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The map label for this gene is 158317005

Identifier: 158317005

GI number: 158317005

Start: 6310499

End: 6311080

Strand: Reverse

Name: 158317005

Synonym: Franean1_5249

Alternate gene names: NA

Gene position: 6311080-6310499 (Counterclockwise)

Preceding gene: 158317007

Following gene: 158317003

Centisome position: 70.26

GC content: 76.29

Gene sequence:

>582_bases
GTGGCCTGGCCTGGCCAGCGGGCGGGATGGCGACGTATCGTGATCGGCGTGCCAAGGTCGGCGGCCCCGCCGGACGGGGC
GAGATGCTCCATCGCCCGCAGCCTCGAGGTGCTGGGCGAGCGGTGGACGCTGCTGGTCGTCCGCGAGGCGTTCCGCGGGC
GCACCCGCTTCGCCGAGTTCCGCGACGCGCTGGGCATTGCGACGGACGTCCTGACCGTCCGCCTGCGCACGCTGGTCGAG
GCCGGGGTGCTCGAACGCCAGGCCTACCGCGAGCCCGGGTCACGCGAGCGGTACAGCTACCACCTCACCCCGGCCGGCCA
CGACCTGCGCCTCGTGCTCGGGTCGCTGCAGCAGTGGGGCGACGCGCACCGGCCCTCCGGCCACGGTCCGGCCACGGTGT
ACCGCTCCGCGGTGGGCGGCGAGCCGGTGCGGGTGGCCTTCGTCGACAGCGCCGGGGTGGAGATCGACGTCCGCGACGTC
GTCTCCACCCCCGGGCCGGGCTGGCCCCGCATCGACGCCGGCCCGGATATCGCGCCGGCACTGACGCCGATGCCGGCCCG
GAGGCGGCCCAGCCGGCCGTGA

Upstream 100 bases:

>100_bases
CCCCGGCCAGCCTAGTGCCGCGCGCCGCGACGTTCGCCCCGTCGCCCTGTCACTCGTTGTGGCTCTGGCCGTCGGCCCCG
GGCGGGGAGGGGGAGGGGCC

Downstream 100 bases:

>100_bases
GTGTGCCGGAGGGCCGTCCGCCGGTGGACGATGCGGTGGACGGGGCTGGTCAGCCCGTCAGCGTGGCCACGGGCTCGCGC
GAGGAGTAGAGCTCGGCGAG

Product: HxlR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MAWPGQRAGWRRIVIGVPRSAAPPDGARCSIARSLEVLGERWTLLVVREAFRGRTRFAEFRDALGIATDVLTVRLRTLVE
AGVLERQAYREPGSRERYSYHLTPAGHDLRLVLGSLQQWGDAHRPSGHGPATVYRSAVGGEPVRVAFVDSAGVEIDVRDV
VSTPGPGWPRIDAGPDIAPALTPMPARRRPSRP

Sequences:

>Translated_193_residues
MAWPGQRAGWRRIVIGVPRSAAPPDGARCSIARSLEVLGERWTLLVVREAFRGRTRFAEFRDALGIATDVLTVRLRTLVE
AGVLERQAYREPGSRERYSYHLTPAGHDLRLVLGSLQQWGDAHRPSGHGPATVYRSAVGGEPVRVAFVDSAGVEIDVRDV
VSTPGPGWPRIDAGPDIAPALTPMPARRRPSRP
>Mature_192_residues
AWPGQRAGWRRIVIGVPRSAAPPDGARCSIARSLEVLGERWTLLVVREAFRGRTRFAEFRDALGIATDVLTVRLRTLVEA
GVLERQAYREPGSRERYSYHLTPAGHDLRLVLGSLQQWGDAHRPSGHGPATVYRSAVGGEPVRVAFVDSAGVEIDVRDVV
STPGPGWPRIDAGPDIAPALTPMPARRRPSRP

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 21126; Mature: 20995

Theoretical pI: Translated: 11.43; Mature: 11.43

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWPGQRAGWRRIVIGVPRSAAPPDGARCSIARSLEVLGERWTLLVVREAFRGRTRFAEF
CCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHEEHHHHHCCHHHHHHH
RDALGIATDVLTVRLRTLVEAGVLERQAYREPGSRERYSYHLTPAGHDLRLVLGSLQQWG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHC
DAHRPSGHGPATVYRSAVGGEPVRVAFVDSAGVEIDVRDVVSTPGPGWPRIDAGPDIAPA
CCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCEEEHHHHHCCCCCCCCCCCCCCCCCCC
LTPMPARRRPSRP
CCCCCCCCCCCCC
>Mature Secondary Structure 
AWPGQRAGWRRIVIGVPRSAAPPDGARCSIARSLEVLGERWTLLVVREAFRGRTRFAEF
CCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHEEHHHHHCCHHHHHHH
RDALGIATDVLTVRLRTLVEAGVLERQAYREPGSRERYSYHLTPAGHDLRLVLGSLQQWG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHC
DAHRPSGHGPATVYRSAVGGEPVRVAFVDSAGVEIDVRDVVSTPGPGWPRIDAGPDIAPA
CCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCEEEHHHHHCCCCCCCCCCCCCCCCCCC
LTPMPARRRPSRP
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]