| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317183
Identifier: 158317183
GI number: 158317183
Start: 6569704
End: 6570210
Strand: Direct
Name: 158317183
Synonym: Franean1_5430
Alternate gene names: NA
Gene position: 6569704-6570210 (Clockwise)
Preceding gene: 158317182
Following gene: 158317184
Centisome position: 73.14
GC content: 67.26
Gene sequence:
>507_bases GTGGCCCGATTCCTGTTCGCCACAGTCCCGGCCGTCGGCCACACCGTGCCCGCGCTGCCCATCGCCCGCGCCCTGATCGA ACGCGGCCACACCGTGCGCTGGTACACCGGCGTCGCCTTCGCGGAAAAGATCACCGCCGTTGGTACGAAATTCCACCCGA TCACAGATCCCGACTTCGACTACAGCCTCGTCGGGTTGGAGGAGCATTATCCGCGGCGCCGGGAGCTGTCCGGGCTGAAA AAGCTGCAGTTCGACCTGGTTCAGGGATTCTCCAAGCCCGTGCCGAACCAGGTACGGGACCTGATGGCGCTGTTGCAGGA GGAGCCGGCTGACGCGGTGGTCACCGACACCGCATTCATCGGCGGGGTACTCCTGCAGGAACTGGGCGGACCGCCGGTGG CCGGGTTCGGCATCAGCGTCCTGCCTTTCCCCAGCAGGGATCTCGCGCCCTTCGGCATGGGTCTGGCGCCGGCCACCGGA CCCGCCGAGCGTCGCATCGTGGCGTAA
Upstream 100 bases:
>100_bases AGTCCGAGCATCGCTCGAACAGAATGCTTGACTGGCGCCCGATGTGGCAGCTCGCACGCAGGCTGCCCGCAGACATCGTC CTGTCTGAGGAGAATCCGTC
Downstream 100 bases:
>100_bases GCACCGTCAACCATCGGACCAATTACTACTGAACTACTGCCGAAATGTTTCTCCTCTTTGACTGCGAAGAGGCATCGCCA TCCGGCGGAAAGCAGCGCCG
Product: putative glycosyltransferase
Products: NA
Alternate protein names: Glycosyl Transferase Family Protein; UDP-Glucuronosyl/UDP-Glucosyltransferase; N-Glycosyltransferase; Glycosyltransferase MGT Family; Family; N-Glycosylation
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MARFLFATVPAVGHTVPALPIARALIERGHTVRWYTGVAFAEKITAVGTKFHPITDPDFDYSLVGLEEHYPRRRELSGLK KLQFDLVQGFSKPVPNQVRDLMALLQEEPADAVVTDTAFIGGVLLQELGGPPVAGFGISVLPFPSRDLAPFGMGLAPATG PAERRIVA
Sequences:
>Translated_168_residues MARFLFATVPAVGHTVPALPIARALIERGHTVRWYTGVAFAEKITAVGTKFHPITDPDFDYSLVGLEEHYPRRRELSGLK KLQFDLVQGFSKPVPNQVRDLMALLQEEPADAVVTDTAFIGGVLLQELGGPPVAGFGISVLPFPSRDLAPFGMGLAPATG PAERRIVA >Mature_167_residues ARFLFATVPAVGHTVPALPIARALIERGHTVRWYTGVAFAEKITAVGTKFHPITDPDFDYSLVGLEEHYPRRRELSGLKK LQFDLVQGFSKPVPNQVRDLMALLQEEPADAVVTDTAFIGGVLLQELGGPPVAGFGISVLPFPSRDLAPFGMGLAPATGP AERRIVA
Specific function: Unknown
COG id: COG1819
COG function: function code GC; Glycosyl transferases, related to UDP-glucuronosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18130; Mature: 17999
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARFLFATVPAVGHTVPALPIARALIERGHTVRWYTGVAFAEKITAVGTKFHPITDPDFD CCCHHEEHHHHHCCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCC YSLVGLEEHYPRRRELSGLKKLQFDLVQGFSKPVPNQVRDLMALLQEEPADAVVTDTAFI EEEECHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEHHHHHH GGVLLQELGGPPVAGFGISVLPFPSRDLAPFGMGLAPATGPAERRIVA HHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ARFLFATVPAVGHTVPALPIARALIERGHTVRWYTGVAFAEKITAVGTKFHPITDPDFD CCHHEEHHHHHCCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCC YSLVGLEEHYPRRRELSGLKKLQFDLVQGFSKPVPNQVRDLMALLQEEPADAVVTDTAFI EEEECHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEHHHHHH GGVLLQELGGPPVAGFGISVLPFPSRDLAPFGMGLAPATGPAERRIVA HHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA