| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316994
Identifier: 158316994
GI number: 158316994
Start: 6293176
End: 6294270
Strand: Reverse
Name: 158316994
Synonym: Franean1_5238
Alternate gene names: NA
Gene position: 6294270-6293176 (Counterclockwise)
Preceding gene: 158316995
Following gene: 158316993
Centisome position: 70.08
GC content: 74.79
Gene sequence:
>1095_bases ATGAGCCCGCCGGGCGGATCAGGACTCGGCGGCGACTGGTGGGATGCCAGCCCCCGCCCCGGCCGCGGCGACACCGACCT GCACCGGACCAGCCGCGGCGAGCCGATCGACACCTTGCGCGAGGAGACCATCGCGTATCGTGACGTCTATGGACGCCGCC GGACGATGCGGGCCCGGGTCACCGAGGACGACCCGGCGGCCGACCCGTTCTACCGGACCAGGCTGGTCGTCGATGCCGAC CGGCTGGTCGAGTACGTCCAGAAGCGGGTGCACGCCGCCGGGCGGCGTGCACCCGCGAACTCCGCCGCGACCTCGCGGGC GCCGGACGGGATCGACGCCGTCGACAACGAGATCCAGATGGGCCTGCACCTCGTCGACGCGTTCGGCGAGGAGAACTACC CGCGGGAGCTGTCCCACCTGGTCGGCTACTACCCCGACGACGCCGACCGCGAGCCGTTCGTGCTGCTGGCCGAGCGCGGC CGGCCGGTCGAGCGGTTCGCCGGCCGGCTGCTGCTCGACCAGGTCGAGCAGTTCCCGACCAGCCTGCTGCGCGCGCTGGA CCTGCTGGAGTCCGCCGGCGTCGTGCACCGCTGGCTGACCACCCGGACGGTCCAGTTCGACGACCGGCACGTCCAGATCA CCGACTTCCGGCACGCGGTGCTCGTCGGTGAGCGCTGCGGCCCGGCGCCCGACCCGCGGTGGGCGGCACCCGAGGCGGTG TACGGCGACGGGCCGGCCACGACGAAGGAAGACGTCTACAGCGTCGGCCGCGTCCTCAACGAGGTGATCGCCGACCGGTC CGGCCGGGCCTCGACGCGCCGCGGTGGGGCTGAGCGGCTGCTGGGATCGGACGGCCCGCTCGGCCGGATGGTCGACCACG ATCCGGACCTGCGCCCACCGGCCGCCGAGGTACTGGCCGCCCTCGGTCGGGACGTCGACCGGGCGGCCGGCACCCGGCGC GCCAGGTCGGGCGGCGACGCCCGGTTCGTCGAGGGACTGCGCAGCTTCGACGCGATCGTGCGGCGGCGGGGGACCGGCGA CGACGAGCCGACGCCGCGTCCTACGAACGGCGGCGCGGACCGCGGAAGGCGATGA
Upstream 100 bases:
>100_bases TCGGCGAGCTGGAATGGCCGGAGTGGGGCCAGGTCGCCGGAGTGCTGCGGCTGGTGCGGATGCGCCCCGGCACGGTGGAG ACCGTGCTCAAGGGGGGGCG
Downstream 100 bases:
>100_bases GCGCGGTGACCATCCCACTGGGACCGACCGAGGTGCGCTGCCCGATCTGCCTGGACGTCTTCGACTGGGACGAGACGGAC CTGTTCACCTTCCGGGACGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MSPPGGSGLGGDWWDASPRPGRGDTDLHRTSRGEPIDTLREETIAYRDVYGRRRTMRARVTEDDPAADPFYRTRLVVDAD RLVEYVQKRVHAAGRRAPANSAATSRAPDGIDAVDNEIQMGLHLVDAFGEENYPRELSHLVGYYPDDADREPFVLLAERG RPVERFAGRLLLDQVEQFPTSLLRALDLLESAGVVHRWLTTRTVQFDDRHVQITDFRHAVLVGERCGPAPDPRWAAPEAV YGDGPATTKEDVYSVGRVLNEVIADRSGRASTRRGGAERLLGSDGPLGRMVDHDPDLRPPAAEVLAALGRDVDRAAGTRR ARSGGDARFVEGLRSFDAIVRRRGTGDDEPTPRPTNGGADRGRR
Sequences:
>Translated_364_residues MSPPGGSGLGGDWWDASPRPGRGDTDLHRTSRGEPIDTLREETIAYRDVYGRRRTMRARVTEDDPAADPFYRTRLVVDAD RLVEYVQKRVHAAGRRAPANSAATSRAPDGIDAVDNEIQMGLHLVDAFGEENYPRELSHLVGYYPDDADREPFVLLAERG RPVERFAGRLLLDQVEQFPTSLLRALDLLESAGVVHRWLTTRTVQFDDRHVQITDFRHAVLVGERCGPAPDPRWAAPEAV YGDGPATTKEDVYSVGRVLNEVIADRSGRASTRRGGAERLLGSDGPLGRMVDHDPDLRPPAAEVLAALGRDVDRAAGTRR ARSGGDARFVEGLRSFDAIVRRRGTGDDEPTPRPTNGGADRGRR >Mature_363_residues SPPGGSGLGGDWWDASPRPGRGDTDLHRTSRGEPIDTLREETIAYRDVYGRRRTMRARVTEDDPAADPFYRTRLVVDADR LVEYVQKRVHAAGRRAPANSAATSRAPDGIDAVDNEIQMGLHLVDAFGEENYPRELSHLVGYYPDDADREPFVLLAERGR PVERFAGRLLLDQVEQFPTSLLRALDLLESAGVVHRWLTTRTVQFDDRHVQITDFRHAVLVGERCGPAPDPRWAAPEAVY GDGPATTKEDVYSVGRVLNEVIADRSGRASTRRGGAERLLGSDGPLGRMVDHDPDLRPPAAEVLAALGRDVDRAAGTRRA RSGGDARFVEGLRSFDAIVRRRGTGDDEPTPRPTNGGADRGRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40111; Mature: 39980
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: PS50011 PROTEIN_KINASE_DOM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPPGGSGLGGDWWDASPRPGRGDTDLHRTSRGEPIDTLREETIAYRDVYGRRRTMRARV CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC TEDDPAADPFYRTRLVVDADRLVEYVQKRVHAAGRRAPANSAATSRAPDGIDAVDNEIQM CCCCCCCCCHHHHEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH GLHLVDAFGEENYPRELSHLVGYYPDDADREPFVLLAERGRPVERFAGRLLLDQVEQFPT HHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH SLLRALDLLESAGVVHRWLTTRTVQFDDRHVQITDFRHAVLVGERCGPAPDPRWAAPEAV HHHHHHHHHHHCCHHHHHHHHEEEEECCCEEEEECHHHHHHCCCCCCCCCCCCCCCCCCC YGDGPATTKEDVYSVGRVLNEVIADRSGRASTRRGGAERLLGSDGPLGRMVDHDPDLRPP CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHCCCCCCCCCCCCCCCCCCCC AAEVLAALGRDVDRAAGTRRARSGGDARFVEGLRSFDAIVRRRGTGDDEPTPRPTNGGAD HHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC RGRR CCCC >Mature Secondary Structure SPPGGSGLGGDWWDASPRPGRGDTDLHRTSRGEPIDTLREETIAYRDVYGRRRTMRARV CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC TEDDPAADPFYRTRLVVDADRLVEYVQKRVHAAGRRAPANSAATSRAPDGIDAVDNEIQM CCCCCCCCCHHHHEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH GLHLVDAFGEENYPRELSHLVGYYPDDADREPFVLLAERGRPVERFAGRLLLDQVEQFPT HHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH SLLRALDLLESAGVVHRWLTTRTVQFDDRHVQITDFRHAVLVGERCGPAPDPRWAAPEAV HHHHHHHHHHHCCHHHHHHHHEEEEECCCEEEEECHHHHHHCCCCCCCCCCCCCCCCCCC YGDGPATTKEDVYSVGRVLNEVIADRSGRASTRRGGAERLLGSDGPLGRMVDHDPDLRPP CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHCCCCCCCCCCCCCCCCCCCC AAEVLAALGRDVDRAAGTRRARSGGDARFVEGLRSFDAIVRRRGTGDDEPTPRPTNGGAD HHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC RGRR CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA