| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317257
Identifier: 158317257
GI number: 158317257
Start: 6668607
End: 6669428
Strand: Reverse
Name: 158317257
Synonym: Franean1_5504
Alternate gene names: NA
Gene position: 6669428-6668607 (Counterclockwise)
Preceding gene: 158317258
Following gene: 158317256
Centisome position: 74.25
GC content: 73.72
Gene sequence:
>822_bases GTGCTTCGTCATGTCCTCGCGACCCGCTATGCCACGCCCCTGCGGGAGGGCGGCAGTCTTCCCGGCGTCATGGAGGGCGA CGACCTCGGAACGTGGGTGGTGAAGTTCACCGGCGCCGGGCAGGGGCCCAAGGCGCTCGTCGCCGAGGTGATCGTCGGCG AGCTCGCGCGCGGCCTGGGCCTGGCCGTGCCCGAGCTGGTCCTCGTCGATGTCGACCCGGATCTCGGCCGAACGGAGCCC GACCAGGAGGTTCAGGACCTGCTCCGGGCGAGCCCCGGCCGCAACCTCGGCATGGACTACCTGCCCGGCTCGATCACCTA CGACCCGCTGGCGTTCCCGGTGGAGCCGGCGCTCGCCGCCCGGGTCGTCTGGCTCGACGCGTTCACGCTGAACGTCGACC GCTCCTGGCGGAATCCGAACCTGTTGGTGTGGGGCTCCCGCCTGTGGCTGATCGACCATGGGGCGGCCCTGTACCCGCAT CATGACTGGCCGGGCGCCGCGGCGGCGGTCGACCGGCCGCTGCCCGGCTTCGCCGACCACGTCCTGCTCCCCGTGCTGGG CGCGGACGCACCGGAGCTGCTCGCCGCCGCGGACCGGGAGCTCGCACCCGCGGTCACGGCGGACCTGCTGTCCCGGATCG TCGAGCTGGTGCCGGCGGAGTGGACGGACGTGCCCGGCTCGGCCTACGTCGACTGGCTGCTGTCCCGCGTCGAGGGGGAC CGTCCCTGGCTGGCGGCGATGCTCACCCCCGCCGAACCGCTCGTCGCCGCCGAGCGGCGTACCGGACGTCCCGACTGGCT GCTGGGAGGCTCCGGTGCCTGA
Upstream 100 bases:
>100_bases CGCGGTTCCCCCCGGCCCAGTCCGACGTCCGGTGCAGCCCGGTACCTCGGTGTCTGGCCCGGCCCGGCTGGCCGTGTGGG CCGGCGGGCATGCTGGTGCG
Downstream 100 bases:
>100_bases TCTGTTCGAGTACGCGATGATCCGCGTCGTGCCGCGAGTCGAACGCGGCGAGTGCGTCAACGTCGGTGTCCTGCTGTGGT GCCAACGGGCCGGCTTCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MLRHVLATRYATPLREGGSLPGVMEGDDLGTWVVKFTGAGQGPKALVAEVIVGELARGLGLAVPELVLVDVDPDLGRTEP DQEVQDLLRASPGRNLGMDYLPGSITYDPLAFPVEPALAARVVWLDAFTLNVDRSWRNPNLLVWGSRLWLIDHGAALYPH HDWPGAAAAVDRPLPGFADHVLLPVLGADAPELLAAADRELAPAVTADLLSRIVELVPAEWTDVPGSAYVDWLLSRVEGD RPWLAAMLTPAEPLVAAERRTGRPDWLLGGSGA
Sequences:
>Translated_273_residues MLRHVLATRYATPLREGGSLPGVMEGDDLGTWVVKFTGAGQGPKALVAEVIVGELARGLGLAVPELVLVDVDPDLGRTEP DQEVQDLLRASPGRNLGMDYLPGSITYDPLAFPVEPALAARVVWLDAFTLNVDRSWRNPNLLVWGSRLWLIDHGAALYPH HDWPGAAAAVDRPLPGFADHVLLPVLGADAPELLAAADRELAPAVTADLLSRIVELVPAEWTDVPGSAYVDWLLSRVEGD RPWLAAMLTPAEPLVAAERRTGRPDWLLGGSGA >Mature_273_residues MLRHVLATRYATPLREGGSLPGVMEGDDLGTWVVKFTGAGQGPKALVAEVIVGELARGLGLAVPELVLVDVDPDLGRTEP DQEVQDLLRASPGRNLGMDYLPGSITYDPLAFPVEPALAARVVWLDAFTLNVDRSWRNPNLLVWGSRLWLIDHGAALYPH HDWPGAAAAVDRPLPGFADHVLLPVLGADAPELLAAADRELAPAVTADLLSRIVELVPAEWTDVPGSAYVDWLLSRVEGD RPWLAAMLTPAEPLVAAERRTGRPDWLLGGSGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29277; Mature: 29277
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRHVLATRYATPLREGGSLPGVMEGDDLGTWVVKFTGAGQGPKALVAEVIVGELARGLG CCHHHHHHHHHCHHHCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCC LAVPELVLVDVDPDLGRTEPDQEVQDLLRASPGRNLGMDYLPGSITYDPLAFPVEPALAA CCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCHHHHH RVVWLDAFTLNVDRSWRNPNLLVWGSRLWLIDHGAALYPHHDWPGAAAAVDRPLPGFADH EEEEEEEEEEECCCCCCCCCEEEEECEEEEEECCCEECCCCCCCCCHHHHCCCCCCHHHH VLLPVLGADAPELLAAADRELAPAVTADLLSRIVELVPAEWTDVPGSAYVDWLLSRVEGD HHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC RPWLAAMLTPAEPLVAAERRTGRPDWLLGGSGA CCEEEEEECCCCHHHHHHHCCCCCCEECCCCCC >Mature Secondary Structure MLRHVLATRYATPLREGGSLPGVMEGDDLGTWVVKFTGAGQGPKALVAEVIVGELARGLG CCHHHHHHHHHCHHHCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCC LAVPELVLVDVDPDLGRTEPDQEVQDLLRASPGRNLGMDYLPGSITYDPLAFPVEPALAA CCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCHHHHH RVVWLDAFTLNVDRSWRNPNLLVWGSRLWLIDHGAALYPHHDWPGAAAAVDRPLPGFADH EEEEEEEEEEECCCCCCCCCEEEEECEEEEEECCCEECCCCCCCCCHHHHCCCCCCHHHH VLLPVLGADAPELLAAADRELAPAVTADLLSRIVELVPAEWTDVPGSAYVDWLLSRVEGD HHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC RPWLAAMLTPAEPLVAAERRTGRPDWLLGGSGA CCEEEEEECCCCHHHHHHHCCCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA