| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317111
Identifier: 158317111
GI number: 158317111
Start: 6458463
End: 6459710
Strand: Direct
Name: 158317111
Synonym: Franean1_5355
Alternate gene names: NA
Gene position: 6458463-6459710 (Clockwise)
Preceding gene: 158317110
Following gene: 158317115
Centisome position: 71.9
GC content: 67.47
Gene sequence:
>1248_bases TTGAACCGGACCGGGACCGGGGTCGTATCAGGAGGCATGAGAGAACACCGCCGCACCGCCCGGGCGCTGCCGCCTCAGGC CGCCGCGCCACTCGGCTCGCCCGAGGGAGCCACCACCATGAAACGGCGTACCTACGCCAGGCGCAACGGGCTGCGTAAGC TGGTCGTCGGCAGCTCCGCGGCGCTGGTACTGGCGATTTCCGCGGGTGTCGCCCAGGCCGCCGAGGAGACACAGTTCTAC AGCAACACAAGTCTCGGCTCTCCGAGCTACCCGGCCTACTACGGAGTAGGCGACACCGAGTTCGCCGACGACGTTCCGTT CAGCGGCAGCCATCTGATCAGCTCCTTCACCTTCGGCTACCAGTCGCCGGAGCCGGTGCATGCCACCTTCCGCTTCTATG GCGTGGATTCGGCCACCGGACTGCCGGGCGAGCAGGTGGCCCAGATCGAACGCGATTTCCCCGCCGTGAGCGAGGCCACC CCGACCGTCACGTTGAGCGAGGCGGAGCAGTTCTGGTGGACCGCCGGACCCAACCTGTATCCGGGCGAGTTCAACGGCAG CGTTCCCACCGGGGCCTGGTACAGCATCCAGTTCTCCGTCGCCGATGGAGGGTTTCCGGATGCGCGCTTCCGCCTCGCCA AGGGCACCAGTAGCACTGGGATGCTGAATGTCGAGACGGGTTCCTTCGTCACCCTCACCGACACGAACGGCTCCTCGCCG ACATCCATGTACCTGCAGGTGCGCGACGTCGGGAGCACCGGCGAGGTACAGCCGGCGTTGATCAATCTGATTGCCTCTCC GGCGACGGTCAAGGCTGGTAACAGCCTCGGCAACACGGCCAAGCTGCTTCCGGTCCTGAGCAGCGACGCGCTGGCAGACG GAACGACGGTCACTCTCAGCTCCAGCAACCCGAGAGTCGCGAGCGTCCCGTCGCAAACCGTCATTCCGGCCGGGGCCTCC AACGTCACGGTCAATGTCACGACCGCGAGGCGGGTCCGCACCACGGAGACCGTCACCTTCACCGCGACGGCCAACGGCAC AAGCGTCAGCACTCAGCTGACGGTCACGCCGTCGCCACCGTACGGCCCCGAGCGGCCATGCCGGGCGAAACCCGGCATGG CCGCCGGGACGTTGACGAGGCCCTCGGTCCTGGTCATGAGGGGGGCGTCGGCGTTGCCGCGGTCGTCGTACCAGCTACCG ACCGGGTCGGCGGCGCGGATGCGGGTGATGGTGCCGTTGACGACGTAG
Upstream 100 bases:
>100_bases TAGATCCCGTCCGACAGCCGGCGCGCGAGGTCAGGAACGATCCCGATAACCTAATTGACCTTGACAGCCCATTTACCGCC GTTTCGGAGACAGGCGGACG
Downstream 100 bases:
>100_bases ACGAAGCCTTTGACCCGGGTCCGGCGGGCCGGGGCAATGGGCCACTCCTGTAAACGATCATTTAACGGACCATGAGTTCC GGACGTCCACGATCCGGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 415; Mature: 415
Protein sequence:
>415_residues MNRTGTGVVSGGMREHRRTARALPPQAAAPLGSPEGATTMKRRTYARRNGLRKLVVGSSAALVLAISAGVAQAAEETQFY SNTSLGSPSYPAYYGVGDTEFADDVPFSGSHLISSFTFGYQSPEPVHATFRFYGVDSATGLPGEQVAQIERDFPAVSEAT PTVTLSEAEQFWWTAGPNLYPGEFNGSVPTGAWYSIQFSVADGGFPDARFRLAKGTSSTGMLNVETGSFVTLTDTNGSSP TSMYLQVRDVGSTGEVQPALINLIASPATVKAGNSLGNTAKLLPVLSSDALADGTTVTLSSSNPRVASVPSQTVIPAGAS NVTVNVTTARRVRTTETVTFTATANGTSVSTQLTVTPSPPYGPERPCRAKPGMAAGTLTRPSVLVMRGASALPRSSYQLP TGSAARMRVMVPLTT
Sequences:
>Translated_415_residues MNRTGTGVVSGGMREHRRTARALPPQAAAPLGSPEGATTMKRRTYARRNGLRKLVVGSSAALVLAISAGVAQAAEETQFY SNTSLGSPSYPAYYGVGDTEFADDVPFSGSHLISSFTFGYQSPEPVHATFRFYGVDSATGLPGEQVAQIERDFPAVSEAT PTVTLSEAEQFWWTAGPNLYPGEFNGSVPTGAWYSIQFSVADGGFPDARFRLAKGTSSTGMLNVETGSFVTLTDTNGSSP TSMYLQVRDVGSTGEVQPALINLIASPATVKAGNSLGNTAKLLPVLSSDALADGTTVTLSSSNPRVASVPSQTVIPAGAS NVTVNVTTARRVRTTETVTFTATANGTSVSTQLTVTPSPPYGPERPCRAKPGMAAGTLTRPSVLVMRGASALPRSSYQLP TGSAARMRVMVPLTT >Mature_415_residues MNRTGTGVVSGGMREHRRTARALPPQAAAPLGSPEGATTMKRRTYARRNGLRKLVVGSSAALVLAISAGVAQAAEETQFY SNTSLGSPSYPAYYGVGDTEFADDVPFSGSHLISSFTFGYQSPEPVHATFRFYGVDSATGLPGEQVAQIERDFPAVSEAT PTVTLSEAEQFWWTAGPNLYPGEFNGSVPTGAWYSIQFSVADGGFPDARFRLAKGTSSTGMLNVETGSFVTLTDTNGSSP TSMYLQVRDVGSTGEVQPALINLIASPATVKAGNSLGNTAKLLPVLSSDALADGTTVTLSSSNPRVASVPSQTVIPAGAS NVTVNVTTARRVRTTETVTFTATANGTSVSTQLTVTPSPPYGPERPCRAKPGMAAGTLTRPSVLVMRGASALPRSSYQLP TGSAARMRVMVPLTT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43248; Mature: 43248
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRTGTGVVSGGMREHRRTARALPPQAAAPLGSPEGATTMKRRTYARRNGLRKLVVGSSA CCCCCCEEEECCHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCC ALVLAISAGVAQAAEETQFYSNTSLGSPSYPAYYGVGDTEFADDVPFSGSHLISSFTFGY EEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHEEECCC QSPEPVHATFRFYGVDSATGLPGEQVAQIERDFPAVSEATPTVTLSEAEQFWWTAGPNLY CCCCCEEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCC PGEFNGSVPTGAWYSIQFSVADGGFPDARFRLAKGTSSTGMLNVETGSFVTLTDTNGSSP CCCCCCCCCCCEEEEEEEEECCCCCCHHEEEEECCCCCCCEEEECCCCEEEEECCCCCCC TSMYLQVRDVGSTGEVQPALINLIASPATVKAGNSLGNTAKLLPVLSSDALADGTTVTLS EEEEEEEEECCCCCCCCHHHHHHHCCCCEEECCCCCCCCEEEEEEECCCCCCCCCEEEEC SSNPRVASVPSQTVIPAGASNVTVNVTTARRVRTTETVTFTATANGTSVSTQLTVTPSPP CCCCEEEECCCCEEECCCCCCEEEEEEECCEEEEEEEEEEEEECCCCEEEEEEEECCCCC YGPERPCRAKPGMAAGTLTRPSVLVMRGASALPRSSYQLPTGSAARMRVMVPLTT CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure MNRTGTGVVSGGMREHRRTARALPPQAAAPLGSPEGATTMKRRTYARRNGLRKLVVGSSA CCCCCCEEEECCHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCC ALVLAISAGVAQAAEETQFYSNTSLGSPSYPAYYGVGDTEFADDVPFSGSHLISSFTFGY EEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHEEECCC QSPEPVHATFRFYGVDSATGLPGEQVAQIERDFPAVSEATPTVTLSEAEQFWWTAGPNLY CCCCCEEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCC PGEFNGSVPTGAWYSIQFSVADGGFPDARFRLAKGTSSTGMLNVETGSFVTLTDTNGSSP CCCCCCCCCCCEEEEEEEEECCCCCCHHEEEEECCCCCCCEEEECCCCEEEEECCCCCCC TSMYLQVRDVGSTGEVQPALINLIASPATVKAGNSLGNTAKLLPVLSSDALADGTTVTLS EEEEEEEEECCCCCCCCHHHHHHHCCCCEEECCCCCCCCEEEEEEECCCCCCCCCEEEEC SSNPRVASVPSQTVIPAGASNVTVNVTTARRVRTTETVTFTATANGTSVSTQLTVTPSPP CCCCEEEECCCCEEECCCCCCEEEEEEECCEEEEEEEEEEEEECCCCEEEEEEEECCCCC YGPERPCRAKPGMAAGTLTRPSVLVMRGASALPRSSYQLPTGSAARMRVMVPLTT CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA