAGGGCTGGTCAGAGGCCCCGGCGCGGGGTCGTGGCCGCCCG GCGGCGCCCGGCGCCGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 439; Mature: 438
Protein sequence:
>439_residues MPPGGSGGGEGGTRPTQDVRRRSRPGAPAAPPPPADAFRPSGPPPPADAFRPGRPVRPADEQPEHDHVPPMTEPTLGAAI DAVRHGAGAPGAAPAPTAPVGPGDLWTGPASGQSPRPGATGPQYGQPGQAAGTYTDSGGHVRPVPGNGGYGEAYLAASDS GGLPGGPGGPPGGSGPAPGPAPARRRRRGRILAIVVVVLLVLFVVGDRVAVAIAKDQMVKQIEVSVAESLEPGATPPTVK NVTIGGFPFLTQVLFGKFKDIGVTIEGIPTPGPRISQVHANLKGLHVPLGDALSDNVGEVPVDDVRATVRISYDDLNTYL AKQDPPVQVNPVDGGDRVEISSRIDTGILGSQEIGGVTTFEVQDNALTLVPSELSLKGPINANIPLPAGLRLDSIPIPIA GLPFDLNIVAASTDASGLSLTATAKDVILPAAPQPAGGQ
Sequences:
>Translated_439_residues MPPGGSGGGEGGTRPTQDVRRRSRPGAPAAPPPPADAFRPSGPPPPADAFRPGRPVRPADEQPEHDHVPPMTEPTLGAAI DAVRHGAGAPGAAPAPTAPVGPGDLWTGPASGQSPRPGATGPQYGQPGQAAGTYTDSGGHVRPVPGNGGYGEAYLAASDS GGLPGGPGGPPGGSGPAPGPAPARRRRRGRILAIVVVVLLVLFVVGDRVAVAIAKDQMVKQIEVSVAESLEPGATPPTVK NVTIGGFPFLTQVLFGKFKDIGVTIEGIPTPGPRISQVHANLKGLHVPLGDALSDNVGEVPVDDVRATVRISYDDLNTYL AKQDPPVQVNPVDGGDRVEISSRIDTGILGSQEIGGVTTFEVQDNALTLVPSELSLKGPINANIPLPAGLRLDSIPIPIA GLPFDLNIVAASTDASGLSLTATAKDVILPAAPQPAGGQ >Mature_438_residues PPGGSGGGEGGTRPTQDVRRRSRPGAPAAPPPPADAFRPSGPPPPADAFRPGRPVRPADEQPEHDHVPPMTEPTLGAAID AVRHGAGAPGAAPAPTAPVGPGDLWTGPASGQSPRPGATGPQYGQPGQAAGTYTDSGGHVRPVPGNGGYGEAYLAASDSG GLPGGPGGPPGGSGPAPGPAPARRRRRGRILAIVVVVLLVLFVVGDRVAVAIAKDQMVKQIEVSVAESLEPGATPPTVKN VTIGGFPFLTQVLFGKFKDIGVTIEGIPTPGPRISQVHANLKGLHVPLGDALSDNVGEVPVDDVRATVRISYDDLNTYLA KQDPPVQVNPVDGGDRVEISSRIDTGILGSQEIGGVTTFEVQDNALTLVPSELSLKGPINANIPLPAGLRLDSIPIPIAG LPFDLNIVAASTDASGLSLTATAKDVILPAAPQPAGGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44264; Mature: 44133
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPGGSGGGEGGTRPTQDVRRRSRPGAPAAPPPPADAFRPSGPPPPADAFRPGRPVRPAD CCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EQPEHDHVPPMTEPTLGAAIDAVRHGAGAPGAAPAPTAPVGPGDLWTGPASGQSPRPGAT CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GPQYGQPGQAAGTYTDSGGHVRPVPGNGGYGEAYLAASDSGGLPGGPGGPPGGSGPAPGP CCCCCCCCCCCCCEECCCCEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC APARRRRRGRILAIVVVVLLVLFVVGDRVAVAIAKDQMVKQIEVSVAESLEPGATPPTVK CHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCC NVTIGGFPFLTQVLFGKFKDIGVTIEGIPTPGPRISQVHANLKGLHVPLGDALSDNVGEV EEEECCHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHCCCCEEEECCCHHHCCCCCCC PVDDVRATVRISYDDLNTYLAKQDPPVQVNPVDGGDRVEISSRIDTGILGSQEIGGVTTF CHHHCEEEEEEEHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCCCCCCCHHCCCEEEE EVQDNALTLVPSELSLKGPINANIPLPAGLRLDSIPIPIAGLPFDLNIVAASTDASGLSL EECCCEEEEECCCCEECCCCCCCCCCCCCCEECCCCCCEECCCEEEEEEEECCCCCCEEE TATAKDVILPAAPQPAGGQ EECCCCEEEECCCCCCCCC >Mature Secondary Structure PPGGSGGGEGGTRPTQDVRRRSRPGAPAAPPPPADAFRPSGPPPPADAFRPGRPVRPAD CCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EQPEHDHVPPMTEPTLGAAIDAVRHGAGAPGAAPAPTAPVGPGDLWTGPASGQSPRPGAT CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GPQYGQPGQAAGTYTDSGGHVRPVPGNGGYGEAYLAASDSGGLPGGPGGPPGGSGPAPGP CCCCCCCCCCCCCEECCCCEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC APARRRRRGRILAIVVVVLLVLFVVGDRVAVAIAKDQMVKQIEVSVAESLEPGATPPTVK CHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCC NVTIGGFPFLTQVLFGKFKDIGVTIEGIPTPGPRISQVHANLKGLHVPLGDALSDNVGEV EEEECCHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHCCCCEEEECCCHHHCCCCCCC PVDDVRATVRISYDDLNTYLAKQDPPVQVNPVDGGDRVEISSRIDTGILGSQEIGGVTTF CHHHCEEEEEEEHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCCCCCCCHHCCCEEEE EVQDNALTLVPSELSLKGPINANIPLPAGLRLDSIPIPIAGLPFDLNIVAASTDASGLSL EECCCEEEEECCCCEECCCCCCCCCCCCCCEECCCCCCEECCCEEEEEEEECCCCCCEEE TATAKDVILPAAPQPAGGQ EECCCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA