| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317161
Identifier: 158317161
GI number: 158317161
Start: 6523063
End: 6523800
Strand: Reverse
Name: 158317161
Synonym: Franean1_5408
Alternate gene names: NA
Gene position: 6523800-6523063 (Counterclockwise)
Preceding gene: 158317162
Following gene: 158317160
Centisome position: 72.63
GC content: 64.23
Gene sequence:
>738_bases ATGTTGGGCGGCGAATGCATTGTCGTTGCCGTCGCCCTGAGGCTGGCGGCTGGGCTGGGCTACCTGGTGGCCACCTCCCG GGGCGCCATCCAGCCGAATCCGGTCAGCTGGTTGTTCTGGGGGCTGACGCCACTGGTGGCTTTTGTCGCGCAGGTCCAGG ACGGCGTCACGCCGCAGGCCTGGGTTACTCTCACGCTCGGTACCAGCCCCTTGCTAATCTTTGTCGTGTCGGTGGCCAAG AAGTCGCACTGGCGGGTCGGCCGGTTCGATGCGCTGTGCGGCGGGTCCGCCACGGCCGGCATCGTGCTCTGGCAGATCAG CAGCGACCCAGCTCTTGCCATCGTGTTCAGCATTCTGGCCGACATTCTGGCCTCCATCCCCACGCTGGCGAAAGCGTACG AGACACCAGGCTCGGAGAGAGCGTCTCCATACTTCGTGAGCATGGTGAGCATGACGGTGACCTTGCTGACGATATCCGAA TGGAAATTTTTGGAGTGCGCTTTCCCGCTGTACATGCTGCTTATCAACACGGCTATCTTCAGCGTCGTCCGACTACGTTC GGGCCAGCTCGATGGTCTCCCGCACAAGCAGGGCGGGAGGCACCGGCGCCGTCCGGCGGCGCTGTTCGTGACAGCGCCCC CCGGTACGCGCGTCCCCCCTTTCCGTGACGCGGCGCTCACCGAACCTGACTTCGGAACGGAGCTTCTCTGTCACGCATCG GGCTCAGTGCCCGTCTAG
Upstream 100 bases:
>100_bases CGCCGGGTCGTGACCGAGATCGGGTGGAGGGTGCCCGCGGCCGGGCCAGTTCGCCGGCGCGACGGCGGTTTCTGGAAAGA ACAATGAGCAGGATATTGTA
Downstream 100 bases:
>100_bases CCCGAGTTCGCCGCTTGATCACGGGCGCCGCATGCCCGCCGGCCCCACCATTCCCGTCCCTTCCCCCACCGTCCCCAGGA GTGAACCCGTGATCTCGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MLGGECIVVAVALRLAAGLGYLVATSRGAIQPNPVSWLFWGLTPLVAFVAQVQDGVTPQAWVTLTLGTSPLLIFVVSVAK KSHWRVGRFDALCGGSATAGIVLWQISSDPALAIVFSILADILASIPTLAKAYETPGSERASPYFVSMVSMTVTLLTISE WKFLECAFPLYMLLINTAIFSVVRLRSGQLDGLPHKQGGRHRRRPAALFVTAPPGTRVPPFRDAALTEPDFGTELLCHAS GSVPV
Sequences:
>Translated_245_residues MLGGECIVVAVALRLAAGLGYLVATSRGAIQPNPVSWLFWGLTPLVAFVAQVQDGVTPQAWVTLTLGTSPLLIFVVSVAK KSHWRVGRFDALCGGSATAGIVLWQISSDPALAIVFSILADILASIPTLAKAYETPGSERASPYFVSMVSMTVTLLTISE WKFLECAFPLYMLLINTAIFSVVRLRSGQLDGLPHKQGGRHRRRPAALFVTAPPGTRVPPFRDAALTEPDFGTELLCHAS GSVPV >Mature_245_residues MLGGECIVVAVALRLAAGLGYLVATSRGAIQPNPVSWLFWGLTPLVAFVAQVQDGVTPQAWVTLTLGTSPLLIFVVSVAK KSHWRVGRFDALCGGSATAGIVLWQISSDPALAIVFSILADILASIPTLAKAYETPGSERASPYFVSMVSMTVTLLTISE WKFLECAFPLYMLLINTAIFSVVRLRSGQLDGLPHKQGGRHRRRPAALFVTAPPGTRVPPFRDAALTEPDFGTELLCHAS GSVPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26143; Mature: 26143
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGGECIVVAVALRLAAGLGYLVATSRGAIQPNPVSWLFWGLTPLVAFVAQVQDGVTPQA CCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCE WVTLTLGTSPLLIFVVSVAKKSHWRVGRFDALCGGSATAGIVLWQISSDPALAIVFSILA EEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHH DILASIPTLAKAYETPGSERASPYFVSMVSMTVTLLTISEWKFLECAFPLYMLLINTAIF HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHH SVVRLRSGQLDGLPHKQGGRHRRRPAALFVTAPPGTRVPPFRDAALTEPDFGTELLCHAS HHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECC GSVPV CCCCC >Mature Secondary Structure MLGGECIVVAVALRLAAGLGYLVATSRGAIQPNPVSWLFWGLTPLVAFVAQVQDGVTPQA CCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCE WVTLTLGTSPLLIFVVSVAKKSHWRVGRFDALCGGSATAGIVLWQISSDPALAIVFSILA EEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHH DILASIPTLAKAYETPGSERASPYFVSMVSMTVTLLTISEWKFLECAFPLYMLLINTAIF HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHH SVVRLRSGQLDGLPHKQGGRHRRRPAALFVTAPPGTRVPPFRDAALTEPDFGTELLCHAS HHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECC GSVPV CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA