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The map label for this gene is perM [C]

Identifier: 158317061

GI number: 158317061

Start: 6386002

End: 6387396

Strand: Reverse

Name: perM [C]

Synonym: Franean1_5305

Alternate gene names: 158317061

Gene position: 6387396-6386002 (Counterclockwise)

Preceding gene: 158317063

Following gene: 158317060

Centisome position: 71.11

GC content: 74.77

Gene sequence:

>1395_bases
GTGGCGGGACTGGGCCGGGTCCCGGTCCGGCGTGGCCCGAGGAGGGCGGCCGCGGACGCCGCGGCCGACTCCGGGGCCGC
CGGCTCCGCCACACCAGGCTCGGCGGGCCCGGCCACACCAGGCTCCGCGGGTTCCGCCGGGGGCCCGGGTCCCGACGGCC
GGCCCGCTCCGGCCGGCCCGCGCCAGCGCATCCCACGCCGGCTGCGCCTCGCCCGCTCGGGGGCCGGTGCCGGCCCGCCC
GAGCAGGAGCCACGCCGGGCCGGAGCGGCCGGAGCGGGCGGAGCGGGCGGCGCCGCCGCTGGCGCCGCGCAGGGCTCGAC
GGCGCGCCGCGCCGAGCAGCACGTGCCGGTGTCCCTCCGCGTCGCCTCCGCGTGGTCCTGGCGTCTGCTCATCATCGGGA
CGGCCGTCTACGTGCTGGCCATGATCGTGGGACGGGTGCGGATCGTCGTGATCCCGGTCATCGCCGGCCTGCTCATCGCG
GCTCTCATCCACCCGATCGCGCACCGGTTCCAGCGGATGGGCGTGCCCAGGCTCGGCGCGGCGTTCGCGGCCCTGCTGAT
CTTCCTGCTGCTCGTCGTCGGGGCCGGCGTCGCGGTGGGCTTCAACGCCGCCAACGAGATCCCCGCGGTGGCCGACCAGG
TCAGCGAGGGCGTGGACCAGGTCCGGGACTACCTGACGGACGGGCCGTTCCACCTTTCCCAGGGCCAGATCGACAACCTG
GTCGACGACATCCGCAGCAGCATCACGAGCAACCGCGGCCGGGTGGTCTCCGGCGTGCTGTCGACGGCGTCGGTCGCCGC
GGAGGTGCTGACCAGCATTCTGGTCGCACTGTTCTCGACCTTCTTCTTCCTCTACGACGGCGAGCGGATCTGGAGCTGGA
TCGTCACCCGGTTCCCCAGCGGGGCCGAGGACCGGGTTCGCGGCGCGGGTCGGGAGGCCTGGCTCACCCTCACCGGTTAC
ATCCGGGGCACGGTGTTCGTCGCCGCGGTGGACGCGGTCGGCATCACGATCGGGTTGGTCGCCGTCGGCGCCCCGCTCGT
CGCGCCGCTGGCGCTGCTGACGTTCTTCGGCGGCTTCATCCCGATCGTCGGCGCGACCGTCGCCGGCATTGCCGCCGTGC
TGGTCGCGCTCGTGTCGAACGGCGTGCCCGACGCGCTGATCATCCTGGGCGTCGTGATCGCGGTGCAGCAGGTCGAGGGC
CACCTGCTGCAGCCGCTGGTGATGCGCCGGGCGGTCCGGCTGCATCCGCTGGCCATCGTCATCGCGCTGTCCGCGGGTGG
CGTGCTCGCCGGGATCCCGGGGGCGATCGCGGCGGTGCCCTTCGTCGCGGTGGTCAACCGGGTGGCGACATACCTGGCCT
CGGCCGGGAAGGATCCGCAGCCCGCGGATGGTTGA

Upstream 100 bases:

>100_bases
TTGTTCTCACCCTTGGTGGAAGCTTGCACCGACCATCGGGTTGGATGTCCCGAAGGACGAAACCTTCAGACACCGGACGT
AGGGGGCAGCGGTGCGGCGG

Downstream 100 bases:

>100_bases
CGTGGGAACGAGGCCCGATGGCCCTTCCGAGCCATCGGGCCGGACCCCGTCCTGTTCCGTACGCCACCTTTGGAGCCGCC
ATGTCAGCCGACGTCGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 464; Mature: 463

Protein sequence:

>464_residues
MAGLGRVPVRRGPRRAAADAAADSGAAGSATPGSAGPATPGSAGSAGGPGPDGRPAPAGPRQRIPRRLRLARSGAGAGPP
EQEPRRAGAAGAGGAGGAAAGAAQGSTARRAEQHVPVSLRVASAWSWRLLIIGTAVYVLAMIVGRVRIVVIPVIAGLLIA
ALIHPIAHRFQRMGVPRLGAAFAALLIFLLLVVGAGVAVGFNAANEIPAVADQVSEGVDQVRDYLTDGPFHLSQGQIDNL
VDDIRSSITSNRGRVVSGVLSTASVAAEVLTSILVALFSTFFFLYDGERIWSWIVTRFPSGAEDRVRGAGREAWLTLTGY
IRGTVFVAAVDAVGITIGLVAVGAPLVAPLALLTFFGGFIPIVGATVAGIAAVLVALVSNGVPDALIILGVVIAVQQVEG
HLLQPLVMRRAVRLHPLAIVIALSAGGVLAGIPGAIAAVPFVAVVNRVATYLASAGKDPQPADG

Sequences:

>Translated_464_residues
MAGLGRVPVRRGPRRAAADAAADSGAAGSATPGSAGPATPGSAGSAGGPGPDGRPAPAGPRQRIPRRLRLARSGAGAGPP
EQEPRRAGAAGAGGAGGAAAGAAQGSTARRAEQHVPVSLRVASAWSWRLLIIGTAVYVLAMIVGRVRIVVIPVIAGLLIA
ALIHPIAHRFQRMGVPRLGAAFAALLIFLLLVVGAGVAVGFNAANEIPAVADQVSEGVDQVRDYLTDGPFHLSQGQIDNL
VDDIRSSITSNRGRVVSGVLSTASVAAEVLTSILVALFSTFFFLYDGERIWSWIVTRFPSGAEDRVRGAGREAWLTLTGY
IRGTVFVAAVDAVGITIGLVAVGAPLVAPLALLTFFGGFIPIVGATVAGIAAVLVALVSNGVPDALIILGVVIAVQQVEG
HLLQPLVMRRAVRLHPLAIVIALSAGGVLAGIPGAIAAVPFVAVVNRVATYLASAGKDPQPADG
>Mature_463_residues
AGLGRVPVRRGPRRAAADAAADSGAAGSATPGSAGPATPGSAGSAGGPGPDGRPAPAGPRQRIPRRLRLARSGAGAGPPE
QEPRRAGAAGAGGAGGAAAGAAQGSTARRAEQHVPVSLRVASAWSWRLLIIGTAVYVLAMIVGRVRIVVIPVIAGLLIAA
LIHPIAHRFQRMGVPRLGAAFAALLIFLLLVVGAGVAVGFNAANEIPAVADQVSEGVDQVRDYLTDGPFHLSQGQIDNLV
DDIRSSITSNRGRVVSGVLSTASVAAEVLTSILVALFSTFFFLYDGERIWSWIVTRFPSGAEDRVRGAGREAWLTLTGYI
RGTVFVAAVDAVGITIGLVAVGAPLVAPLALLTFFGGFIPIVGATVAGIAAVLVALVSNGVPDALIILGVVIAVQQVEGH
LLQPLVMRRAVRLHPLAIVIALSAGGVLAGIPGAIAAVPFVAVVNRVATYLASAGKDPQPADG

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=312, Percent_Identity=26.9230769230769, Blast_Score=79, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 46865; Mature: 46734

Theoretical pI: Translated: 11.72; Mature: 11.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGLGRVPVRRGPRRAAADAAADSGAAGSATPGSAGPATPGSAGSAGGPGPDGRPAPAGP
CCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
RQRIPRRLRLARSGAGAGPPEQEPRRAGAAGAGGAGGAAAGAAQGSTARRAEQHVPVSLR
HHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEE
VASAWSWRLLIIGTAVYVLAMIVGRVRIVVIPVIAGLLIAALIHPIAHRFQRMGVPRLGA
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
AFAALLIFLLLVVGAGVAVGFNAANEIPAVADQVSEGVDQVRDYLTDGPFHLSQGQIDNL
HHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
VDDIRSSITSNRGRVVSGVLSTASVAAEVLTSILVALFSTFFFLYDGERIWSWIVTRFPS
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
GAEDRVRGAGREAWLTLTGYIRGTVFVAAVDAVGITIGLVAVGAPLVAPLALLTFFGGFI
CHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PIVGATVAGIAAVLVALVSNGVPDALIILGVVIAVQQVEGHLLQPLVMRRAVRLHPLAIV
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
IALSAGGVLAGIPGAIAAVPFVAVVNRVATYLASAGKDPQPADG
EEECCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
AGLGRVPVRRGPRRAAADAAADSGAAGSATPGSAGPATPGSAGSAGGPGPDGRPAPAGP
CCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
RQRIPRRLRLARSGAGAGPPEQEPRRAGAAGAGGAGGAAAGAAQGSTARRAEQHVPVSLR
HHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEE
VASAWSWRLLIIGTAVYVLAMIVGRVRIVVIPVIAGLLIAALIHPIAHRFQRMGVPRLGA
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
AFAALLIFLLLVVGAGVAVGFNAANEIPAVADQVSEGVDQVRDYLTDGPFHLSQGQIDNL
HHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
VDDIRSSITSNRGRVVSGVLSTASVAAEVLTSILVALFSTFFFLYDGERIWSWIVTRFPS
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
GAEDRVRGAGREAWLTLTGYIRGTVFVAAVDAVGITIGLVAVGAPLVAPLALLTFFGGFI
CHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PIVGATVAGIAAVLVALVSNGVPDALIILGVVIAVQQVEGHLLQPLVMRRAVRLHPLAIV
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
IALSAGGVLAGIPGAIAAVPFVAVVNRVATYLASAGKDPQPADG
EEECCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]