| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317178
Identifier: 158317178
GI number: 158317178
Start: 6563933
End: 6564970
Strand: Reverse
Name: 158317178
Synonym: Franean1_5425
Alternate gene names: NA
Gene position: 6564970-6563933 (Counterclockwise)
Preceding gene: 158317179
Following gene: 158317172
Centisome position: 73.09
GC content: 69.36
Gene sequence:
>1038_bases GTGACCTGCGACGATGACAGGGACACACCCGGCCAGCGATCAAGGAGTCTGGCACTGACGCAGAAACCGGTCGGCCTGGT CGCCCGGATGGAACACCATCAGGTCGCGGTCTATCTCACTGCCATGACCGCCGGTGCCGTGCTCGGCCTTACGGCACCCG GCCTCGGACCGGGTCTGGAACACGCGATCAACCCGCTGCTCGGGGCGCTTCTCTACGTGACGTTCCTCCAGGTCCCCGCC GCCGAACTGGCCCGCTCCCTGCGCGACGGGCGGTTCCTCGCCGCCGCGCTGGTCGTGAACTTCGCAGTCGTGCCGCTTGT GGTCGCCGCGATGTTTCCGTTCCTGCCGGACGATCAGGCCGTCCGCCTCGGGGTGCTGCTGGTTCTGCTCTGTCCCTGCA TCGACTGGGTCATCGTGTTCACCGGCCTTGCCGGAGGCAGCGGCCGGCGTCTGCTCGCCGCGACCCCGCTGCTCCTGCTC GCGCAGATGCTGGTCCTTCCCGTCCTGCTGTTCGCCTTCCTCGGCTCCGGCCTGGCCGACATCGTCGACGCGGGACCCTT CCTCCGGGCGTTCCTCACCCTGATCGTCGTTCCGCTGGCCCTGGCCTGGGTCACCCAGGGCTGGGCAGCCCGCAGGCCAG CCGGGCAGACCGTGTCGGAGACGGTCAGCACGGCGATCGTCCTGCTGATGGCCGCCGTGCTCATCGCCGTGGTCGCCTCC CAGCTCCCGAAACTCGACGGCAGGCTCGGTGACGTCGCCGCCGTCGTCCCGTTCTACCTGGCGTTCCTCGCCGTCATGGC GTTCACCGGGAAGGCACTGGCCCGTCTGTTCCGCCTCGACGTCCCCTCGGGACGGGCGGTGCTGTTCACCGGTGCCACCC GTAACTCCCTCGTCGTCCTCCCGCTCGCCCTCGCTCTGCCCGACGAGTTCGCCGTCGTACCGGTCGTCGTGGTCACCCAG ACCCTCGTCGAAGTCCTCGGCATGGTCGCCTACGTCCGGCTCGTGCCACGACTACTCCCCACACCCCACCCCACCTGA
Upstream 100 bases:
>100_bases CTGGTGACGGCACACGACTCAGCCGGAGGGGGACGGGCGGGCCTTCTGTACCTACCCGGCGCTGAACCGCACGACCCCGA CGGGAGACGGCGGGGCGCCG
Downstream 100 bases:
>100_bases TCTGAGGTGGGAGACTTCCTGTGCCACTCCAGGAGTCCGATGATCAGATGTCGGGCTGCGGGCGGAGGCGGGCGAGGAGG CCGGCGGCCTGCTGGGTGAC
Product: bile acid:sodium symporter
Products: NA
Alternate protein names: SodiumBile Acid Symporter Family Protein; Efflux Protein; Arsenite Efflux Pump ACR3-Like Permease; Na+-Dependent Transporter; Efflux Protein Bile AcidSodium Symporter Family Protein; Bile AcidSodium Symporter Family Protein; Sodium Symporter; Sodium Bile Acid Symporter Family; Arsenite Efflux Pump; Arsenical-Resistance; Transporter-Like Membrane Protein; Sodium-Dependent Transporter; ArsB-Like Efflux Protein; Efflux Pump; Arsenite Efflux Pump Or Related Permease; Arsenite Efflux Pump ACR3 And Related Permeases
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MTCDDDRDTPGQRSRSLALTQKPVGLVARMEHHQVAVYLTAMTAGAVLGLTAPGLGPGLEHAINPLLGALLYVTFLQVPA AELARSLRDGRFLAAALVVNFAVVPLVVAAMFPFLPDDQAVRLGVLLVLLCPCIDWVIVFTGLAGGSGRRLLAATPLLLL AQMLVLPVLLFAFLGSGLADIVDAGPFLRAFLTLIVVPLALAWVTQGWAARRPAGQTVSETVSTAIVLLMAAVLIAVVAS QLPKLDGRLGDVAAVVPFYLAFLAVMAFTGKALARLFRLDVPSGRAVLFTGATRNSLVVLPLALALPDEFAVVPVVVVTQ TLVEVLGMVAYVRLVPRLLPTPHPT
Sequences:
>Translated_345_residues MTCDDDRDTPGQRSRSLALTQKPVGLVARMEHHQVAVYLTAMTAGAVLGLTAPGLGPGLEHAINPLLGALLYVTFLQVPA AELARSLRDGRFLAAALVVNFAVVPLVVAAMFPFLPDDQAVRLGVLLVLLCPCIDWVIVFTGLAGGSGRRLLAATPLLLL AQMLVLPVLLFAFLGSGLADIVDAGPFLRAFLTLIVVPLALAWVTQGWAARRPAGQTVSETVSTAIVLLMAAVLIAVVAS QLPKLDGRLGDVAAVVPFYLAFLAVMAFTGKALARLFRLDVPSGRAVLFTGATRNSLVVLPLALALPDEFAVVPVVVVTQ TLVEVLGMVAYVRLVPRLLPTPHPT >Mature_344_residues TCDDDRDTPGQRSRSLALTQKPVGLVARMEHHQVAVYLTAMTAGAVLGLTAPGLGPGLEHAINPLLGALLYVTFLQVPAA ELARSLRDGRFLAAALVVNFAVVPLVVAAMFPFLPDDQAVRLGVLLVLLCPCIDWVIVFTGLAGGSGRRLLAATPLLLLA QMLVLPVLLFAFLGSGLADIVDAGPFLRAFLTLIVVPLALAWVTQGWAARRPAGQTVSETVSTAIVLLMAAVLIAVVASQ LPKLDGRLGDVAAVVPFYLAFLAVMAFTGKALARLFRLDVPSGRAVLFTGATRNSLVVLPLALALPDEFAVVPVVVVTQT LVEVLGMVAYVRLVPRLLPTPHPT
Specific function: Unknown
COG id: COG0798
COG function: function code P; Arsenite efflux pump ACR3 and related permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36304; Mature: 36173
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTCDDDRDTPGQRSRSLALTQKPVGLVARMEHHQVAVYLTAMTAGAVLGLTAPGLGPGLE CCCCCCCCCCCCHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH HAINPLLGALLYVTFLQVPAAELARSLRDGRFLAAALVVNFAVVPLVVAAMFPFLPDDQA HHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH VRLGVLLVLLCPCIDWVIVFTGLAGGSGRRLLAATPLLLLAQMLVLPVLLFAFLGSGLAD HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH IVDAGPFLRAFLTLIVVPLALAWVTQGWAARRPAGQTVSETVSTAIVLLMAAVLIAVVAS HHCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QLPKLDGRLGDVAAVVPFYLAFLAVMAFTGKALARLFRLDVPSGRAVLFTGATRNSLVVL HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEE PLALALPDEFAVVPVVVVTQTLVEVLGMVAYVRLVPRLLPTPHPT HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TCDDDRDTPGQRSRSLALTQKPVGLVARMEHHQVAVYLTAMTAGAVLGLTAPGLGPGLE CCCCCCCCCCCHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH HAINPLLGALLYVTFLQVPAAELARSLRDGRFLAAALVVNFAVVPLVVAAMFPFLPDDQA HHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH VRLGVLLVLLCPCIDWVIVFTGLAGGSGRRLLAATPLLLLAQMLVLPVLLFAFLGSGLAD HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH IVDAGPFLRAFLTLIVVPLALAWVTQGWAARRPAGQTVSETVSTAIVLLMAAVLIAVVAS HHCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QLPKLDGRLGDVAAVVPFYLAFLAVMAFTGKALARLFRLDVPSGRAVLFTGATRNSLVVL HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEE PLALALPDEFAVVPVVVVTQTLVEVLGMVAYVRLVPRLLPTPHPT HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA