| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317110
Identifier: 158317110
GI number: 158317110
Start: 6457711
End: 6458301
Strand: Direct
Name: 158317110
Synonym: Franean1_5354
Alternate gene names: NA
Gene position: 6457711-6458301 (Clockwise)
Preceding gene: 158317106
Following gene: 158317111
Centisome position: 71.9
GC content: 68.7
Gene sequence:
>591_bases ATGAAGAAGATCGCGATGGTCCTGTCCCTTGGAGTGACAAGCCTCGTCCTCGTGGCCTGCGGCAGCAACGGGGAGTCGGG CGCCGCCGCGGGCAGCGCGACAACCGCGACGACGTCGTCGGCTCCGGCGCCATCGCCGACCAGTACCCCCGCCAGCGGCG GCGGGACCACCTCCGGACCGGCCGCCACGCTGGACGTCAGCACCAGCCAGTTCGGCACGATCCTGGTCGACGGCGGTGGT CGGACGCTCTACCTGTTCGAAGCCGACCGGGGCTCCGCCTCCGTCTGCTCGCAAGACTGCGCGACGGCATGGCCGCCCTA CGTCGTGTCCCAGGTACCGGAAGCCGGTTCCGAGGTCACGGCGAGCGAGATCGGCACGACCACCCGAGTGGACGGCACGC TTCAGGTGACCTACCACGGCCATCCGCTGTACTACTTCGCCAAGGACACCACGGCTGGGGCCGTCATGGGGCAGGGAATC GACAAGTTCGGCGGCAAGTGGTTCGCCGTCGGACCTGACGGCAACCCGATCGAAGGCGGCTGGCCCACACCGCCGGGCGA AAATTCCGAATATTCCCGCGACGCCGAGTAG
Upstream 100 bases:
>100_bases TCGGGATGCGGGCTCGTAGAACCACGGGACGAATCAGCGCAAGCGCTGCCTGGCAGCGGACGCCCCGTCCGCGGTGCCGG CAGCCGAATCGGGAGACCGC
Downstream 100 bases:
>100_bases TTGTGTGACACGTCGAGCGCCCCGGACGGCGTCCGGGCGCTCGCAGCCGTCGACTCAATACTAGATCCCGTCCGACAGCC GGCGCGCGAGGTCAGGAACG
Product: hypothetical protein
Products: NA
Alternate protein names: Blue Copper Domain Protein; Exported Lipoprotein; Exported Protein
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MKKIAMVLSLGVTSLVLVACGSNGESGAAAGSATTATTSSAPAPSPTSTPASGGGTTSGPAATLDVSTSQFGTILVDGGG RTLYLFEADRGSASVCSQDCATAWPPYVVSQVPEAGSEVTASEIGTTTRVDGTLQVTYHGHPLYYFAKDTTAGAVMGQGI DKFGGKWFAVGPDGNPIEGGWPTPPGENSEYSRDAE
Sequences:
>Translated_196_residues MKKIAMVLSLGVTSLVLVACGSNGESGAAAGSATTATTSSAPAPSPTSTPASGGGTTSGPAATLDVSTSQFGTILVDGGG RTLYLFEADRGSASVCSQDCATAWPPYVVSQVPEAGSEVTASEIGTTTRVDGTLQVTYHGHPLYYFAKDTTAGAVMGQGI DKFGGKWFAVGPDGNPIEGGWPTPPGENSEYSRDAE >Mature_196_residues MKKIAMVLSLGVTSLVLVACGSNGESGAAAGSATTATTSSAPAPSPTSTPASGGGTTSGPAATLDVSTSQFGTILVDGGG RTLYLFEADRGSASVCSQDCATAWPPYVVSQVPEAGSEVTASEIGTTTRVDGTLQVTYHGHPLYYFAKDTTAGAVMGQGI DKFGGKWFAVGPDGNPIEGGWPTPPGENSEYSRDAE
Specific function: Unknown
COG id: COG4315
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19646; Mature: 19646
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIAMVLSLGVTSLVLVACGSNGESGAAAGSATTATTSSAPAPSPTSTPASGGGTTSGP CCHHHHHHHHCHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AATLDVSTSQFGTILVDGGGRTLYLFEADRGSASVCSQDCATAWPPYVVSQVPEAGSEVT EEEEEECCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHCCCCCCCEE ASEIGTTTRVDGTLQVTYHGHPLYYFAKDTTAGAVMGQGIDKFGGKWFAVGPDGNPIEGG HHHCCCEEECCCEEEEEECCCEEEEEECCCCCCHHHHCCHHHHCCEEEEECCCCCCCCCC WPTPPGENSEYSRDAE CCCCCCCCCCCCCCCC >Mature Secondary Structure MKKIAMVLSLGVTSLVLVACGSNGESGAAAGSATTATTSSAPAPSPTSTPASGGGTTSGP CCHHHHHHHHCHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AATLDVSTSQFGTILVDGGGRTLYLFEADRGSASVCSQDCATAWPPYVVSQVPEAGSEVT EEEEEECCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHCCCCCCCEE ASEIGTTTRVDGTLQVTYHGHPLYYFAKDTTAGAVMGQGIDKFGGKWFAVGPDGNPIEGG HHHCCCEEECCCEEEEEECCCEEEEEECCCCCCHHHHCCHHHHCCEEEEECCCCCCCCCC WPTPPGENSEYSRDAE CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA