| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317098
Identifier: 158317098
GI number: 158317098
Start: 6441471
End: 6441947
Strand: Reverse
Name: 158317098
Synonym: Franean1_5342
Alternate gene names: NA
Gene position: 6441947-6441471 (Counterclockwise)
Preceding gene: 158317099
Following gene: 158317097
Centisome position: 71.72
GC content: 71.28
Gene sequence:
>477_bases GTGGATGACCGTCCTGGCGGATCGTCGTCGACGAGCTCGGTCTGCCGGTGTCGATGGAGCCACGCCTGTCGGGGCCCGAT CACGGCGAGGCGGACGGCAGGCCCTGGGCGGACATCATCGCCGAGTTCGGCGGGCACCCCTCAAGGCCGGCCGGAGGAGC CTTTCGCGCCCGGGTCGGAGAGCTGGGGCCAGTTCCTCGTGCGGGCGGGTGGCTGCCTGCGGGAGTTGGCTGACCGTCAC GACGGTCAGCGGGTGCTGGTCATCGCGAACGGCGAGACGGTGGAAGCGGCCCATCGGCTGCTGATGGGTGTGCCCGCATC GGCCCGCCTGTCCTACGGTTTCTCTGTCGCCTGCGCGTCGCTGACCTGGTGGTCACACCGCTGGTCCTCGGCCGGGACCA CCCGATGGTCCCTCGTGGTGCACGGCGCGACCGACGGCTTCCACTCGATCCGACCCGGTCGGGAGAACCGCGGCTGA
Upstream 100 bases:
>100_bases GAGGTCGTCAGGTCACACACTGCGTGGTTCTGGCACCTTCGGCAACGGGATACCACGAGGTCGGGCTGCTCTTTGAGTCG CCAAAGGTGATCATCTCGCC
Downstream 100 bases:
>100_bases CCGCTCGATGTGGTGAGCCCGGTACGTCGAGTCGACCATAGGAGTCGGGCTGCGCCGGCCAGTAACCGCGTCCGTTCGGC ACCGCCACCAATGCCCTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MDDRPGGSSSTSSVCRCRWSHACRGPITARRTAGPGRTSSPSSAGTPQGRPEEPFAPGSESWGQFLVRAGGCLRELADRH DGQRVLVIANGETVEAAHRLLMGVPASARLSYGFSVACASLTWWSHRWSSAGTTRWSLVVHGATDGFHSIRPGRENRG
Sequences:
>Translated_158_residues MDDRPGGSSSTSSVCRCRWSHACRGPITARRTAGPGRTSSPSSAGTPQGRPEEPFAPGSESWGQFLVRAGGCLRELADRH DGQRVLVIANGETVEAAHRLLMGVPASARLSYGFSVACASLTWWSHRWSSAGTTRWSLVVHGATDGFHSIRPGRENRG >Mature_158_residues MDDRPGGSSSTSSVCRCRWSHACRGPITARRTAGPGRTSSPSSAGTPQGRPEEPFAPGSESWGQFLVRAGGCLRELADRH DGQRVLVIANGETVEAAHRLLMGVPASARLSYGFSVACASLTWWSHRWSSAGTTRWSLVVHGATDGFHSIRPGRENRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16887; Mature: 16887
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDRPGGSSSTSSVCRCRWSHACRGPITARRTAGPGRTSSPSSAGTPQGRPEEPFAPGSE CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH SWGQFLVRAGGCLRELADRHDGQRVLVIANGETVEAAHRLLMGVPASARLSYGFSVACAS HHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCHHEECCCCEEHHHH LTWWSHRWSSAGTTRWSLVVHGATDGFHSIRPGRENRG HHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MDDRPGGSSSTSSVCRCRWSHACRGPITARRTAGPGRTSSPSSAGTPQGRPEEPFAPGSE CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH SWGQFLVRAGGCLRELADRHDGQRVLVIANGETVEAAHRLLMGVPASARLSYGFSVACAS HHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCHHEECCCCEEHHHH LTWWSHRWSSAGTTRWSLVVHGATDGFHSIRPGRENRG HHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA