| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317036
Identifier: 158317036
GI number: 158317036
Start: 6353089
End: 6353538
Strand: Reverse
Name: 158317036
Synonym: Franean1_5280
Alternate gene names: NA
Gene position: 6353538-6353089 (Counterclockwise)
Preceding gene: 158317038
Following gene: 158317035
Centisome position: 70.74
GC content: 73.11
Gene sequence:
>450_bases ATGGACGAGGGTTCGGAGGAGCCGGAGGCGGTGCCTGCCGCGCGGCGGCGTCCACCCGGGTCGCTGGAGGAAGAGGTGCT CGGTGTGCTGCACCGCTCCGGGGAGCTCTCGCCGGGTGAGGTCCGCGATCTTCTTCCTGCCACCGCGAGGCTGTCCTACA GCGCGGTGGTCACCACTCTCACCCGCCTGCACACCAAGGGTGTGGTCACCCGTCGGCGGCACGGGCGGGGCTACATCTAC TCTGCGCCGGGGGATCCAGCCACGCTCGTCGCGTGGCGGATGAACCGGCTTCTCGCCGGGCAGGCCGATCACCGCCGCGC CCTGACGCACTTCATCGCCGCGCTCTCGCCCACCGACGAGGCGCTCGTCCGCGATCTTCTCGCCTCCGCGCCGGCCCCCG CCGAGCACGGTGAGCACGGGCGCGGCTCCGAGTCGCGCCGGCAGGGCTGA
Upstream 100 bases:
>100_bases GGAGCCGGCCGGGGCCGGCCGCCTCGTATCGTGGTCCGTGTGAGGCGGGGTGCGGACGGGCTGGTCCCGGGGCCGCGGAA GCTGCCGGGGGGCCGGTGTG
Downstream 100 bases:
>100_bases GCCCGGTGGTCGACCAACTGCTCGTATCCCTCGTCCTGGCGCCCGCGGCGGGTGTGGTGACGAGCCGCATCCTGGTCGAT CGGCTGCCCCCGCGGGTTGC
Product: CopY family transcriptional regulator
Products: NA
Alternate protein names: CopY Family Transcriptional Regulator; Penicillinase Repressor; CopY Family Transcriptional Repressor; Transcriptional Repressor
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MDEGSEEPEAVPAARRRPPGSLEEEVLGVLHRSGELSPGEVRDLLPATARLSYSAVVTTLTRLHTKGVVTRRRHGRGYIY SAPGDPATLVAWRMNRLLAGQADHRRALTHFIAALSPTDEALVRDLLASAPAPAEHGEHGRGSESRRQG
Sequences:
>Translated_149_residues MDEGSEEPEAVPAARRRPPGSLEEEVLGVLHRSGELSPGEVRDLLPATARLSYSAVVTTLTRLHTKGVVTRRRHGRGYIY SAPGDPATLVAWRMNRLLAGQADHRRALTHFIAALSPTDEALVRDLLASAPAPAEHGEHGRGSESRRQG >Mature_149_residues MDEGSEEPEAVPAARRRPPGSLEEEVLGVLHRSGELSPGEVRDLLPATARLSYSAVVTTLTRLHTKGVVTRRRHGRGYIY SAPGDPATLVAWRMNRLLAGQADHRRALTHFIAALSPTDEALVRDLLASAPAPAEHGEHGRGSESRRQG
Specific function: Unknown
COG id: COG3682
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16125; Mature: 16125
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEGSEEPEAVPAARRRPPGSLEEEVLGVLHRSGELSPGEVRDLLPATARLSYSAVVTTL CCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH TRLHTKGVVTRRRHGRGYIYSAPGDPATLVAWRMNRLLAGQADHRRALTHFIAALSPTDE HHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHH ALVRDLLASAPAPAEHGEHGRGSESRRQG HHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDEGSEEPEAVPAARRRPPGSLEEEVLGVLHRSGELSPGEVRDLLPATARLSYSAVVTTL CCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH TRLHTKGVVTRRRHGRGYIYSAPGDPATLVAWRMNRLLAGQADHRRALTHFIAALSPTDE HHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHH ALVRDLLASAPAPAEHGEHGRGSESRRQG HHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA