| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317171
Identifier: 158317171
GI number: 158317171
Start: 6539230
End: 6540885
Strand: Reverse
Name: 158317171
Synonym: Franean1_5418
Alternate gene names: NA
Gene position: 6540885-6539230 (Counterclockwise)
Preceding gene: 158317172
Following gene: 158317170
Centisome position: 72.82
GC content: 70.65
Gene sequence:
>1656_bases ATGACACTGCGAATGCCCAAGGAGCTGCGCTCCTACCAGTTCGACAAGCTGACCGGCGTCGAGCTGAACGACTTCGACGT CGACCGGTTCCTGCCGGTGCTGTTCGAGATGGTGGAGACGAAGGGCCGCCGGCTCTCCCGGTCGAACGCCGACCCGAAGG ACCCGGGCCGGTACGTCGAGGCACTCGCCGCCCATCCGAACCTGCGCGGCTTCGCCGACGAGCACGGCCGCGCGGTGCTG GAACAGTGGGTCAACAGCAGCGTCGTCCGGCTCGGTCACAGCGGCCGCGGTCGCGGGGACGTCCAGCTCGCCGCGGTCCA GCCGATCCACATCGGCGCCTACCGGGCCGGCCTGCCGGTCGAGGGCGCCCGGCACCGCAAGGTGCATCTGGTCGTCTACC GGCTGCTGAAGGAGGCGTTGCTGCGCAGGGGCGCCCCCGACCCGGAGCAGACGCTGCAACGGCTGTTCCGCGAGGCGTTC GGCCGTGGCGTCGCCATCGACTCGCTTTTCGTCCCGGCCTTCGACGGGAAGACCGACGACCTCGACGCGAACGTGCTGCT CAGCCTCTACTACCTGGAGGGCTTTCAACCCGGGAAGGTCCTGGCCAGCAGGCCCGATCTCGACTGGAGCCCGGTCATGC CCGGGGTGATGATCTCCCTCGGCGATCTGCTGCTCGACTTCCTGACCGTCTACCGCAACCGGCTGCCCACGATCGCGCTC GCGCGTCACCTGGCCGCGCTGCTCAACATCGGCCTGTTCACGACGACGCTGCGGCTGTTCAGCGTGGTGGGCGAGCTGTG CCGCGGCGGCGCGGACGGGCCGCCGCCGACCGACCTCAGCCGCGACCTGCATCCCGCGCGGACCGAGATCTACGTCGACT TCACCCGCCAGACGGGCGGCGACTCCGACCGGCTGGCCGGCGAGTGCGTCGACCGCGACCTGGAACGGCTACCGGCCTAC TTCGAGGACATGATCCTGCTCAAGACCCTCGACCGGTACGCGAGCAGTGAGCAGAGGCTCCGGCCGTACGTGGAGGGCAG GCGCGGCCCGGACTGGCTTGCCGCCCTGGTCGGGATCCGCGGCCTGGAGTACGTCGAGTGGCGCGCCGGCCTGGACATCG AACGGATCATCGAGACGACCAGGGCCGAGATGCGGATGCCCGAGGACGAGGCCAGGACGGAGCTCTCCGCGCTCGCGCCC GGCGGGTCGCAGCTGGACGTCCTGCTCGCGGCGATCCGGCAGTCCCAGGGGGCGAAGGCCGTCACCAGCGCCGGCAGCTG GTTCTGGAACACGGGGGGCCTGCGCAAGCAGGCGGGCCTGCTGCGCGGGAACCTGCGCGGCCGGAGGGCGTGGCGGTACG CGATGACCGACGAGCTGCTCACCACCATGCTGCTGACCACGCTGATGGACCCGGTGACCGGCGCGCCGACGCCCCGGATG CGACTGGCCGACCTGCTCGACACCCTGGAGCACCGCTGGGGCCTGCTGATCCACCACCCGCCGGCCGCGCGTGACGACGC GTCCGCACGCGCGGTCGCGAGCCAGAACCTGACGGCGTTCACCGGGCGGCTGCACCAGATGGGCTTCTTCGCGGACCTCG CCGACGACTTCAACGCCCAGTATGTGATCAATCCTCTTGCTGGAGCGCGGCGATGA
Upstream 100 bases:
>100_bases CCCTCCAGCCCGCGAGCCGAGTGATCATCATCGAGCCCAACGGCCAGCGGAACGTCATCAAGGTGACCGGAACGACCATC GAACTGCTGCGGGACGCCCG
Downstream 100 bases:
>100_bases CCGATCTCAGCCCACTGCTGGCCACCCGGGTCGCCAACCGGCTGGTGACGGACTTCCTGCGCGCAGCTCCCCCCGGCCGC TGCATGCGGCTCGACCACCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 551; Mature: 550
Protein sequence:
>551_residues MTLRMPKELRSYQFDKLTGVELNDFDVDRFLPVLFEMVETKGRRLSRSNADPKDPGRYVEALAAHPNLRGFADEHGRAVL EQWVNSSVVRLGHSGRGRGDVQLAAVQPIHIGAYRAGLPVEGARHRKVHLVVYRLLKEALLRRGAPDPEQTLQRLFREAF GRGVAIDSLFVPAFDGKTDDLDANVLLSLYYLEGFQPGKVLASRPDLDWSPVMPGVMISLGDLLLDFLTVYRNRLPTIAL ARHLAALLNIGLFTTTLRLFSVVGELCRGGADGPPPTDLSRDLHPARTEIYVDFTRQTGGDSDRLAGECVDRDLERLPAY FEDMILLKTLDRYASSEQRLRPYVEGRRGPDWLAALVGIRGLEYVEWRAGLDIERIIETTRAEMRMPEDEARTELSALAP GGSQLDVLLAAIRQSQGAKAVTSAGSWFWNTGGLRKQAGLLRGNLRGRRAWRYAMTDELLTTMLLTTLMDPVTGAPTPRM RLADLLDTLEHRWGLLIHHPPAARDDASARAVASQNLTAFTGRLHQMGFFADLADDFNAQYVINPLAGARR
Sequences:
>Translated_551_residues MTLRMPKELRSYQFDKLTGVELNDFDVDRFLPVLFEMVETKGRRLSRSNADPKDPGRYVEALAAHPNLRGFADEHGRAVL EQWVNSSVVRLGHSGRGRGDVQLAAVQPIHIGAYRAGLPVEGARHRKVHLVVYRLLKEALLRRGAPDPEQTLQRLFREAF GRGVAIDSLFVPAFDGKTDDLDANVLLSLYYLEGFQPGKVLASRPDLDWSPVMPGVMISLGDLLLDFLTVYRNRLPTIAL ARHLAALLNIGLFTTTLRLFSVVGELCRGGADGPPPTDLSRDLHPARTEIYVDFTRQTGGDSDRLAGECVDRDLERLPAY FEDMILLKTLDRYASSEQRLRPYVEGRRGPDWLAALVGIRGLEYVEWRAGLDIERIIETTRAEMRMPEDEARTELSALAP GGSQLDVLLAAIRQSQGAKAVTSAGSWFWNTGGLRKQAGLLRGNLRGRRAWRYAMTDELLTTMLLTTLMDPVTGAPTPRM RLADLLDTLEHRWGLLIHHPPAARDDASARAVASQNLTAFTGRLHQMGFFADLADDFNAQYVINPLAGARR >Mature_550_residues TLRMPKELRSYQFDKLTGVELNDFDVDRFLPVLFEMVETKGRRLSRSNADPKDPGRYVEALAAHPNLRGFADEHGRAVLE QWVNSSVVRLGHSGRGRGDVQLAAVQPIHIGAYRAGLPVEGARHRKVHLVVYRLLKEALLRRGAPDPEQTLQRLFREAFG RGVAIDSLFVPAFDGKTDDLDANVLLSLYYLEGFQPGKVLASRPDLDWSPVMPGVMISLGDLLLDFLTVYRNRLPTIALA RHLAALLNIGLFTTTLRLFSVVGELCRGGADGPPPTDLSRDLHPARTEIYVDFTRQTGGDSDRLAGECVDRDLERLPAYF EDMILLKTLDRYASSEQRLRPYVEGRRGPDWLAALVGIRGLEYVEWRAGLDIERIIETTRAEMRMPEDEARTELSALAPG GSQLDVLLAAIRQSQGAKAVTSAGSWFWNTGGLRKQAGLLRGNLRGRRAWRYAMTDELLTTMLLTTLMDPVTGAPTPRMR LADLLDTLEHRWGLLIHHPPAARDDASARAVASQNLTAFTGRLHQMGFFADLADDFNAQYVINPLAGARR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61420; Mature: 61289
Theoretical pI: Translated: 7.81; Mature: 7.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLRMPKELRSYQFDKLTGVELNDFDVDRFLPVLFEMVETKGRRLSRSNADPKDPGRYVE CCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHH ALAAHPNLRGFADEHGRAVLEQWVNSSVVRLGHSGRGRGDVQLAAVQPIHIGAYRAGLPV HHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHCCCCCCCCCEEEEEECCEEECCEECCCCC EGARHRKVHLVVYRLLKEALLRRGAPDPEQTLQRLFREAFGRGVAIDSLFVPAFDGKTDD CCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEHHEEEECCCCCCCC LDANVLLSLYYLEGFQPGKVLASRPDLDWSPVMPGVMISLGDLLLDFLTVYRNRLPTIAL CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH ARHLAALLNIGLFTTTLRLFSVVGELCRGGADGPPPTDLSRDLHPARTEIYVDFTRQTGG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCC DSDRLAGECVDRDLERLPAYFEDMILLKTLDRYASSEQRLRPYVEGRRGPDWLAALVGIR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHC GLEYVEWRAGLDIERIIETTRAEMRMPEDEARTELSALAPGGSQLDVLLAAIRQSQGAKA CCHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHH VTSAGSWFWNTGGLRKQAGLLRGNLRGRRAWRYAMTDELLTTMLLTTLMDPVTGAPTPRM HHHCCCCEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH RLADLLDTLEHRWGLLIHHPPAARDDASARAVASQNLTAFTGRLHQMGFFADLADDFNAQ HHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCE YVINPLAGARR EEEECCCCCCC >Mature Secondary Structure TLRMPKELRSYQFDKLTGVELNDFDVDRFLPVLFEMVETKGRRLSRSNADPKDPGRYVE CCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHH ALAAHPNLRGFADEHGRAVLEQWVNSSVVRLGHSGRGRGDVQLAAVQPIHIGAYRAGLPV HHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHCCCCCCCCCEEEEEECCEEECCEECCCCC EGARHRKVHLVVYRLLKEALLRRGAPDPEQTLQRLFREAFGRGVAIDSLFVPAFDGKTDD CCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEHHEEEECCCCCCCC LDANVLLSLYYLEGFQPGKVLASRPDLDWSPVMPGVMISLGDLLLDFLTVYRNRLPTIAL CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH ARHLAALLNIGLFTTTLRLFSVVGELCRGGADGPPPTDLSRDLHPARTEIYVDFTRQTGG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCC DSDRLAGECVDRDLERLPAYFEDMILLKTLDRYASSEQRLRPYVEGRRGPDWLAALVGIR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHC GLEYVEWRAGLDIERIIETTRAEMRMPEDEARTELSALAPGGSQLDVLLAAIRQSQGAKA CCHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHH VTSAGSWFWNTGGLRKQAGLLRGNLRGRRAWRYAMTDELLTTMLLTTLMDPVTGAPTPRM HHHCCCCEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH RLADLLDTLEHRWGLLIHHPPAARDDASARAVASQNLTAFTGRLHQMGFFADLADDFNAQ HHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCE YVINPLAGARR EEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA