Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158317252

Identifier: 158317252

GI number: 158317252

Start: 6657931

End: 6659637

Strand: Direct

Name: 158317252

Synonym: Franean1_5499

Alternate gene names: NA

Gene position: 6657931-6659637 (Clockwise)

Preceding gene: 158317251

Following gene: 158317253

Centisome position: 74.12

GC content: 74.87

Gene sequence:

>1707_bases
ATGAACCAAGGTCCAGCCACCGAGTCTCTTCCCCCGCAGGTGCGCGGGCGGCACCGTTCGGGCCGGCGGGATTCCGCGCT
GGCACCGTCCCAGCCGCTCGGGTCGGCGCAGGTAGCGGGCCAGGGGCTGCAGGAGGAGCCGCCGCCCGGCACGCGGGGAG
TGCCCGGTCCGGCGGTGATTCCCGGGCAGGCGACACAGCCGCGTCGGCAGCACCCGAGCCTCGCGGCCTTCCCCGGGCTC
GCCGGCCTCGCGCCCGAGCGGCTGCGCGGCCAGAGCGACCGGATCCGGGCGGCCATGCGGGGCGCGATCCCCCTCGCCCT
CGCCGGGCTGATCGCCAACGCGGCCAACCTCGGGGTCACCCTGGTCATCGCGCGGGCCATGAGCACCCGCTCCTACGGCG
CCGTCGCGCAGCTTTTCGCGATCTTCTTCGTCGTCTCGATGCCGGGCAGCGCCCTGCTCGTCGGTGTCGTCCGGCGGATC
ACGAACTGGCAGCACACCGGCCAGGCCGACCTGATCGACGAGTGGATCGGCCGGGTCCGCCGGGCCGGCGTCATCATGGT
CCTCGCCGTCGCCGTCCTGGCGATCATCGCGCGCGGGTTCGTCGCCCGCGAGCTCTCGCTGCCCGGAGCCGGCGGGGTCG
CCGAGATCATCATCGCCGGAGCGGCCTGGTGCCTGCTGTGCGTCGACCGCGGGCTGATGCAGTGCGGGCGGCTTTACCCG
TCGCTCGCCGCGAACCTGCTGGTGGACGCGGCGGTCAAGAGCGGCTCGACGATCGCGCTGGTCCTGGCCGGACTGGACGA
GGCCGGCGCGGCCATCGCCGTGCTGCTCGGGGTACTCGCCGCACTCGCGCACACCCGTTACAGCCTGCGCCGGCACCCGT
CGGCGATCATGCAGGCCGACCCGACCCGCCCCCAGGCCCAAGCGCCGCCGGCCCCCACCCAGCTCCCGGCCCCCACCCAG
CTCCCGGCACCGCCGGCCCGCCAGCGCCGGCTCACCGGCGGCCGGTTGGGATCGCATCCGGCGGCGGGGCGTGGCGACGC
CGACACCGGGGCGACGACGCTGCCGCTGCCGGTCGCCGGGCCGGCGGCCACCGCGGAGCCGCGGCGGCTCGCCATCGAGG
TCGGCGCCGCGCTGGTGACACTGGCGTTCCTCGGTGTGCTGCAGAACATCGATGTGCTGCTGCAGGGCCGGCTCGCCCCG
GACGAGTCGGGCTCCTACGCGGCCGTCTCCGTGGCGGCGAAGGTGATCGTGCTGGCCGCGATCGTCCTGGCCGGGTTCCT
CCTGCCCGAGGCCGCGGACCGCAACCATCTCGGGCAGCATGCGCTGCATCAGCTCGGTGCGACGCTGGCGATACTCGCGG
TGCCCGCGGTGGGGCTGCTCACCGTAGCGGCGATCGCACCCGACACACTGCTGTCGCTGGCTTTCGGGCCGCGTTTCACC
AGTGCCTCCGGCGCTCTCCTCCCGCTGGCCGGAGCTATGACCTGTCTCGGAGCGACCGTGTTGTTCTCCCACTATCTGCT
GGCTCTCGGCAAGCGTGCCGTGCTGGCCGTGCTCGCCGTCGCGACCGGCACCGCCGTCGCCCTCATGGCCTGGGCGCAGG
GCTCCCCCGTGTCGACCGCGCGGGCGAACTTCGGCTGCCAGGCCGTGCTCGCCGTCGTCACCGGGCTGATGGTGCTCGCC
GCCGCCCGCCGGACGGCCCGCGCGTGA

Upstream 100 bases:

>100_bases
CACCCGCGCCGAGACCTGGCGTGGGTGAATACACACCCGGGCGCATGTCACGCCGTGTGATGGGGAGGGTACGCGCGTGC
GCGACTCCGGGGGACAACCG

Downstream 100 bases:

>100_bases
GCACGCTGCCGGAGGGCTCACTGCGCCCCACGACCATTCCGCCGCTGCCGGCACCGCCGTCCGCCGCCGGGCAGGTGCCC
CTCGTCGGCACCGGGATGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 568; Mature: 568

Protein sequence:

>568_residues
MNQGPATESLPPQVRGRHRSGRRDSALAPSQPLGSAQVAGQGLQEEPPPGTRGVPGPAVIPGQATQPRRQHPSLAAFPGL
AGLAPERLRGQSDRIRAAMRGAIPLALAGLIANAANLGVTLVIARAMSTRSYGAVAQLFAIFFVVSMPGSALLVGVVRRI
TNWQHTGQADLIDEWIGRVRRAGVIMVLAVAVLAIIARGFVARELSLPGAGGVAEIIIAGAAWCLLCVDRGLMQCGRLYP
SLAANLLVDAAVKSGSTIALVLAGLDEAGAAIAVLLGVLAALAHTRYSLRRHPSAIMQADPTRPQAQAPPAPTQLPAPTQ
LPAPPARQRRLTGGRLGSHPAAGRGDADTGATTLPLPVAGPAATAEPRRLAIEVGAALVTLAFLGVLQNIDVLLQGRLAP
DESGSYAAVSVAAKVIVLAAIVLAGFLLPEAADRNHLGQHALHQLGATLAILAVPAVGLLTVAAIAPDTLLSLAFGPRFT
SASGALLPLAGAMTCLGATVLFSHYLLALGKRAVLAVLAVATGTAVALMAWAQGSPVSTARANFGCQAVLAVVTGLMVLA
AARRTARA

Sequences:

>Translated_568_residues
MNQGPATESLPPQVRGRHRSGRRDSALAPSQPLGSAQVAGQGLQEEPPPGTRGVPGPAVIPGQATQPRRQHPSLAAFPGL
AGLAPERLRGQSDRIRAAMRGAIPLALAGLIANAANLGVTLVIARAMSTRSYGAVAQLFAIFFVVSMPGSALLVGVVRRI
TNWQHTGQADLIDEWIGRVRRAGVIMVLAVAVLAIIARGFVARELSLPGAGGVAEIIIAGAAWCLLCVDRGLMQCGRLYP
SLAANLLVDAAVKSGSTIALVLAGLDEAGAAIAVLLGVLAALAHTRYSLRRHPSAIMQADPTRPQAQAPPAPTQLPAPTQ
LPAPPARQRRLTGGRLGSHPAAGRGDADTGATTLPLPVAGPAATAEPRRLAIEVGAALVTLAFLGVLQNIDVLLQGRLAP
DESGSYAAVSVAAKVIVLAAIVLAGFLLPEAADRNHLGQHALHQLGATLAILAVPAVGLLTVAAIAPDTLLSLAFGPRFT
SASGALLPLAGAMTCLGATVLFSHYLLALGKRAVLAVLAVATGTAVALMAWAQGSPVSTARANFGCQAVLAVVTGLMVLA
AARRTARA
>Mature_568_residues
MNQGPATESLPPQVRGRHRSGRRDSALAPSQPLGSAQVAGQGLQEEPPPGTRGVPGPAVIPGQATQPRRQHPSLAAFPGL
AGLAPERLRGQSDRIRAAMRGAIPLALAGLIANAANLGVTLVIARAMSTRSYGAVAQLFAIFFVVSMPGSALLVGVVRRI
TNWQHTGQADLIDEWIGRVRRAGVIMVLAVAVLAIIARGFVARELSLPGAGGVAEIIIAGAAWCLLCVDRGLMQCGRLYP
SLAANLLVDAAVKSGSTIALVLAGLDEAGAAIAVLLGVLAALAHTRYSLRRHPSAIMQADPTRPQAQAPPAPTQLPAPTQ
LPAPPARQRRLTGGRLGSHPAAGRGDADTGATTLPLPVAGPAATAEPRRLAIEVGAALVTLAFLGVLQNIDVLLQGRLAP
DESGSYAAVSVAAKVIVLAAIVLAGFLLPEAADRNHLGQHALHQLGATLAILAVPAVGLLTVAAIAPDTLLSLAFGPRFT
SASGALLPLAGAMTCLGATVLFSHYLLALGKRAVLAVLAVATGTAVALMAWAQGSPVSTARANFGCQAVLAVVTGLMVLA
AARRTARA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57778; Mature: 57778

Theoretical pI: Translated: 11.74; Mature: 11.74

Prosite motif: PS00141 ASP_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQGPATESLPPQVRGRHRSGRRDSALAPSQPLGSAQVAGQGLQEEPPPGTRGVPGPAVI
CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC
PGQATQPRRQHPSLAAFPGLAGLAPERLRGQSDRIRAAMRGAIPLALAGLIANAANLGVT
CCCCCCCHHCCCCCHHCCCCCCCCHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCHH
LVIARAMSTRSYGAVAQLFAIFFVVSMPGSALLVGVVRRITNWQHTGQADLIDEWIGRVR
HHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
RAGVIMVLAVAVLAIIARGFVARELSLPGAGGVAEIIIAGAAWCLLCVDRGLMQCGRLYP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLAANLLVDAAVKSGSTIALVLAGLDEAGAAIAVLLGVLAALAHTRYSLRRHPSAIMQAD
HHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC
PTRPQAQAPPAPTQLPAPTQLPAPPARQRRLTGGRLGSHPAAGRGDADTGATTLPLPVAG
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PAATAEPRRLAIEVGAALVTLAFLGVLQNIDVLLQGRLAPDESGSYAAVSVAAKVIVLAA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
IVLAGFLLPEAADRNHLGQHALHQLGATLAILAVPAVGLLTVAAIAPDTLLSLAFGPRFT
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCC
SASGALLPLAGAMTCLGATVLFSHYLLALGKRAVLAVLAVATGTAVALMAWAQGSPVSTA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
RANFGCQAVLAVVTGLMVLAAARRTARA
HHCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNQGPATESLPPQVRGRHRSGRRDSALAPSQPLGSAQVAGQGLQEEPPPGTRGVPGPAVI
CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC
PGQATQPRRQHPSLAAFPGLAGLAPERLRGQSDRIRAAMRGAIPLALAGLIANAANLGVT
CCCCCCCHHCCCCCHHCCCCCCCCHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCHH
LVIARAMSTRSYGAVAQLFAIFFVVSMPGSALLVGVVRRITNWQHTGQADLIDEWIGRVR
HHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
RAGVIMVLAVAVLAIIARGFVARELSLPGAGGVAEIIIAGAAWCLLCVDRGLMQCGRLYP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLAANLLVDAAVKSGSTIALVLAGLDEAGAAIAVLLGVLAALAHTRYSLRRHPSAIMQAD
HHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC
PTRPQAQAPPAPTQLPAPTQLPAPPARQRRLTGGRLGSHPAAGRGDADTGATTLPLPVAG
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PAATAEPRRLAIEVGAALVTLAFLGVLQNIDVLLQGRLAPDESGSYAAVSVAAKVIVLAA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
IVLAGFLLPEAADRNHLGQHALHQLGATLAILAVPAVGLLTVAAIAPDTLLSLAFGPRFT
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCC
SASGALLPLAGAMTCLGATVLFSHYLLALGKRAVLAVLAVATGTAVALMAWAQGSPVSTA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
RANFGCQAVLAVVTGLMVLAAARRTARA
HHCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA