| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317205
Identifier: 158317205
GI number: 158317205
Start: 6595280
End: 6596074
Strand: Reverse
Name: 158317205
Synonym: Franean1_5452
Alternate gene names: NA
Gene position: 6596074-6595280 (Counterclockwise)
Preceding gene: 158317206
Following gene: 158317203
Centisome position: 73.44
GC content: 63.52
Gene sequence:
>795_bases ATGATCCATCGATGCCCCAGTCCGCACCGTCCACGATCACACCCCCAAAGAAGATCGCAGAATGAGATTCATCCCCGACC GCTTACGCATCGGGAGACGGCGCCGAAGTCCGCCGTCACGCTGGGGCCGGTCTCCCTGCTGGGTGACGAGGCGCCGCACC GTGACGCATCGATGGAGTGGTGGTACTTCACCGGGCACCTGCAGGGAAAGGACATCTTCGGGAAATCCCATGAGTATGGG TTCGAGATGACCATGATCCGTATGGATGCGCTGGGGACCGAGCCGGTCTCGGCGATCTGGAACGGGCATATCGCGATCAG CGACATCACCCGCCAGACCTTCAAGCAGGACGAGGCCACCTACTCGCTCCAGCCTGACGTCGTCCCGGCCGGTGGCGGCT TCAACAATACCGTCGGCCTGTACCACATGGACGGCAAGAACGGTGTCAACCATCTTTCGGGTGGCTTCGCGGACCTCGGC TACGCGGGCATCAACCTCACCCTCCGCCAGACGCAGCCGGCCGTTCTTCACGGGAATGCCGGCGTCATTCCCTACGCGCC GTTCGGCCAGTCCGGCTACTACTCCCAGACCAACCTCAAGGCGAGTGGAACGCTTCTGGACCACGGCGTGCTCGTGAACG TCACCGGCACCGCACCACCACGAACCTCGCCCCCGGCACCATCTCCTCGACGCACCTCGACCGTGACCGGCACCATAAGC GGTGCGAACATCACCGGTAAGGCGTACGCCGAGCTGACTCCGTCCATCACGCTTCCGACCCGCGGATCTGTGTGA
Upstream 100 bases:
>100_bases CGGTCTGGGGTGACCGAATCGGACTCGGCGTGCTGGAGCAGCTCGTCATCGGACCCTACGAACCAGGTGGATTCCGCGGC ATGCTCGACGGCGCGCCGGA
Downstream 100 bases:
>100_bases CAGGGAATCCTGGACGCGCTCAACCTCTGATCACACCCAGAGAGACGATGTCGCCACCGTCGCGGAAGCGGCGGTGGCGA CATCCTTGATTCCGGGCCGA
Product: secreted hydrolase-like protein
Products: NA
Alternate protein names: Secreted Hydrolase-Like Protein
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MIHRCPSPHRPRSHPQRRSQNEIHPRPLTHRETAPKSAVTLGPVSLLGDEAPHRDASMEWWYFTGHLQGKDIFGKSHEYG FEMTMIRMDALGTEPVSAIWNGHIAISDITRQTFKQDEATYSLQPDVVPAGGGFNNTVGLYHMDGKNGVNHLSGGFADLG YAGINLTLRQTQPAVLHGNAGVIPYAPFGQSGYYSQTNLKASGTLLDHGVLVNVTGTAPPRTSPPAPSPRRTSTVTGTIS GANITGKAYAELTPSITLPTRGSV
Sequences:
>Translated_264_residues MIHRCPSPHRPRSHPQRRSQNEIHPRPLTHRETAPKSAVTLGPVSLLGDEAPHRDASMEWWYFTGHLQGKDIFGKSHEYG FEMTMIRMDALGTEPVSAIWNGHIAISDITRQTFKQDEATYSLQPDVVPAGGGFNNTVGLYHMDGKNGVNHLSGGFADLG YAGINLTLRQTQPAVLHGNAGVIPYAPFGQSGYYSQTNLKASGTLLDHGVLVNVTGTAPPRTSPPAPSPRRTSTVTGTIS GANITGKAYAELTPSITLPTRGSV >Mature_264_residues MIHRCPSPHRPRSHPQRRSQNEIHPRPLTHRETAPKSAVTLGPVSLLGDEAPHRDASMEWWYFTGHLQGKDIFGKSHEYG FEMTMIRMDALGTEPVSAIWNGHIAISDITRQTFKQDEATYSLQPDVVPAGGGFNNTVGLYHMDGKNGVNHLSGGFADLG YAGINLTLRQTQPAVLHGNAGVIPYAPFGQSGYYSQTNLKASGTLLDHGVLVNVTGTAPPRTSPPAPSPRRTSTVTGTIS GANITGKAYAELTPSITLPTRGSV
Specific function: Unknown
COG id: COG5621
COG function: function code R; Predicted secreted hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28426; Mature: 28426
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHRCPSPHRPRSHPQRRSQNEIHPRPLTHRETAPKSAVTLGPVSLLGDEAPHRDASMEW CCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCEEEECCHHHHCCCCCCCCCCEEE WYFTGHLQGKDIFGKSHEYGFEMTMIRMDALGTEPVSAIWNGHIAISDITRQTFKQDEAT EEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHCCCEEEEHHHHHHHHCCCCE YSLQPDVVPAGGGFNNTVGLYHMDGKNGVNHLSGGFADLGYAGINLTLRQTQPAVLHGNA EEECCCEEECCCCCCCCEEEEEECCCCCCHHHCCCCCCCCEEEEEEEEECCCCEEEECCC GVIPYAPFGQSGYYSQTNLKASGTLLDHGVLVNVTGTAPPRTSPPAPSPRRTSTVTGTIS CEEECCCCCCCCCCCCCCCEECCEEEECCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEE GANITGKAYAELTPSITLPTRGSV CCCCCCEEEEEECCCEECCCCCCC >Mature Secondary Structure MIHRCPSPHRPRSHPQRRSQNEIHPRPLTHRETAPKSAVTLGPVSLLGDEAPHRDASMEW CCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCEEEECCHHHHCCCCCCCCCCEEE WYFTGHLQGKDIFGKSHEYGFEMTMIRMDALGTEPVSAIWNGHIAISDITRQTFKQDEAT EEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHCCCEEEEHHHHHHHHCCCCE YSLQPDVVPAGGGFNNTVGLYHMDGKNGVNHLSGGFADLGYAGINLTLRQTQPAVLHGNA EEECCCEEECCCCCCCCEEEEEECCCCCCHHHCCCCCCCCEEEEEEEEECCCCEEEECCC GVIPYAPFGQSGYYSQTNLKASGTLLDHGVLVNVTGTAPPRTSPPAPSPRRTSTVTGTIS CEEECCCCCCCCCCCCCCCEECCEEEECCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEE GANITGKAYAELTPSITLPTRGSV CCCCCCEEEEEECCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA