Click here to switch to the map view.

The map label for this gene is ybeB [H]

Identifier: 158317002

GI number: 158317002

Start: 6308148

End: 6308582

Strand: Reverse

Name: ybeB [H]

Synonym: Franean1_5246

Alternate gene names: 158317002

Gene position: 6308582-6308148 (Counterclockwise)

Preceding gene: 158317003

Following gene: 158317001

Centisome position: 70.24

GC content: 71.95

Gene sequence:

>435_bases
GTGACCGCTTCACCGCGAGCCACCGAGCTCGCCCTCGCCGCCGCCCAGGCCGCCGCCGACAAGATCGCCCAGGACATTCT
GATCCTCGACGTGAGCGAGCGGCTGACGATCACCGACTGCTTCGTCATCGCGTCGGCCGAGAACGAGCGGCAGGTCAAGG
CCGCCGTCGACGAGATCGAGGAGAAGCTGCGGGCCATGGGGGCCAAGCCGTTGCGCCGCGAGGGCGAGCGCGAGGGCCGG
TGGGTCCTGCTCGACTTCGCCGACATCGTCGTGCACGTGCTGCGCGCCGAGGAACGGGTCTACTACAGCCTCGAACGGCT
GTGGAAGGACTGCCCGGTCATCCCGTTCGTGGACGCCACCGTCGGCGCCGGGGTGGCCGCCGCGGCCACGGGTGGCGTGG
CGGGCGGGGGCGGCGGTACGGCAGAACCGCGGTGA

Upstream 100 bases:

>100_bases
CGGCCGGCGCTCCCGCCGGGGTGCTCCGATCGGGCGGTGTCAACGCCTGCTCGGGCGTCCCGCCGGAACGCGCACCTACC
TGCCTTGGAGACCGACCAGC

Downstream 100 bases:

>100_bases
GGCTGCTGCTCTGGCGGCACGGGCGGACGTCCTGGAACGACGCGGGGCGGTTCCAGGGCCACGCCGATCCTTCCCTGGAC
TTGACCGGTCAGCGGCAGGC

Product: iojap-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MTASPRATELALAAAQAAADKIAQDILILDVSERLTITDCFVIASAENERQVKAAVDEIEEKLRAMGAKPLRREGEREGR
WVLLDFADIVVHVLRAEERVYYSLERLWKDCPVIPFVDATVGAGVAAAATGGVAGGGGGTAEPR

Sequences:

>Translated_144_residues
MTASPRATELALAAAQAAADKIAQDILILDVSERLTITDCFVIASAENERQVKAAVDEIEEKLRAMGAKPLRREGEREGR
WVLLDFADIVVHVLRAEERVYYSLERLWKDCPVIPFVDATVGAGVAAAATGGVAGGGGGTAEPR
>Mature_143_residues
TASPRATELALAAAQAAADKIAQDILILDVSERLTITDCFVIASAENERQVKAAVDEIEEKLRAMGAKPLRREGEREGRW
VLLDFADIVVHVLRAEERVYYSLERLWKDCPVIPFVDATVGAGVAAAATGGVAGGGGGTAEPR

Specific function: Unknown

COG id: COG0799

COG function: function code S; Uncharacterized homolog of plant Iojap protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Iojap family [H]

Homologues:

Organism=Escherichia coli, GI87081768, Length=85, Percent_Identity=41.1764705882353, Blast_Score=81, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004394 [H]

Pfam domain/function: PF02410 DUF143 [H]

EC number: NA

Molecular weight: Translated: 15347; Mature: 15215

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASPRATELALAAAQAAADKIAQDILILDVSERLTITDCFVIASAENERQVKAAVDEIE
CCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEEEEEECCCCHHHHHHHHHHHH
EKLRAMGAKPLRREGEREGRWVLLDFADIVVHVLRAEERVYYSLERLWKDCPVIPFVDAT
HHHHHCCCCCHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCH
VGAGVAAAATGGVAGGGGGTAEPR
HCCCHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TASPRATELALAAAQAAADKIAQDILILDVSERLTITDCFVIASAENERQVKAAVDEIE
CCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEEEEEECCCCHHHHHHHHHHHH
EKLRAMGAKPLRREGEREGRWVLLDFADIVVHVLRAEERVYYSLERLWKDCPVIPFVDAT
HHHHHCCCCCHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCH
VGAGVAAAATGGVAGGGGGTAEPR
HCCCHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]