| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317252
Identifier: 158317252
GI number: 158317252
Start: 6657931
End: 6659637
Strand: Direct
Name: 158317252
Synonym: Franean1_5499
Alternate gene names: NA
Gene position: 6657931-6659637 (Clockwise)
Preceding gene: 158317251
Following gene: 158317253
Centisome position: 74.12
GC content: 74.87
Gene sequence:
>1707_bases ATGAACCAAGGTCCAGCCACCGAGTCTCTTCCCCCGCAGGTGCGCGGGCGGCACCGTTCGGGCCGGCGGGATTCCGCGCT GGCACCGTCCCAGCCGCTCGGGTCGGCGCAGGTAGCGGGCCAGGGGCTGCAGGAGGAGCCGCCGCCCGGCACGCGGGGAG TGCCCGGTCCGGCGGTGATTCCCGGGCAGGCGACACAGCCGCGTCGGCAGCACCCGAGCCTCGCGGCCTTCCCCGGGCTC GCCGGCCTCGCGCCCGAGCGGCTGCGCGGCCAGAGCGACCGGATCCGGGCGGCCATGCGGGGCGCGATCCCCCTCGCCCT CGCCGGGCTGATCGCCAACGCGGCCAACCTCGGGGTCACCCTGGTCATCGCGCGGGCCATGAGCACCCGCTCCTACGGCG CCGTCGCGCAGCTTTTCGCGATCTTCTTCGTCGTCTCGATGCCGGGCAGCGCCCTGCTCGTCGGTGTCGTCCGGCGGATC ACGAACTGGCAGCACACCGGCCAGGCCGACCTGATCGACGAGTGGATCGGCCGGGTCCGCCGGGCCGGCGTCATCATGGT CCTCGCCGTCGCCGTCCTGGCGATCATCGCGCGCGGGTTCGTCGCCCGCGAGCTCTCGCTGCCCGGAGCCGGCGGGGTCG CCGAGATCATCATCGCCGGAGCGGCCTGGTGCCTGCTGTGCGTCGACCGCGGGCTGATGCAGTGCGGGCGGCTTTACCCG TCGCTCGCCGCGAACCTGCTGGTGGACGCGGCGGTCAAGAGCGGCTCGACGATCGCGCTGGTCCTGGCCGGACTGGACGA GGCCGGCGCGGCCATCGCCGTGCTGCTCGGGGTACTCGCCGCACTCGCGCACACCCGTTACAGCCTGCGCCGGCACCCGT CGGCGATCATGCAGGCCGACCCGACCCGCCCCCAGGCCCAAGCGCCGCCGGCCCCCACCCAGCTCCCGGCCCCCACCCAG CTCCCGGCACCGCCGGCCCGCCAGCGCCGGCTCACCGGCGGCCGGTTGGGATCGCATCCGGCGGCGGGGCGTGGCGACGC CGACACCGGGGCGACGACGCTGCCGCTGCCGGTCGCCGGGCCGGCGGCCACCGCGGAGCCGCGGCGGCTCGCCATCGAGG TCGGCGCCGCGCTGGTGACACTGGCGTTCCTCGGTGTGCTGCAGAACATCGATGTGCTGCTGCAGGGCCGGCTCGCCCCG GACGAGTCGGGCTCCTACGCGGCCGTCTCCGTGGCGGCGAAGGTGATCGTGCTGGCCGCGATCGTCCTGGCCGGGTTCCT CCTGCCCGAGGCCGCGGACCGCAACCATCTCGGGCAGCATGCGCTGCATCAGCTCGGTGCGACGCTGGCGATACTCGCGG TGCCCGCGGTGGGGCTGCTCACCGTAGCGGCGATCGCACCCGACACACTGCTGTCGCTGGCTTTCGGGCCGCGTTTCACC AGTGCCTCCGGCGCTCTCCTCCCGCTGGCCGGAGCTATGACCTGTCTCGGAGCGACCGTGTTGTTCTCCCACTATCTGCT GGCTCTCGGCAAGCGTGCCGTGCTGGCCGTGCTCGCCGTCGCGACCGGCACCGCCGTCGCCCTCATGGCCTGGGCGCAGG GCTCCCCCGTGTCGACCGCGCGGGCGAACTTCGGCTGCCAGGCCGTGCTCGCCGTCGTCACCGGGCTGATGGTGCTCGCC GCCGCCCGCCGGACGGCCCGCGCGTGA
Upstream 100 bases:
>100_bases CACCCGCGCCGAGACCTGGCGTGGGTGAATACACACCCGGGCGCATGTCACGCCGTGTGATGGGGAGGGTACGCGCGTGC GCGACTCCGGGGGACAACCG
Downstream 100 bases:
>100_bases GCACGCTGCCGGAGGGCTCACTGCGCCCCACGACCATTCCGCCGCTGCCGGCACCGCCGTCCGCCGCCGGGCAGGTGCCC CTCGTCGGCACCGGGATGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 568; Mature: 568
Protein sequence:
>568_residues MNQGPATESLPPQVRGRHRSGRRDSALAPSQPLGSAQVAGQGLQEEPPPGTRGVPGPAVIPGQATQPRRQHPSLAAFPGL AGLAPERLRGQSDRIRAAMRGAIPLALAGLIANAANLGVTLVIARAMSTRSYGAVAQLFAIFFVVSMPGSALLVGVVRRI TNWQHTGQADLIDEWIGRVRRAGVIMVLAVAVLAIIARGFVARELSLPGAGGVAEIIIAGAAWCLLCVDRGLMQCGRLYP SLAANLLVDAAVKSGSTIALVLAGLDEAGAAIAVLLGVLAALAHTRYSLRRHPSAIMQADPTRPQAQAPPAPTQLPAPTQ LPAPPARQRRLTGGRLGSHPAAGRGDADTGATTLPLPVAGPAATAEPRRLAIEVGAALVTLAFLGVLQNIDVLLQGRLAP DESGSYAAVSVAAKVIVLAAIVLAGFLLPEAADRNHLGQHALHQLGATLAILAVPAVGLLTVAAIAPDTLLSLAFGPRFT SASGALLPLAGAMTCLGATVLFSHYLLALGKRAVLAVLAVATGTAVALMAWAQGSPVSTARANFGCQAVLAVVTGLMVLA AARRTARA
Sequences:
>Translated_568_residues MNQGPATESLPPQVRGRHRSGRRDSALAPSQPLGSAQVAGQGLQEEPPPGTRGVPGPAVIPGQATQPRRQHPSLAAFPGL AGLAPERLRGQSDRIRAAMRGAIPLALAGLIANAANLGVTLVIARAMSTRSYGAVAQLFAIFFVVSMPGSALLVGVVRRI TNWQHTGQADLIDEWIGRVRRAGVIMVLAVAVLAIIARGFVARELSLPGAGGVAEIIIAGAAWCLLCVDRGLMQCGRLYP SLAANLLVDAAVKSGSTIALVLAGLDEAGAAIAVLLGVLAALAHTRYSLRRHPSAIMQADPTRPQAQAPPAPTQLPAPTQ LPAPPARQRRLTGGRLGSHPAAGRGDADTGATTLPLPVAGPAATAEPRRLAIEVGAALVTLAFLGVLQNIDVLLQGRLAP DESGSYAAVSVAAKVIVLAAIVLAGFLLPEAADRNHLGQHALHQLGATLAILAVPAVGLLTVAAIAPDTLLSLAFGPRFT SASGALLPLAGAMTCLGATVLFSHYLLALGKRAVLAVLAVATGTAVALMAWAQGSPVSTARANFGCQAVLAVVTGLMVLA AARRTARA >Mature_568_residues MNQGPATESLPPQVRGRHRSGRRDSALAPSQPLGSAQVAGQGLQEEPPPGTRGVPGPAVIPGQATQPRRQHPSLAAFPGL AGLAPERLRGQSDRIRAAMRGAIPLALAGLIANAANLGVTLVIARAMSTRSYGAVAQLFAIFFVVSMPGSALLVGVVRRI TNWQHTGQADLIDEWIGRVRRAGVIMVLAVAVLAIIARGFVARELSLPGAGGVAEIIIAGAAWCLLCVDRGLMQCGRLYP SLAANLLVDAAVKSGSTIALVLAGLDEAGAAIAVLLGVLAALAHTRYSLRRHPSAIMQADPTRPQAQAPPAPTQLPAPTQ LPAPPARQRRLTGGRLGSHPAAGRGDADTGATTLPLPVAGPAATAEPRRLAIEVGAALVTLAFLGVLQNIDVLLQGRLAP DESGSYAAVSVAAKVIVLAAIVLAGFLLPEAADRNHLGQHALHQLGATLAILAVPAVGLLTVAAIAPDTLLSLAFGPRFT SASGALLPLAGAMTCLGATVLFSHYLLALGKRAVLAVLAVATGTAVALMAWAQGSPVSTARANFGCQAVLAVVTGLMVLA AARRTARA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57778; Mature: 57778
Theoretical pI: Translated: 11.74; Mature: 11.74
Prosite motif: PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQGPATESLPPQVRGRHRSGRRDSALAPSQPLGSAQVAGQGLQEEPPPGTRGVPGPAVI CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC PGQATQPRRQHPSLAAFPGLAGLAPERLRGQSDRIRAAMRGAIPLALAGLIANAANLGVT CCCCCCCHHCCCCCHHCCCCCCCCHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCHH LVIARAMSTRSYGAVAQLFAIFFVVSMPGSALLVGVVRRITNWQHTGQADLIDEWIGRVR HHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH RAGVIMVLAVAVLAIIARGFVARELSLPGAGGVAEIIIAGAAWCLLCVDRGLMQCGRLYP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLAANLLVDAAVKSGSTIALVLAGLDEAGAAIAVLLGVLAALAHTRYSLRRHPSAIMQAD HHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC PTRPQAQAPPAPTQLPAPTQLPAPPARQRRLTGGRLGSHPAAGRGDADTGATTLPLPVAG CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAATAEPRRLAIEVGAALVTLAFLGVLQNIDVLLQGRLAPDESGSYAAVSVAAKVIVLAA CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH IVLAGFLLPEAADRNHLGQHALHQLGATLAILAVPAVGLLTVAAIAPDTLLSLAFGPRFT HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCC SASGALLPLAGAMTCLGATVLFSHYLLALGKRAVLAVLAVATGTAVALMAWAQGSPVSTA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH RANFGCQAVLAVVTGLMVLAAARRTARA HHCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNQGPATESLPPQVRGRHRSGRRDSALAPSQPLGSAQVAGQGLQEEPPPGTRGVPGPAVI CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC PGQATQPRRQHPSLAAFPGLAGLAPERLRGQSDRIRAAMRGAIPLALAGLIANAANLGVT CCCCCCCHHCCCCCHHCCCCCCCCHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCHH LVIARAMSTRSYGAVAQLFAIFFVVSMPGSALLVGVVRRITNWQHTGQADLIDEWIGRVR HHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH RAGVIMVLAVAVLAIIARGFVARELSLPGAGGVAEIIIAGAAWCLLCVDRGLMQCGRLYP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLAANLLVDAAVKSGSTIALVLAGLDEAGAAIAVLLGVLAALAHTRYSLRRHPSAIMQAD HHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC PTRPQAQAPPAPTQLPAPTQLPAPPARQRRLTGGRLGSHPAAGRGDADTGATTLPLPVAG CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAATAEPRRLAIEVGAALVTLAFLGVLQNIDVLLQGRLAPDESGSYAAVSVAAKVIVLAA CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH IVLAGFLLPEAADRNHLGQHALHQLGATLAILAVPAVGLLTVAAIAPDTLLSLAFGPRFT HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCC SASGALLPLAGAMTCLGATVLFSHYLLALGKRAVLAVLAVATGTAVALMAWAQGSPVSTA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH RANFGCQAVLAVVTGLMVLAAARRTARA HHCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA