| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is cobK [H]
Identifier: 158317231
GI number: 158317231
Start: 6623562
End: 6624371
Strand: Reverse
Name: cobK [H]
Synonym: Franean1_5478
Alternate gene names: 158317231
Gene position: 6624371-6623562 (Counterclockwise)
Preceding gene: 158317233
Following gene: 158317229
Centisome position: 73.75
GC content: 77.41
Gene sequence:
>810_bases ATGACCCGGCGCGTGCTGCTGTTGGGCGGGACCGCCGAGGCCCGGCGGCTCGCCGCCGCCCTCGCCGACCGCGCGGATCT CGACGTGGTCTACTCCCTCGCCGGCCGGCTGAGGCCCCTGACAGTGCCGACGGTGCCGGCGGGGGCCACCGTCCGCAGCG GTGGGTTCGGTGGCCCGGACGGCCTGGTCGAGTTCCTGCGGGAACATGACGTGGCCGCGGTGGTCGACGCGACCCATCCC TTCGCGGCGCGGATCACGGCGGCGGCGGTCGCCGCATGCGCCGCGACCGGCGTGCCGCTGCTGGTGGTGCGCCGTCCCGG TTGGACGGAGAGCGACGGCGACGACTGGCGGCGGGTGCCGTCGCTGCCCGCGGCGGCCGCGCTGCTCGCCGCTGGCCGCC CCGGCGGGCCCGGCGATCCCGGTGAACCGGGCGAGCCCGGAGAGCGGCGCGGTCGCCGGGTGTTCCTCACTGTGGGCCGT TCCGGGGTCGCCGCCTTCGCCGGGCTCGACCACTGGTTCCTGGCGCGATCCGTCGAACCGCCGCCGGGGCCGGTCCCGCG ACGGCTGCGCGTCCTGCTCGACCGCGGCCCCTTCACCGTGGATGCGGAGACCGCGCTGCTGCGCCGCCACGAGGTCGACA CCGTCGTCACCAAGGACAGCGGCGGCTCACTGACGGCGGCCAAGCTGGTGGCCGCGCGCCGGCTCCGGCTGCCGGTCGTG ATGGTCGACCGGCCGCCGCTGCCCCGACAGGCCCGGGTCGTGGCCACGCCATCCGCCGCGGTCAGCTGGGTCACCGACGA GCTGCGCTGA
Upstream 100 bases:
>100_bases CGGAGCGGAGCTGATGAGACGGGCGGATGGGGGAGACTGGCGCTGTGCAGCCGGCCGGTCCCTACCGAGCACTCGGGGCC CGCCGGCCGGGTGCCGGCCG
Downstream 100 bases:
>100_bases CGTGCCCGGGGCTACGAGCGAGCCGCGGGAACCAGCCCGAGCGGCCGCGTCTGCCGGGCGTCGCGCAGGACGGCGCCCCA CCACTGGAGCTCGTCCAACA
Product: cobalt-precorrin-6x reductase
Products: NA
Alternate protein names: Precorrin-6X reductase [H]
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MTRRVLLLGGTAEARRLAAALADRADLDVVYSLAGRLRPLTVPTVPAGATVRSGGFGGPDGLVEFLREHDVAAVVDATHP FAARITAAAVAACAATGVPLLVVRRPGWTESDGDDWRRVPSLPAAAALLAAGRPGGPGDPGEPGEPGERRGRRVFLTVGR SGVAAFAGLDHWFLARSVEPPPGPVPRRLRVLLDRGPFTVDAETALLRRHEVDTVVTKDSGGSLTAAKLVAARRLRLPVV MVDRPPLPRQARVVATPSAAVSWVTDELR
Sequences:
>Translated_269_residues MTRRVLLLGGTAEARRLAAALADRADLDVVYSLAGRLRPLTVPTVPAGATVRSGGFGGPDGLVEFLREHDVAAVVDATHP FAARITAAAVAACAATGVPLLVVRRPGWTESDGDDWRRVPSLPAAAALLAAGRPGGPGDPGEPGEPGERRGRRVFLTVGR SGVAAFAGLDHWFLARSVEPPPGPVPRRLRVLLDRGPFTVDAETALLRRHEVDTVVTKDSGGSLTAAKLVAARRLRLPVV MVDRPPLPRQARVVATPSAAVSWVTDELR >Mature_268_residues TRRVLLLGGTAEARRLAAALADRADLDVVYSLAGRLRPLTVPTVPAGATVRSGGFGGPDGLVEFLREHDVAAVVDATHPF AARITAAAVAACAATGVPLLVVRRPGWTESDGDDWRRVPSLPAAAALLAAGRPGGPGDPGEPGEPGERRGRRVFLTVGRS GVAAFAGLDHWFLARSVEPPPGPVPRRLRVLLDRGPFTVDAETALLRRHEVDTVVTKDSGGSLTAAKLVAARRLRLPVVM VDRPPLPRQARVVATPSAAVSWVTDELR
Specific function: Catalyzes the reduction of the macrocycle of precorrin- 6X into precorrin-6Y [H]
COG id: COG2099
COG function: function code H; Precorrin-6x reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the precorrin-6x reductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003723 [H]
Pfam domain/function: PF02571 CbiJ [H]
EC number: =1.3.1.54 [H]
Molecular weight: Translated: 28265; Mature: 28134
Theoretical pI: Translated: 11.54; Mature: 11.54
Prosite motif: PS51014 COBK_CBIJ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRVLLLGGTAEARRLAAALADRADLDVVYSLAGRLRPLTVPTVPAGATVRSGGFGGPD CCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCHH GLVEFLREHDVAAVVDATHPFAARITAAAVAACAATGVPLLVVRRPGWTESDGDDWRRVP HHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHCC SLPAAAALLAAGRPGGPGDPGEPGEPGERRGRRVFLTVGRSGVAAFAGLDHWFLARSVEP CCHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCEEEEEECCCCHHHHHCCHHHHHHCCCCC PPGPVPRRLRVLLDRGPFTVDAETALLRRHEVDTVVTKDSGGSLTAAKLVAARRLRLPVV CCCCCCHHHHHHCCCCCEEECHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCEE MVDRPPLPRQARVVATPSAAVSWVTDELR EECCCCCCCCCEEEECCCHHHHHHHHHCC >Mature Secondary Structure TRRVLLLGGTAEARRLAAALADRADLDVVYSLAGRLRPLTVPTVPAGATVRSGGFGGPD CCEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCHH GLVEFLREHDVAAVVDATHPFAARITAAAVAACAATGVPLLVVRRPGWTESDGDDWRRVP HHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHCC SLPAAAALLAAGRPGGPGDPGEPGEPGERRGRRVFLTVGRSGVAAFAGLDHWFLARSVEP CCHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCEEEEEECCCCHHHHHCCHHHHHHCCCCC PPGPVPRRLRVLLDRGPFTVDAETALLRRHEVDTVVTKDSGGSLTAAKLVAARRLRLPVV CCCCCCHHHHHHCCCCCEEECHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCEE MVDRPPLPRQARVVATPSAAVSWVTDELR EECCCCCCCCCEEEECCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8200543 [H]