| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158317125
Identifier: 158317125
GI number: 158317125
Start: 6473712
End: 6473990
Strand: Reverse
Name: 158317125
Synonym: Franean1_5369
Alternate gene names: NA
Gene position: 6473990-6473712 (Counterclockwise)
Preceding gene: 158317126
Following gene: 158317124
Centisome position: 72.08
GC content: 73.12
Gene sequence:
>279_bases ATGGGCCGACGCGGGTGGCAGGCCATCTATGTCGAGGTGGGCGCGGTACACCGCGCCGGCCACCGCGCGGAGAACGGCGA CACTGACCGCGCTGCCGAGCTGGCGCAGCGCCATGATGAGCGCCGAGCCGGCGCCGCCGCACAGACGCACCTCGGCCGGG GGCTCCGGGCGATCCTCACACACGTACTGATCTTCCACTGGAACCGGCTCGGCCTGTCCGCCACCAGCCAGGCCGTCCTC GCCCACGCGGCTGCCGCAGCCCTTCTGCCACGGGACTGA
Upstream 100 bases:
>100_bases CAACGCCGTGGACGAAGGCAGCGCGGGCGGACCGCAGCAAATCCTCCGAGTCACGCTGGTGGGCCACGGTGAGGCCGGCC GAGATACCCCGTCGCGCCGC
Downstream 100 bases:
>100_bases CGGACCATGAATGCGTGGAAGCAGTACGTGCACCCAACCAGCACTAATGCGAACCTGAACCTGCAGGTCAACGGTCCGAC TGTGTCCATCGAAGGTGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 92; Mature: 91
Protein sequence:
>92_residues MGRRGWQAIYVEVGAVHRAGHRAENGDTDRAAELAQRHDERRAGAAAQTHLGRGLRAILTHVLIFHWNRLGLSATSQAVL AHAAAAALLPRD
Sequences:
>Translated_92_residues MGRRGWQAIYVEVGAVHRAGHRAENGDTDRAAELAQRHDERRAGAAAQTHLGRGLRAILTHVLIFHWNRLGLSATSQAVL AHAAAAALLPRD >Mature_91_residues GRRGWQAIYVEVGAVHRAGHRAENGDTDRAAELAQRHDERRAGAAAQTHLGRGLRAILTHVLIFHWNRLGLSATSQAVLA HAAAAALLPRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9961; Mature: 9830
Theoretical pI: Translated: 11.81; Mature: 11.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRRGWQAIYVEVGAVHRAGHRAENGDTDRAAELAQRHDERRAGAAAQTHLGRGLRAILT CCCCCCEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHH HVLIFHWNRLGLSATSQAVLAHAAAAALLPRD HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GRRGWQAIYVEVGAVHRAGHRAENGDTDRAAELAQRHDERRAGAAAQTHLGRGLRAILT CCCCCEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHH HVLIFHWNRLGLSATSQAVLAHAAAAALLPRD HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA