| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317162
Identifier: 158317162
GI number: 158317162
Start: 6523888
End: 6524499
Strand: Reverse
Name: 158317162
Synonym: Franean1_5409
Alternate gene names: NA
Gene position: 6524499-6523888 (Counterclockwise)
Preceding gene: 158317165
Following gene: 158317161
Centisome position: 72.64
GC content: 72.55
Gene sequence:
>612_bases ATGGACCTCACCATCCAGCCGATCTTCGGCCTTCCCGACCCCCCCAGCACGGCGTGGGTGGACGACGTCCTGTCCGCCGT CCACGACGACGCCGGCGCCCTCGTCAGCCGGGCCATGTCGACGAGCGGGGACGACGGCGCACCGGACGGGTTGATCACGC TCTGGCGCGACACCGGATCCGCGTCGACCGGCCCCGCAGCCCCCGCGGTCGACGCCGGCGGCGGCGTCCGGCTGGGCGCC GGACGCCGTTACACGGTGACCGGACACTTCGCCGGCGCCGCCACCGGTCCGGCCCGCTACCTGCGGCAGGCCAGCTTCGA CGGACCACGCACCCCGCGGTGGACCGCGGCCTTCGACCGGGCAGGCACCGAGCGGATCTGGCCGGCCCTTCGCGATCTGC CCGGCATCGTCGCAACGCTGGCAGGCCGAGCAGACGACGGCGCCACCGTGATGTACCTGCTGGCCGAAACCATCGAGGCA CTGGAAGCGGCCACCAGACGGGTCATGTCGACATCGTTGCTCCCCAGCGAGGACCCAGCCCTACTCACCGGCCCGGACCG AGTAGAGATCCATCGCCTGATGCACGCCGTACTGCCCACCGCCGGGTCGTGA
Upstream 100 bases:
>100_bases TTCCGTGCCGAAGTTCCGTACTGGCACTGAGGGACAGGGGCAGCCGGCGCGGGATCGTCGACCACGATCACCGGAACCCG ACCGACGCAGGAGGCGCCCG
Downstream 100 bases:
>100_bases CCGAGATCGGGTGGAGGGTGCCCGCGGCCGGGCCAGTTCGCCGGCGCGACGGCGGTTTCTGGAAAGAACAATGAGCAGGA TATTGTAATGTTGGGCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MDLTIQPIFGLPDPPSTAWVDDVLSAVHDDAGALVSRAMSTSGDDGAPDGLITLWRDTGSASTGPAAPAVDAGGGVRLGA GRRYTVTGHFAGAATGPARYLRQASFDGPRTPRWTAAFDRAGTERIWPALRDLPGIVATLAGRADDGATVMYLLAETIEA LEAATRRVMSTSLLPSEDPALLTGPDRVEIHRLMHAVLPTAGS
Sequences:
>Translated_203_residues MDLTIQPIFGLPDPPSTAWVDDVLSAVHDDAGALVSRAMSTSGDDGAPDGLITLWRDTGSASTGPAAPAVDAGGGVRLGA GRRYTVTGHFAGAATGPARYLRQASFDGPRTPRWTAAFDRAGTERIWPALRDLPGIVATLAGRADDGATVMYLLAETIEA LEAATRRVMSTSLLPSEDPALLTGPDRVEIHRLMHAVLPTAGS >Mature_203_residues MDLTIQPIFGLPDPPSTAWVDDVLSAVHDDAGALVSRAMSTSGDDGAPDGLITLWRDTGSASTGPAAPAVDAGGGVRLGA GRRYTVTGHFAGAATGPARYLRQASFDGPRTPRWTAAFDRAGTERIWPALRDLPGIVATLAGRADDGATVMYLLAETIEA LEAATRRVMSTSLLPSEDPALLTGPDRVEIHRLMHAVLPTAGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21098; Mature: 21098
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLTIQPIFGLPDPPSTAWVDDVLSAVHDDAGALVSRAMSTSGDDGAPDGLITLWRDTGS CCEEECCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCC ASTGPAAPAVDAGGGVRLGAGRRYTVTGHFAGAATGPARYLRQASFDGPRTPRWTAAFDR CCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHH AGTERIWPALRDLPGIVATLAGRADDGATVMYLLAETIEALEAATRRVMSTSLLPSEDPA CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC LLTGPDRVEIHRLMHAVLPTAGS EEECCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDLTIQPIFGLPDPPSTAWVDDVLSAVHDDAGALVSRAMSTSGDDGAPDGLITLWRDTGS CCEEECCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCC ASTGPAAPAVDAGGGVRLGAGRRYTVTGHFAGAATGPARYLRQASFDGPRTPRWTAAFDR CCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHH AGTERIWPALRDLPGIVATLAGRADDGATVMYLLAETIEALEAATRRVMSTSLLPSEDPA CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC LLTGPDRVEIHRLMHAVLPTAGS EEECCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA