| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317052
Identifier: 158317052
GI number: 158317052
Start: 6371098
End: 6371883
Strand: Direct
Name: 158317052
Synonym: Franean1_5296
Alternate gene names: NA
Gene position: 6371098-6371883 (Clockwise)
Preceding gene: 158317051
Following gene: 158317056
Centisome position: 70.93
GC content: 72.9
Gene sequence:
>786_bases ATGATCGACGCCTTCCGCTCCGAGTGGGTACCGCTGCTGCGCCGGCGGTTCCTGGTCGGCACTCTCGTCGCCGTCGCGGC CGTCGCCGCGCTGGGCACGGCGCTGACGATCTTCTCGGCGGGCCGCACCGACTTCGACGGCGATCCGGTGTCGGTCGCGA TGCTCGCCGCGCCGTCCGGGGTCATCGAGGGCCTGGAGGCGGTGACGATCCTGCTGGGTGTGGTGGCGCTGTCCGTCACC GCCTCGGCGATCGCCGGCGAGTACTCCCATGGGACGCTACGCAACCAGCTCGTCGCGCAGCCGCACCGGTTGCGGCTGCT GGCCGGCAAGGTGCTGGCGCTGGTGGTCTTCCTCGTGCTCGTGGTCACCGTGTCCGCGCTGGTCACGGTGGGGCTGTCGT TCGCCCTGGCGCCGTTGAACAACATCCCGACCGACGCGTGGCTGTCCCTTTCCGGGCTGGCCGAGTTCGGGAAGGGCCTG GCCAACGTGACGTTCGGCACCCTCGGCTACGCCGCCGTCGGGGCGCTCGCGGCCGTGGTGCTGCGTTCCCCCGCCGCGGC GATCGCGGTCGGGGTCGCCTACGCCCTGCCGGTCGAGATGCTGGTGTCCCGGATCTACGCCCCGGCCGGTGGGTGGCTGC CGGCGCACCTGATGGAGATCGTGGCCGTCGGCGGCAACGGGTACACGACCGCGTACTCCGCCGCGGGCGTGCGGGTGCTG GTGTTCTGCGGGCTGGCCGCGGCGGTCACGGCGGTGCTGTTCCGCCGCCGGGACGTCACCGCCTGA
Upstream 100 bases:
>100_bases CCCTGCGCTCGATCCGGACACACCGGCCGAACCTGGAGGAGACCTTCCTCAAGGCGACGGGGGACGTCGACGGTGACCTG ACGATGCGAGGTGGTGCCAC
Downstream 100 bases:
>100_bases CGACCAGGGCGCCGGCCCGCCCGCCCGTCCGACCGCACCGGAACCGCCCGGCGCGCGGGCCGGCGCTCACTCGCGGAGCA GCACGTCCAGGTTCACCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MIDAFRSEWVPLLRRRFLVGTLVAVAAVAALGTALTIFSAGRTDFDGDPVSVAMLAAPSGVIEGLEAVTILLGVVALSVT ASAIAGEYSHGTLRNQLVAQPHRLRLLAGKVLALVVFLVLVVTVSALVTVGLSFALAPLNNIPTDAWLSLSGLAEFGKGL ANVTFGTLGYAAVGALAAVVLRSPAAAIAVGVAYALPVEMLVSRIYAPAGGWLPAHLMEIVAVGGNGYTTAYSAAGVRVL VFCGLAAAVTAVLFRRRDVTA
Sequences:
>Translated_261_residues MIDAFRSEWVPLLRRRFLVGTLVAVAAVAALGTALTIFSAGRTDFDGDPVSVAMLAAPSGVIEGLEAVTILLGVVALSVT ASAIAGEYSHGTLRNQLVAQPHRLRLLAGKVLALVVFLVLVVTVSALVTVGLSFALAPLNNIPTDAWLSLSGLAEFGKGL ANVTFGTLGYAAVGALAAVVLRSPAAAIAVGVAYALPVEMLVSRIYAPAGGWLPAHLMEIVAVGGNGYTTAYSAAGVRVL VFCGLAAAVTAVLFRRRDVTA >Mature_261_residues MIDAFRSEWVPLLRRRFLVGTLVAVAAVAALGTALTIFSAGRTDFDGDPVSVAMLAAPSGVIEGLEAVTILLGVVALSVT ASAIAGEYSHGTLRNQLVAQPHRLRLLAGKVLALVVFLVLVVTVSALVTVGLSFALAPLNNIPTDAWLSLSGLAEFGKGL ANVTFGTLGYAAVGALAAVVLRSPAAAIAVGVAYALPVEMLVSRIYAPAGGWLPAHLMEIVAVGGNGYTTAYSAAGVRVL VFCGLAAAVTAVLFRRRDVTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26663; Mature: 26663
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDAFRSEWVPLLRRRFLVGTLVAVAAVAALGTALTIFSAGRTDFDGDPVSVAMLAAPSG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHH VIEGLEAVTILLGVVALSVTASAIAGEYSHGTLRNQLVAQPHRLRLLAGKVLALVVFLVL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH VVTVSALVTVGLSFALAPLNNIPTDAWLSLSGLAEFGKGLANVTFGTLGYAAVGALAAVV HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LRSPAAAIAVGVAYALPVEMLVSRIYAPAGGWLPAHLMEIVAVGGNGYTTAYSAAGVRVL HHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH VFCGLAAAVTAVLFRRRDVTA HHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIDAFRSEWVPLLRRRFLVGTLVAVAAVAALGTALTIFSAGRTDFDGDPVSVAMLAAPSG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHH VIEGLEAVTILLGVVALSVTASAIAGEYSHGTLRNQLVAQPHRLRLLAGKVLALVVFLVL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH VVTVSALVTVGLSFALAPLNNIPTDAWLSLSGLAEFGKGLANVTFGTLGYAAVGALAAVV HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LRSPAAAIAVGVAYALPVEMLVSRIYAPAGGWLPAHLMEIVAVGGNGYTTAYSAAGVRVL HHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH VFCGLAAAVTAVLFRRRDVTA HHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA