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The map label for this gene is yxjL [H]

Identifier: 158317264

GI number: 158317264

Start: 6678526

End: 6679278

Strand: Reverse

Name: yxjL [H]

Synonym: Franean1_5512

Alternate gene names: 158317264

Gene position: 6679278-6678526 (Counterclockwise)

Preceding gene: 158317266

Following gene: 158317260

Centisome position: 74.36

GC content: 67.33

Gene sequence:

>753_bases
ATGGCGCAAAAACCGAACCCGATTTCCGGATGTGTGATGACGGCCAGTGTGGTGCCGCCGTCGGCCGCTGATGCCGACCC
GACCCGTGACGTGATGCCGATACGGGTTCTCGTCGTGGACGATCACGAGCTCTTCCTCCAGGGCCTGCAGACCGTACTGG
AGACCGAGGAGGACATTTCGGTGGTCGGGCGCGCGGCGGACGGGCAGGAGGCGCTGACCCTGGCGTCCGGCACGACGCCG
GACATCGTCCTGATGGACGTGCGGATGCCGGGCCGCGACGGCATCGCCGCCGCCGGCGCCATCAAGCGCGCGGTGCCGCG
CACGCGGATCGTGATGCTCACGGTTTCGGACGAGGAGTCCGATCTGTTCGAGGCGATCAAGGCGGGGGCCGTCGGCTACC
TGCTGAAGTCGATCCCGCCGCACGAGGTGGCCGACGCGGTGCGCGCCGTGCACAACGGCCAGAGCCTGATCAGCCCCTCG
ATGGCCTCGAAGCTCATGGTCGAGTTCGCGACGATGGCCCGTGGTGGGGAGGACCGCCCGCGCGCGCACGCGCCCCACCT
CACCGCCCGCGAGCTCGAGGTCCTCAAGCTGGTGGCCGAGGGCCGGGCGAACCGCGAGATCGCGCGGAAGCTCTTCATCA
GTGAGAACACCGTGAAGAACCACGTTCGCAATATTCTTGACAAGCTTCAGCTGCACTCCCGCATGGAGGCGGTGATGTAC
GCCGTCCGCCAGGGCCTGTTCGACATCGAATAA

Upstream 100 bases:

>100_bases
TCGGAGGTGACTTCAGCGCGCCTGCGACCTCATGTGTGTAGTGCATCACGTAGAGTGGGCAGGTGTCCGAACCGGTTTTC
GCCTGCGGTGGAGAAGCCGC

Downstream 100 bases:

>100_bases
GTGTCTCCGGTGTGCTCTGGGAGTGTGTTCGGTGTGAATAGTGTGGTGGGCGCCGTCGGAGCGGCCGGGAGCGGCGGTGT
TCGCCGGATGATCATCTGGT

Product: two component LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MAQKPNPISGCVMTASVVPPSAADADPTRDVMPIRVLVVDDHELFLQGLQTVLETEEDISVVGRAADGQEALTLASGTTP
DIVLMDVRMPGRDGIAAAGAIKRAVPRTRIVMLTVSDEESDLFEAIKAGAVGYLLKSIPPHEVADAVRAVHNGQSLISPS
MASKLMVEFATMARGGEDRPRAHAPHLTARELEVLKLVAEGRANREIARKLFISENTVKNHVRNILDKLQLHSRMEAVMY
AVRQGLFDIE

Sequences:

>Translated_250_residues
MAQKPNPISGCVMTASVVPPSAADADPTRDVMPIRVLVVDDHELFLQGLQTVLETEEDISVVGRAADGQEALTLASGTTP
DIVLMDVRMPGRDGIAAAGAIKRAVPRTRIVMLTVSDEESDLFEAIKAGAVGYLLKSIPPHEVADAVRAVHNGQSLISPS
MASKLMVEFATMARGGEDRPRAHAPHLTARELEVLKLVAEGRANREIARKLFISENTVKNHVRNILDKLQLHSRMEAVMY
AVRQGLFDIE
>Mature_249_residues
AQKPNPISGCVMTASVVPPSAADADPTRDVMPIRVLVVDDHELFLQGLQTVLETEEDISVVGRAADGQEALTLASGTTPD
IVLMDVRMPGRDGIAAAGAIKRAVPRTRIVMLTVSDEESDLFEAIKAGAVGYLLKSIPPHEVADAVRAVHNGQSLISPSM
ASKLMVEFATMARGGEDRPRAHAPHLTARELEVLKLVAEGRANREIARKLFISENTVKNHVRNILDKLQLHSRMEAVMYA
VRQGLFDIE

Specific function: Probable member of the two-component regulatory system yxjM/yxjL [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788521, Length=212, Percent_Identity=39.1509433962264, Blast_Score=134, Evalue=4e-33,
Organism=Escherichia coli, GI1788222, Length=219, Percent_Identity=35.1598173515982, Blast_Score=132, Evalue=3e-32,
Organism=Escherichia coli, GI1787473, Length=219, Percent_Identity=35.6164383561644, Blast_Score=117, Evalue=7e-28,
Organism=Escherichia coli, GI1786747, Length=212, Percent_Identity=26.4150943396226, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1790102, Length=203, Percent_Identity=31.5270935960591, Blast_Score=87, Evalue=7e-19,
Organism=Escherichia coli, GI1788712, Length=210, Percent_Identity=23.8095238095238, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1788546, Length=210, Percent_Identity=28.5714285714286, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR011990
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 27071; Mature: 26939

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQKPNPISGCVMTASVVPPSAADADPTRDVMPIRVLVVDDHELFLQGLQTVLETEEDIS
CCCCCCCCCHHEEEEECCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCHHHHH
VVGRAADGQEALTLASGTTPDIVLMDVRMPGRDGIAAAGAIKRAVPRTRIVMLTVSDEES
HHCCCCCCCHHEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCEEEEEEEECCCHH
DLFEAIKAGAVGYLLKSIPPHEVADAVRAVHNGQSLISPSMASKLMVEFATMARGGEDRP
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHCCCCCCC
RAHAPHLTARELEVLKLVAEGRANREIARKLFISENTVKNHVRNILDKLQLHSRMEAVMY
CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
AVRQGLFDIE
HHHHCCCCCC
>Mature Secondary Structure 
AQKPNPISGCVMTASVVPPSAADADPTRDVMPIRVLVVDDHELFLQGLQTVLETEEDIS
CCCCCCCCHHEEEEECCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCHHHHH
VVGRAADGQEALTLASGTTPDIVLMDVRMPGRDGIAAAGAIKRAVPRTRIVMLTVSDEES
HHCCCCCCCHHEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCEEEEEEEECCCHH
DLFEAIKAGAVGYLLKSIPPHEVADAVRAVHNGQSLISPSMASKLMVEFATMARGGEDRP
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHCCCCCCC
RAHAPHLTARELEVLKLVAEGRANREIARKLFISENTVKNHVRNILDKLQLHSRMEAVMY
CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
AVRQGLFDIE
HHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8978088; 8969509; 9384377 [H]